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LC628082.1__BCU41441.1__X__00017
Bact-VirLC628082.1__BCU41441.1__X__00017
Identity
- Accession:
- LC628082 ↗
- Kingdom:
- phage
Quality
88.7
mean pLDDT
Taxonomy
TaxID: 2816879
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-150
Domain cluster:
rep: KJ528544.1__AHZ10878.1__WP2_06__00006__D11-141
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jg2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 59.0 | 5.29e-01 | 100.0% | 83.8% |
| 7oc3A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 25.0 | 2.92e-01 | 94.9% | 51.1% |
| 2ex5A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.55 | 39.0 | 3.44e-01 | 73.2% | 68.6% |
| 1kafA00 | 3.90.1150.20 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain | 0.55 | 28.0 | 3.12e-01 | 92.0% | 59.3% |
| 2ab5A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.52 | 34.0 | 3.50e-01 | 98.6% | 68.7% |
| 5a72A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.50 | 36.0 | 3.53e-01 | 74.6% | 84.1% |
| 2if1A00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.50 | 31.0 | 3.24e-01 | 96.4% | 65.9% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3380367 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 61.0 | 5.41e-01 | 95.7% | 79.5% |
| 3967657 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 40.0 | 4.86e-01 | 95.7% | 96.7% |
| 4240090 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.64 | 39.0 | 4.51e-01 | 97.8% | 84.0% |
| 235847 | 2.1.1.53 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Enc34_ssDNA-bd | 0.63 | 59.0 | 5.42e-01 | 100.0% | 89.6% |
| 3488538 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 41.0 | 4.27e-01 | 95.7% | 70.0% |
| 2132736 | 2.1.1.53 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Enc34_ssDNA-bd | 0.61 | 56.0 | 5.11e-01 | 100.0% | 83.8% |
| 4991837 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.57 | 34.0 | 4.04e-01 | 95.7% | 86.3% |
| 4961473 | 304.165.1.2 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › BAT | 0.57 | 40.0 | 3.99e-01 | 100.0% | 69.0% |
| 4961281 | 304.165.1.2 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › BAT | 0.55 | 38.0 | 3.74e-01 | 98.6% | 64.7% |
| 4971000 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.55 | 33.0 | 3.83e-01 | 100.0% | 83.0% |
| 4961458 | 304.165.1.0 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 | 0.52 | 40.0 | 3.90e-01 | 99.3% | 73.3% |