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LC644971.1__BCZ75762.1__X__00007
Bact-VirLC644971.1__BCZ75762.1__X__00007
Identity
- Accession:
- LC644971 ↗
- Kingdom:
- phage
Quality
81.1
mean pLDDT
Cluster
View cluster (16 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-73
Domain cluster:
rep: SR-VP_4-6_scaffold_141_476970_prodigal-single.1__X__X__00020__D15-72
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ffjA04 | 2.60.40.4040 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 43.0 | 3.39e-01 | 100.0% | 30.7% |
| 2bkfA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.64 | 42.0 | 3.84e-01 | 100.0% | 48.2% |
| 1wmhA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.64 | 42.0 | 3.86e-01 | 100.0% | 49.4% |
| 3bn6A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 51.0 | 3.79e-01 | 100.0% | 35.4% |
| 1zbuB01 | 1.10.720.30 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › SAP domain | 0.61 | 38.0 | 3.55e-01 | 89.8% | 50.0% |
| 1etb200 | 2.60.40.180 | Mainly Beta › Sandwich › Immunoglobulin-like › Transthyretin/hydroxyisourate hydrolase domain | 0.59 | 44.0 | 3.56e-01 | 100.0% | 41.0% |
| 4p78A00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 49.0 | 4.43e-01 | 100.0% | 95.3% |
| 7ui8A01 | 2.60.40.3930 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 48.0 | 4.01e-01 | 100.0% | 52.9% |
| 3omzA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 52.0 | 4.31e-01 | 100.0% | 61.8% |
| 2pstX00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.57 | 45.0 | 4.54e-01 | 88.1% | 83.6% |
| 2h5eA03 | 3.30.70.3280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptide chain release factor 3, domain III | 0.57 | 47.0 | 3.76e-01 | 100.0% | 49.6% |
| 3lgdA00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.57 | 46.0 | 2.75e-01 | 93.2% | 44.6% |
| 3n0vA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 47.0 | 4.26e-01 | 100.0% | 97.6% |
| 2dt9A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 46.0 | 4.27e-01 | 96.6% | 98.7% |
| 5jtwA03 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 48.0 | 3.79e-01 | 100.0% | 50.4% |
| 1wmdA02 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 42.0 | 3.54e-01 | 100.0% | 46.2% |
| 4jzjC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 44.0 | 3.67e-01 | 100.0% | 51.0% |
| 5xctB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 46.0 | 3.83e-01 | 100.0% | 54.5% |
| 7sz2A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.54 | 46.0 | 4.05e-01 | 100.0% | 87.0% |
| 6ztgA01 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.53 | 42.0 | 4.04e-01 | 98.3% | 100.0% |
| 1o6zA01 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.52 | 39.0 | 3.00e-01 | 86.4% | 86.3% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.52 | 43.0 | 3.15e-01 | 100.0% | 38.8% |
| 6kxkG01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.52 | 44.0 | 3.48e-01 | 100.0% | 95.5% |
| 2fr5A00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.50 | 41.0 | 3.31e-01 | 100.0% | 72.8% |
| 1r5tA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.50 | 41.0 | 3.29e-01 | 100.0% | 72.3% |
| 4b7lA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 37.0 | 3.22e-01 | 100.0% | 48.0% |
| 1zxuA00 | 2.40.160.200 | Mainly Beta › Beta Barrel › Porin › LURP1-related | 0.50 | 38.0 | 2.85e-01 | 84.7% | 90.7% |
| 2orzA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 42.0 | 3.20e-01 | 100.0% | 58.4% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3838043 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.74 | 67.0 | 5.56e-01 | 100.0% | 93.0% |
| 3688438 | 6.1.1.37 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › DUF7908 | 0.71 | 63.0 | 4.81e-01 | 100.0% | 94.8% |
| 4964337 | 3115.5.1.1 ↗ | a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB | 0.67 | 50.0 | 5.17e-01 | 100.0% | 89.1% |
| 5054338 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.66 | 45.0 | 2.74e-01 | 71.2% | 22.2% |
| 3609766 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 55.0 | 3.51e-01 | 100.0% | 30.3% |
| 3677650 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 45.0 | 2.86e-01 | 81.4% | 40.9% |
| 3210991 | 11.1.1.462 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › REJ | 0.60 | 48.0 | 4.02e-01 | 100.0% | 50.5% |
| 3552986 | 11.1.1.275 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL3Ra_N | 0.59 | 42.0 | 3.70e-01 | 100.0% | 51.8% |
| 3727776 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 40.0 | 3.70e-01 | 98.3% | 56.0% |
| 3666791 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 43.0 | 4.51e-01 | 100.0% | 100.0% |
| 5038834 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.57 | 47.0 | 3.68e-01 | 100.0% | 41.3% |
| 4026734 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.56 | 39.0 | 2.63e-01 | 74.6% | 22.7% |
| 3874262 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.56 | 49.0 | 4.03e-01 | 100.0% | 79.1% |
| 139586 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 47.0 | 4.27e-01 | 100.0% | 98.8% |
| 3486746 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 48.0 | 3.64e-01 | 100.0% | 47.6% |
| 3854772 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.55 | 47.0 | 4.18e-01 | 100.0% | 88.9% |
| 3519899 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.55 | 45.0 | 3.43e-01 | 100.0% | 38.6% |
| 3268480 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 43.0 | 3.36e-01 | 100.0% | 35.6% |
| 4587861 | 3610.1.1.2 ↗ | a+b complex topology › Tetrahydrodipicolinate N-succinyletransferase N-terminal domain › Tetrahydrodipicolinate N-succinyletransferase N-terminal domain › Tetrahydrodipicolinate N-succinyletransferase N-terminal domain › THDPS_M,THDPS_N | 0.55 | 46.0 | 3.58e-01 | 100.0% | 42.1% |
| 2756600 | 2.1.1.13 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a | 0.54 | 37.0 | 3.51e-01 | 76.3% | 58.9% |
| 4976988 | 304.8.1.9 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 | 0.53 | 44.0 | 3.96e-01 | 100.0% | 88.9% |
| 3431400 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 45.0 | 3.45e-01 | 100.0% | 44.7% |
| 4159686 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.53 | 43.0 | 3.32e-01 | 98.3% | 86.5% |
| 3800040 | 5.1.4.422 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_Rol-3 | 0.52 | 44.0 | 3.07e-01 | 100.0% | 94.7% |
| 3605278 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 43.0 | 3.27e-01 | 96.6% | 41.9% |
| 3538049 | 11.1.1.636 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL17_R_N | 0.51 | 45.0 | 3.23e-01 | 100.0% | 40.0% |
| 3299054 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 38.0 | 2.44e-01 | 86.4% | 88.9% |
| 3400500 | 223.2.1.25 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Avl9 | 0.51 | 39.0 | 2.90e-01 | 84.7% | 87.9% |
| 3916184 | 221.1.1.168 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd, PI3K_p85B | 0.51 | 35.0 | 2.24e-01 | 71.2% | 20.0% |
| 3497883 | 10.32.1.94 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CDC50 | 0.51 | 43.0 | 3.26e-01 | 100.0% | 66.9% |