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LC597490.1__BCO16179.1__X__00126
Bact-VirLC597490.1__BCO16179.1__X__00126
Identity
- Accession:
- LC597490 ↗
- Kingdom:
- phage
Quality
72.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-86
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 45.0 | 4.54e-01 | 100.0% | 92.2% |
| 2vkhA03 | 1.10.10.1780 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.56 | 46.0 | 4.52e-01 | 93.7% | 95.7% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 43.0 | 4.15e-01 | 87.3% | 82.7% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 45.0 | 4.29e-01 | 92.1% | 82.9% |
| 3mhsB00 | 1.10.246.140 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › ENY2/SUS1 | 0.56 | 49.0 | 4.38e-01 | 100.0% | 90.1% |
| 1uaaA02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.54 | 47.0 | 4.52e-01 | 98.4% | 91.9% |
| 2pkeA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 45.0 | 4.23e-01 | 96.8% | 100.0% |
| 1aueB00 | 1.20.120.150 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › FKBP12-rapamycin binding domain | 0.52 | 38.0 | 3.33e-01 | 100.0% | 52.1% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 39.0 | 3.88e-01 | 100.0% | 76.9% |
| 3dcfA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 36.0 | 2.91e-01 | 77.8% | 54.9% |
| 4y5jA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.51 | 40.0 | 2.81e-01 | 90.5% | 34.4% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.51 | 38.0 | 3.42e-01 | 98.4% | 56.7% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3593566 | 101.1.11.145 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › F-box | 0.74 | 52.0 | 5.23e-01 | 76.2% | 72.3% |
| 3725855 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.68 | 47.0 | 4.66e-01 | 82.5% | 69.2% |
| 4938670 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.67 | 42.0 | 3.96e-01 | 100.0% | 53.3% |
| 3689952 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.63 | 47.0 | 3.35e-01 | 81.0% | 27.9% |
| 3483768 | 176.1.1.0 ↗ | alpha arrays › Annexin › Annexin › Annexin | 0.59 | 42.0 | 3.80e-01 | 82.5% | 54.4% |
| 3253943 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.58 | 39.0 | 3.96e-01 | 100.0% | 67.7% |
| 4008944 | 1151.1.1.0 ↗ | alpha bundles › Helical membrane domain in lipooligosaccharide phosphoethanolamine transferase A › Helical membrane domain in lipooligosaccharide phosphoethanolamine transferase A › Helical membrane domain in lipooligosaccharide phosphoethanolamine transferase A | 0.58 | 46.0 | 3.36e-01 | 87.3% | 57.1% |
| 4032822 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.57 | 48.0 | 3.82e-01 | 98.4% | 65.7% |
| 4545023 | 101.1.1.297 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_NPRL3 | 0.55 | 45.0 | 4.06e-01 | 96.8% | 74.7% |
| 5070038 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 47.0 | 4.08e-01 | 98.4% | 67.0% |
| 4816472 | 5073.1.1.0 ↗ | alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M | 0.53 | 43.0 | 3.47e-01 | 100.0% | 46.6% |
| 3494116 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.52 | 46.0 | 3.21e-01 | 100.0% | 70.7% |
| 5016327 | 605.1.1.2 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › H-kinase_dim | 0.51 | 41.0 | 3.99e-01 | 100.0% | 78.6% |
| 3590942 | 2004.1.1.49 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase | 0.51 | 42.0 | 2.81e-01 | 95.2% | 81.8% |
| 3580280 | 604.1.1.192 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF26998 | 0.50 | 40.0 | 3.51e-01 | 98.4% | 57.9% |
| 5062874 | 2004.1.1.343 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 | 0.50 | 42.0 | 3.04e-01 | 100.0% | 53.5% |