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LC597490.1__BCO16289.1__X__00236
Bact-VirLC597490.1__BCO16289.1__X__00236
Identity
- Accession:
- LC597490 ↗
- Kingdom:
- phage
Quality
89.6
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 219-299
Domain cluster:
rep: IMGVR_UViG_3300008004_000605-3300008004-Ga0100395_100035234__D688-761
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17657.7 best | DNA_pol3_finger | 56.0 | 4.20e-15 | 80.2% | 35.5% |
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4eqqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 39.0 | 4.99e-01 | 100.0% | 97.9% |
| 5ysmA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.62 | 55.0 | 3.58e-01 | 100.0% | 32.4% |
| 4l8iB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.62 | 43.0 | 3.87e-01 | 71.6% | 85.7% |
| 2janA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.61 | 45.0 | 4.25e-01 | 79.0% | 85.1% |
| 3mgxB00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.60 | 52.0 | 3.42e-01 | 100.0% | 34.5% |
| 3sqiA01 | 1.10.150.540 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.59 | 41.0 | 3.88e-01 | 90.1% | 59.6% |
| 3egoA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.59 | 44.0 | 3.87e-01 | 100.0% | 53.7% |
| 3r64A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.58 | 51.0 | 3.46e-01 | 96.3% | 67.7% |
| 4l0fA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.58 | 50.0 | 3.22e-01 | 100.0% | 31.4% |
| 3aq5A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 53.0 | 4.64e-01 | 100.0% | 94.0% |
| 5kf6A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.57 | 51.0 | 3.57e-01 | 98.8% | 70.2% |
| 1dlwA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.57 | 52.0 | 4.58e-01 | 100.0% | 94.0% |
| 2ew2A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.57 | 44.0 | 3.77e-01 | 100.0% | 51.5% |
| 2lmgA00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.56 | 38.0 | 3.99e-01 | 70.4% | 95.9% |
| 3fbzA01 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 47.0 | 4.40e-01 | 93.8% | 77.5% |
| 3nhiA01 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.55 | 43.0 | 3.64e-01 | 88.9% | 84.6% |
| 3tacB01 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.54 | 45.0 | 3.96e-01 | 93.8% | 64.6% |
| 3hwrA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.54 | 41.0 | 3.60e-01 | 84.0% | 66.7% |
| 4d0nB01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.53 | 44.0 | 3.27e-01 | 96.3% | 73.5% |
| 2xkrA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.53 | 46.0 | 3.02e-01 | 100.0% | 34.4% |
| 2pkeA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 40.0 | 4.14e-01 | 82.7% | 93.6% |
| 2p0tA02 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.53 | 39.0 | 4.11e-01 | 80.2% | 91.7% |
| 6bldA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.51 | 45.0 | 2.89e-01 | 100.0% | 33.6% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4093848 | 3584.1.1.1 ↗ | alpha arrays › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA_pol3_finger | 0.90 | 84.0 | 6.05e-01 | 100.0% | 39.0% |
| 4522025 | 3584.1.1.1 ↗ | alpha arrays › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA_pol3_finger | 0.86 | 78.0 | 5.70e-01 | 100.0% | 39.0% |
| 4411663 | 3584.1.1.1 ↗ | alpha arrays › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA_pol3_finger | 0.86 | 78.0 | 5.51e-01 | 100.0% | 34.9% |
| 4096085 | 3584.1.1.1 ↗ | alpha arrays › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA_pol3_finger | 0.85 | 72.0 | 5.23e-01 | 100.0% | 35.2% |
| 3969382 | 3584.1.1.0 ↗ | alpha arrays › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA polymerase III finger domain | 0.84 | 76.0 | 5.55e-01 | 100.0% | 39.5% |
| 4158759 | 3584.1.1.1 ↗ | alpha arrays › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA_pol3_finger | 0.82 | 75.0 | 5.34e-01 | 100.0% | 36.1% |
| 5054529 | 102.1.3.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain | 0.71 | 60.0 | 5.22e-01 | 95.1% | 76.0% |
| 4015442 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.61 | 46.0 | 4.78e-01 | 79.0% | 90.7% |
| 3788880 | 3615.1.1.34 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Mmc1_C | 0.58 | 44.0 | 3.13e-01 | 84.0% | 98.5% |
| 3736644 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.57 | 44.0 | 4.54e-01 | 80.2% | 97.3% |
| 3798329 | 3919.1.1.0 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 | 0.52 | 46.0 | 4.18e-01 | 100.0% | 86.4% |
| 3480939 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.50 | 41.0 | 3.02e-01 | 90.1% | 87.7% |
D2
medium
residues 1-62
