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LC597490.1__BCO16339.1__X__00286

Bact-Vir

LC597490.1__BCO16339.1__X__00286

Identity

Accession:
LC597490 ↗
Kingdom:
phage

Quality

87.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bacillus_phage_vB_BceM_WH1

TaxID: 2795294

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-66
PDB
Domain cluster: rep: gwa1_scaffold_1_prodigal-single.1__X__X__00366__D3-59
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6xmpA01 2.70.150.10 Mainly Beta › Distorted Sandwich › Calcium-transporting ATPase, cytoplasmic transduction domain A › Calcium-transporting ATPase, cytoplasmic transduction domain A 0.68 52.0 4.03e-01 79.7% 93.2%
2hc8A00 2.70.150.10 Mainly Beta › Distorted Sandwich › Calcium-transporting ATPase, cytoplasmic transduction domain A › Calcium-transporting ATPase, cytoplasmic transduction domain A 0.66 53.0 4.34e-01 85.9% 84.1%
4umwA02 2.70.150.10 Mainly Beta › Distorted Sandwich › Calcium-transporting ATPase, cytoplasmic transduction domain A › Calcium-transporting ATPase, cytoplasmic transduction domain A 0.64 55.0 4.86e-01 92.2% 100.0%
2kz4A00 2.40.10.270 Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein 0.63 54.0 4.60e-01 100.0% 89.3%
2cw8A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.62 53.0 4.01e-01 100.0% 88.2%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 40.0 3.97e-01 79.7% 63.6%
4gzuA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 44.0 3.36e-01 100.0% 36.0%
2hldH01 2.60.15.10 Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.56 48.0 4.42e-01 100.0% 75.0%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 31.0 3.38e-01 73.4% 68.8%
1hq0A00 3.60.100.10 Alpha Beta › 4-Layer Sandwich › Cytotoxic necrotizing factor 1 (CNF1) › Cytotoxic necrotizing factor, Rho-activating domain 0.54 42.0 2.88e-01 95.3% 60.3%
1bq5A01 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.52 40.0 3.15e-01 87.5% 96.7%
2e5yA01 2.60.15.10 Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.52 43.0 3.95e-01 100.0% 71.6%
2yfsA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 40.0 2.47e-01 92.2% 71.7%
5dn6I00 2.60.15.10 Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.51 42.0 4.06e-01 100.0% 84.0%
2f8mA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.50 33.0 3.15e-01 100.0% 54.4%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2921156 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.72 57.0 4.46e-01 84.4% 86.5%
3386756 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.72 57.0 4.77e-01 85.9% 89.1%
5017326 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.72 57.0 4.64e-01 85.9% 83.3%
3839979 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.72 58.0 4.80e-01 87.5% 89.1%
5001404 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.71 57.0 4.53e-01 85.9% 79.2%
4278363 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.70 55.0 4.47e-01 84.4% 82.5%
3568711 10.13.1.0 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A 0.70 53.0 4.35e-01 81.2% 82.6%
3937119 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.70 54.0 3.84e-01 81.2% 70.6%
3404035 389.1.2.0 ↗ few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.69 49.0 4.72e-01 100.0% 65.8%
3619558 10.13.1.0 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A 0.69 54.0 3.81e-01 82.8% 45.9%
3477935 10.13.1.0 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A 0.69 53.0 4.65e-01 82.8% 95.8%
4024855 10.13.1.0 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A 0.69 54.0 4.15e-01 82.8% 77.0%
5024838 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.69 55.0 4.56e-01 85.9% 89.1%
5053448 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.68 55.0 4.74e-01 87.5% 96.0%
5072740 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.68 55.0 4.53e-01 85.9% 90.0%
3257177 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.68 54.0 3.12e-01 84.4% 26.7%
3710856 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.68 55.0 4.39e-01 85.9% 79.2%
3215817 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.68 54.0 3.08e-01 84.4% 23.7%
3971963 10.13.1.0 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A 0.68 55.0 4.49e-01 87.5% 83.5%
4975608 10.13.1.0 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A 0.68 55.0 4.62e-01 87.5% 91.4%
4944497 10.13.1.0 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A 0.68 54.0 4.36e-01 85.9% 79.2%
4981497 10.13.1.0 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A 0.67 54.0 4.46e-01 87.5% 83.5%
3773064 2006.1.1.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.67 53.0 3.04e-01 84.4% 25.4%
4943938 10.13.1.0 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A 0.67 54.0 4.34e-01 85.9% 82.5%
4946766 10.13.1.0 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A 0.67 54.0 4.35e-01 85.9% 96.7%
3847390 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.67 52.0 4.30e-01 84.4% 95.7%
3744893 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.66 53.0 4.28e-01 85.9% 97.5%
3509747 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.66 53.0 3.81e-01 85.9% 82.2%
3173354 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.66 52.0 4.09e-01 85.9% 99.3%
3943275 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.65 52.0 4.28e-01 87.5% 80.0%
4963111 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.64 34.0 3.93e-01 71.9% 71.1%
4538625 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.64 55.0 4.71e-01 93.8% 91.0%
3872632 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.63 53.0 3.76e-01 92.2% 77.4%
4025953 10.13.1.0 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A 0.62 53.0 3.84e-01 92.2% 85.9%
3987877 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.62 54.0 4.60e-01 95.3% 89.0%
None — 0.62 53.0 3.03e-01 93.8% 23.4%
4940451 69.1.1.4 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.61 53.0 4.22e-01 100.0% 88.1%
3842942 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.61 53.0 3.67e-01 93.8% 74.5%
4028821 10.13.1.1 ↗ beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase 0.60 51.0 4.20e-01 93.8% 94.8%
4343999 11.1.1.12 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin 0.60 41.0 4.26e-01 73.4% 95.0%
4392318 69.1.1.4 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.59 51.0 3.76e-01 100.0% 89.2%
5024341 69.1.1.4 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing 0.58 51.0 3.65e-01 96.9% 48.6%
5073647 224.1.1.2 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin 0.57 49.0 4.13e-01 95.3% 83.8%
5076630 224.1.1.2 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin 0.56 48.0 4.12e-01 95.3% 87.0%
4245466 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.55 33.0 3.52e-01 75.0% 70.0%
3924850 4.1.1.25 ↗ beta barrels › SH3 › SH3 › SH3 › PAZ 0.55 45.0 3.61e-01 90.6% 81.6%
3217156 243.1.1.46 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF5382 0.55 39.0 3.18e-01 79.7% 60.0%
3498392 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 43.0 3.60e-01 100.0% 49.6%
3411134 5.1.4.12 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.52 42.0 2.54e-01 90.6% 23.0%