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LC597490.1__BCO16299.1__X__00246

Bact-Vir

LC597490.1__BCO16299.1__X__00246

Identity

Accession:
LC597490 ↗
Kingdom:
phage

Quality

85.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bacillus_phage_vB_BceM_WH1

TaxID: 2795294

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-77
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.83 60.0 6.78e-01 84.5% 100.0%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 56.0 6.34e-01 85.9% 98.1%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 55.0 6.09e-01 85.9% 93.0%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.74 52.0 5.10e-01 88.7% 67.5%
7k9cA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 52.0 4.85e-01 87.3% 60.5%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 55.0 5.55e-01 88.7% 80.3%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 55.0 6.00e-01 85.9% 98.3%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 59.0 5.88e-01 91.5% 90.5%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 56.0 5.49e-01 88.7% 81.3%
1v1cA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 56.0 5.74e-01 88.7% 97.1%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 53.0 5.77e-01 84.5% 100.0%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 55.0 5.69e-01 85.9% 92.4%
2rqtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 53.0 5.60e-01 87.3% 98.4%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 51.0 5.14e-01 85.9% 82.9%
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 49.0 5.02e-01 81.7% 80.0%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 48.0 4.57e-01 88.7% 66.3%
3pieB05 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 47.0 4.89e-01 83.1% 84.4%
2kymA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 52.0 4.78e-01 90.1% 67.7%
2ke9A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 50.0 5.14e-01 85.9% 94.0%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 53.0 5.18e-01 91.5% 88.2%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 48.0 5.00e-01 90.1% 95.3%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.61 49.0 3.92e-01 94.4% 43.0%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 46.0 4.38e-01 85.9% 70.2%
1t0hA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 43.0 3.97e-01 78.9% 65.6%
4p4mA02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.56 40.0 3.43e-01 76.1% 89.6%
3uxuA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.54 39.0 3.16e-01 80.3% 37.1%
2pbfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 39.0 2.86e-01 81.7% 76.1%
3zxfA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 38.0 3.22e-01 84.5% 88.9%
2lc4A00 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.51 36.0 3.20e-01 77.5% 72.1%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3774821 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 57.0 6.20e-01 85.9% 88.3%
3712672 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 64.0 6.15e-01 85.9% 96.2%
3348456 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.79 57.0 6.16e-01 85.9% 90.0%
4208181 4.1.1.70 ↗ beta barrels › SH3 › SH3 › SH3 › Tsr0524-like 0.78 64.0 6.67e-01 87.3% 93.8%
3820066 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 56.0 6.01e-01 84.5% 88.3%
3723465 4.1.1.5 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L14e 0.78 57.0 4.39e-01 87.3% 37.2%
3784140 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 52.0 5.78e-01 83.1% 92.7%
3926207 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 50.0 5.69e-01 83.1% 94.3%
4888987 4.1.1.6 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C 0.74 56.0 5.72e-01 88.7% 82.6%
3508319 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 51.0 5.33e-01 87.3% 81.5%
3898370 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 55.0 5.98e-01 84.5% 100.0%
4293453 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 53.0 5.13e-01 90.1% 71.2%
3503332 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 54.0 5.61e-01 81.7% 98.5%
531 4.1.1.281 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_KALRN 0.70 59.0 5.88e-01 91.5% 90.5%
3623785 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.70 56.0 5.53e-01 85.9% 81.3%
3707929 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 56.0 4.21e-01 85.9% 43.8%
3561094 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 62.0 6.14e-01 100.0% 96.0%
4218488 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 58.0 5.57e-01 94.4% 81.2%
3879132 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 60.0 5.92e-01 95.8% 94.7%
4002679 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.69 62.0 5.16e-01 98.6% 87.5%
3333322 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.69 53.0 4.26e-01 88.7% 43.0%
3819340 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.69 62.0 5.13e-01 98.6% 79.2%
3607307 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.69 58.0 5.92e-01 94.4% 95.7%
3698280 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 54.0 4.85e-01 88.7% 61.0%
3555931 4.1.1.322 ↗ beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.68 62.0 5.20e-01 98.6% 82.6%
3482680 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 56.0 5.79e-01 88.7% 96.9%
3936225 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 58.0 5.89e-01 100.0% 97.1%
3999507 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 54.0 5.52e-01 88.7% 92.9%
4683371 4.1.1.252 ↗ beta barrels › SH3 › SH3 › SH3 › MdcG_N 0.67 54.0 5.15e-01 88.7% 94.1%
3210707 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.67 53.0 5.69e-01 84.5% 100.0%
3290564 4.1.1.292 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Rv2311 0.67 54.0 5.00e-01 87.3% 74.4%
3938415 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 54.0 5.60e-01 87.3% 98.5%
3566631 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 55.0 5.31e-01 93.0% 80.0%
3613205 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.66 55.0 3.74e-01 91.5% 31.0%
2106277 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.65 54.0 4.44e-01 88.7% 58.9%
3631298 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 55.0 5.49e-01 95.8% 89.3%
2521867 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 52.0 4.66e-01 90.1% 62.2%
3924760 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 53.0 4.90e-01 91.5% 71.1%
160765 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 53.0 5.22e-01 91.5% 89.6%
3494765 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.63 56.0 3.96e-01 100.0% 43.2%
3787441 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.60 51.0 4.81e-01 100.0% 80.0%
3699834 9.2.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin 0.59 39.0 3.36e-01 70.4% 92.8%
3866571 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.57 46.0 2.85e-01 91.5% 18.9%
3966988 2005.1.1.10 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF 0.56 50.0 3.44e-01 100.0% 56.0%
3975862 220.1.1.104 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Cpta_toxin 0.56 42.0 4.07e-01 83.1% 96.2%
3895924 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.54 39.0 3.13e-01 77.5% 53.1%
4190716 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.54 36.0 3.18e-01 70.4% 50.4%
5047349 220.1.1.76 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.52 39.0 3.63e-01 84.5% 83.2%
3227025 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.51 36.0 3.84e-01 76.1% 90.0%
4969052 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.51 36.0 2.45e-01 77.5% 78.1%