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LC603689.1__BCS79952.1__X__00001
Bact-VirLC603689.1__BCS79952.1__X__00001
Identity
- Accession:
- LC603689 ↗
- Kingdom:
- phage
Quality
73.4
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-93
Domain cluster:
rep: MT104122.1__QIG62552.1__X__00038__D20-102
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13730.13 best | HTH_36 | 47.9 | 1.30e-12 | 67.9% | 98.2% |
D2
high
residues 143-204
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kruA01 | 1.10.8.550 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B | 0.61 | 45.0 | 4.74e-01 | 87.1% | 100.0% |
| 6fhoA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 49.0 | 3.50e-01 | 91.9% | 83.3% |
| 3rx6A00 | 1.20.58.1090 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phage polarity suppression protein monomer | 0.55 | 37.0 | 2.68e-01 | 71.0% | 27.8% |
| 4bfmA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.54 | 45.0 | 2.95e-01 | 96.8% | 68.1% |
| 3cnhB02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 39.0 | 3.82e-01 | 91.9% | 73.5% |
| 5d18A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.50 | 43.0 | 3.10e-01 | 100.0% | 62.9% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4267989 | 206.1.1.199 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF441 | 0.66 | 48.0 | 4.03e-01 | 77.4% | 93.3% |
| 3259748 | 3589.1.1.1 ↗ | a+b complex topology › RNAi polymerase N-terminal domain › RNAi polymerase N-terminal domain › RNAi polymerase N-terminal domain › RdRP | 0.64 | 51.0 | 3.60e-01 | 93.5% | 28.6% |
| 3680927 | 3542.1.1.3 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Peptidase_A22B | 0.60 | 53.0 | 3.36e-01 | 98.4% | 32.4% |
| 5060737 | 179.1.1.1 ↗ | alpha bundles › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › Fer2_2 | 0.59 | 42.0 | 4.55e-01 | 96.8% | 94.0% |
| 3979831 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.58 | 47.0 | 4.70e-01 | 96.8% | 98.5% |
| 3781420 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.57 | 45.0 | 4.46e-01 | 95.2% | 97.1% |
| 4138616 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.57 | 44.0 | 4.35e-01 | 91.9% | 83.1% |