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07733.19 best | DNA_pol3_alpha | 24.0 | 3.90e-05 | 100.0% | 23.8% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hpiA03 | 1.10.10.1600 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Bacterial DNA polymerase III alpha subunit, thumb domain | 0.87 | 79.0 | 7.52e-01 | 100.0% | 84.5% |
| 2hnhA03 | 1.10.10.1600 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Bacterial DNA polymerase III alpha subunit, thumb domain | 0.86 | 79.0 | 7.26e-01 | 100.0% | 80.8% |
| 3gpvA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.76 | 52.0 | 4.20e-01 | 87.1% | 38.9% |
| 5zorA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.60 | 45.0 | 4.34e-01 | 82.3% | 69.9% |
| 2ivxB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.58 | 48.0 | 4.03e-01 | 96.8% | 63.5% |
| 3hjeA03 | 1.10.150.200 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Maltooligosyl trehalose synthase; domain 3 | 0.57 | 48.0 | 4.37e-01 | 100.0% | 73.6% |
| 2d05A02 | 1.20.141.10 | Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 | 0.57 | 48.0 | 4.07e-01 | 100.0% | 61.3% |
| 1wlmA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.55 | 45.0 | 3.96e-01 | 98.4% | 73.8% |
| 1ctfA00 | 3.30.1390.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS | 0.55 | 40.0 | 3.98e-01 | 100.0% | 73.5% |
| 3p3lA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.54 | 44.0 | 2.79e-01 | 98.4% | 61.3% |
| 2fnaA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.54 | 35.0 | 3.32e-01 | 83.9% | 52.6% |
| 1c3cA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.54 | 44.0 | 4.02e-01 | 96.8% | 74.7% |
| 7ml0M01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.54 | 44.0 | 4.12e-01 | 96.8% | 84.1% |
| 4i5lB01 | 1.10.238.230 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.52 | 37.0 | 3.30e-01 | 83.9% | 49.0% |
| 1aj3A00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 38.0 | 3.35e-01 | 82.3% | 89.8% |
| 1zkeA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 37.0 | 3.45e-01 | 98.4% | 60.5% |
| 1ej5A00 | 3.90.810.10 | Alpha Beta › Alpha-Beta Complex › SerineThreonine-protein kinase PAK-alpha; Chain A › CRIB domain | 0.51 | 38.0 | 3.24e-01 | 82.3% | 83.2% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1117589 | 316.1.1.17 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol3_alpha | 0.87 | 79.0 | 4.85e-01 | 100.0% | 19.0% |
| 4501711 | 101.1.1.68 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 | 0.65 | 44.0 | 4.28e-01 | 71.0% | 77.1% |
| 3874689 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.63 | 45.0 | 3.81e-01 | 79.0% | 43.6% |
| 3701326 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.63 | 46.0 | 4.10e-01 | 82.3% | 52.6% |
| 4255639 | 102.3.1.1 ↗ | alpha arrays › HhH/H2TH › eIF2alpha middle domain › eIF2alpha middle domain › EIF_2_alpha | 0.62 | 54.0 | 4.95e-01 | 100.0% | 74.1% |
| 3886518 | 108.1.1.97 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 | 0.62 | 46.0 | 4.39e-01 | 82.3% | 69.3% |
| 5056423 | 102.3.1.1 ↗ | alpha arrays › HhH/H2TH › eIF2alpha middle domain › eIF2alpha middle domain › EIF_2_alpha | 0.62 | 53.0 | 4.88e-01 | 100.0% | 75.3% |
| 3651470 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.62 | 46.0 | 3.67e-01 | 80.6% | 38.5% |
| 3764267 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.61 | 42.0 | 3.83e-01 | 74.2% | 56.7% |
| 3218595 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.61 | 47.0 | 3.35e-01 | 87.1% | 77.9% |
| 5079736 | 102.3.1.1 ↗ | alpha arrays › HhH/H2TH › eIF2alpha middle domain › eIF2alpha middle domain › EIF_2_alpha | 0.60 | 51.0 | 4.90e-01 | 100.0% | 84.0% |
| 3245365 | 108.1.1.73 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 | 0.60 | 45.0 | 3.44e-01 | 87.1% | 65.3% |
| 4143671 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.60 | 45.0 | 3.80e-01 | 85.5% | 67.0% |
| 3791538 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.60 | 44.0 | 3.74e-01 | 83.9% | 46.4% |
| 3796793 | 108.1.1.26 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5 | 0.59 | 44.0 | 4.11e-01 | 83.9% | 63.7% |
| 3617285 | 108.1.1.29 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 | 0.58 | 45.0 | 4.20e-01 | 90.3% | 76.5% |
| 3693465 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.58 | 45.0 | 3.71e-01 | 87.1% | 90.0% |
| 3872908 | 108.1.1.12 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › p25-alpha | 0.58 | 48.0 | 4.16e-01 | 98.4% | 72.4% |
| 3624123 | 108.1.1.101 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_7, EF-hand_8 | 0.57 | 43.0 | 4.20e-01 | 83.9% | 74.3% |
