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LC597490.1__BCO16317.1__X__00264

Bact-Vir

LC597490.1__BCO16317.1__X__00264

Identity

Accession:
LC597490 ↗
Kingdom:
phage

Quality

68.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bacillus_phage_vB_BceM_WH1

TaxID: 2795294

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-78
PDB
Domain cluster: rep: LC597490.1__BCO16311.1__X__00258__D2-76
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1xjvA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 48.0 3.91e-01 90.9% 48.3%
3isxA02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.54 30.0 2.91e-01 77.9% 48.3%
1pkpA02 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.52 35.0 3.56e-01 70.1% 100.0%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3581490 2.1.1.72 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › POT1PC 0.68 57.0 4.43e-01 90.9% 44.4%
3218095 2.1.1.72 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › POT1PC 0.65 53.0 4.06e-01 89.6% 46.7%
3923766 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 48.0 4.23e-01 94.8% 66.1%
3320142 4007.1.1.1 ↗ a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg 0.56 42.0 4.13e-01 80.5% 98.8%
3570399 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 35.0 3.71e-01 100.0% 75.4%
4995678 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 33.0 3.67e-01 100.0% 83.6%
4013406 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 40.0 4.09e-01 100.0% 89.3%
4012945 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 40.0 4.03e-01 100.0% 88.0%
3601244 219.1.1.4 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 0.51 40.0 2.63e-01 89.6% 30.9%
4029199 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.50 35.0 2.05e-01 75.3% 9.5%