| 4029664 | 108.1.1.12 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › p25-alpha | 0.57 | 46.0 | 4.18e-01 | 98.4% | 75.8% |
| 3857124 | 108.1.1.12 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › p25-alpha | 0.56 | 47.0 | 3.69e-01 | 98.4% | 51.7% |
| 3543149 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.56 | 40.0 | 4.14e-01 | 80.6% | 87.3% |
| 3738468 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.53 | 38.0 | 3.47e-01 | 83.9% | 54.4% |
| 4951196 | 3290.1.1.1 ↗ | alpha complex topology › Cytosolic helical domain in ferrous iron transport protein B › Cytosolic helical domain in ferrous iron transport protein B › Cytosolic helical domain in ferrous iron transport protein B › FeoB_Cyto | 0.52 | 44.0 | 4.20e-01 | 100.0% | 85.3% |
| 4023942 | 308.1.1.1 ↗ | a+b two layers › ClpS-like › ClpS-related › ClpS-related › Ribosomal_L12 | 0.52 | 36.0 | 3.38e-01 | 100.0% | 57.5% |
| 3407527 | 108.1.1.39 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › P2R3B_EF-hand | 0.51 | 36.0 | 3.35e-01 | 80.6% | 57.6% |
| 4505595 | 605.6.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › HP1531-like › HP1531-like | 0.51 | 41.0 | 3.65e-01 | 96.8% | 75.0% |
| 4955409 | 101.1.2.554 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF30184 | 0.50 | 42.0 | 3.02e-01 | 100.0% | 38.2% |
D3
medium
residues 74-114
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07733.19 best | DNA_pol3_alpha | 28.4 | 1.80e-06 | 100.0% | 16.2% |
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xfvA00 | 3.10.260.30 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › | 0.61 | 46.0 | 3.60e-01 | 92.7% | 72.2% |
| 7npaA02 | 3.30.70.3340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 49.0 | 4.05e-01 | 100.0% | 89.4% |
| 2o7iA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.58 | 39.0 | 2.45e-01 | 70.7% | 37.8% |
| 5xuhA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.56 | 43.0 | 3.20e-01 | 92.7% | 98.4% |
| 5xukA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.53 | 39.0 | 3.05e-01 | 90.2% | 100.0% |
| 4yy8B01 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.53 | 38.0 | 3.39e-01 | 92.7% | 62.8% |
| 3g1wA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 38.0 | 2.69e-01 | 82.9% | 33.8% |
| 1jphA00 | 3.20.20.210 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.52 | 39.0 | 2.40e-01 | 92.7% | 24.6% |
| 2vx3C02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.52 | 39.0 | 2.51e-01 | 90.2% | 18.3% |
| 4makB00 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 42.0 | 3.61e-01 | 100.0% | 75.0% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 38.0 | 3.31e-01 | 87.8% | 80.6% |
| 2gatA00 | 3.30.50.10 | Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A | 0.50 | 38.0 | 3.36e-01 | 87.8% | 62.1% |
| 3tm4A01 | 3.30.2130.30 | Alpha Beta › 2-Layer Sandwich › VC0802-like › | 0.50 | 39.0 | 2.69e-01 | 100.0% | 41.3% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1117589 | 316.1.1.17 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol3_alpha | 0.89 | 79.0 | 4.62e-01 | 100.0% | 13.0% |
| 4064450 | 316.1.1.17 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DNA_pol3_alpha | 0.85 | 73.0 | 4.41e-01 | 100.0% | 15.2% |
| 4957076 | 101.1.9.134 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF2067 | 0.61 | 43.0 | 4.06e-01 | 87.8% | 86.7% |
| 3809897 | 376.1.1.8 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box | 0.60 | 41.0 | 3.94e-01 | 70.7% | 58.0% |
| 3737606 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.59 | 40.0 | 3.93e-01 | 70.7% | 64.4% |
| 3813302 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.59 | 40.0 | 3.40e-01 | 70.7% | 40.0% |
| 3315810 | 376.1.1.40 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_11 | 0.58 | 39.0 | 3.91e-01 | 70.7% | 68.9% |
| 4944400 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 45.0 | 3.89e-01 | 87.8% | 68.6% |
| 3892614 | 376.1.1.100 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PF26148 | 0.56 | 38.0 | 3.08e-01 | 70.7% | 31.1% |
| None | — | 0.55 | 37.0 | 3.36e-01 | 70.7% | 61.7% | |
| 3417355 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.54 | 37.0 | 3.69e-01 | 70.7% | 64.4% |
| 3422289 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.53 | 35.0 | 2.58e-01 | 70.7% | 50.8% |
| 4486101 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 37.0 | 2.86e-01 | 87.8% | 54.4% |
| 4974773 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.50 | 37.0 | 2.36e-01 | 90.2% | 14.0% |