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LC644972.1__BCZ75821.1__X__00026

Bact-Vir

LC644972.1__BCZ75821.1__X__00026

Identity

Accession:
LC644972 ↗
Kingdom:
phage

Quality

68.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Acetobacter_phage_phiAP1

TaxID: 2860312

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-73
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.73 51.0 4.16e-01 74.6% 54.1%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 52.0 4.90e-01 76.3% 67.6%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 49.0 4.72e-01 72.9% 88.6%
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 52.0 4.99e-01 78.0% 92.6%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 50.0 4.76e-01 74.6% 66.7%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 51.0 5.37e-01 76.3% 94.1%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 50.0 4.52e-01 76.3% 67.5%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 50.0 5.12e-01 76.3% 98.2%
5hk0B00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.70 60.0 5.02e-01 100.0% 89.7%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.70 51.0 5.05e-01 78.0% 95.2%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 50.0 4.83e-01 76.3% 74.2%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 50.0 5.36e-01 76.3% 95.8%
3lx7A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 49.0 5.32e-01 76.3% 95.7%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.69 49.0 5.13e-01 76.3% 90.7%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.69 47.0 5.12e-01 72.9% 93.8%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.68 48.0 5.05e-01 74.6% 90.4%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.68 48.0 4.01e-01 74.6% 43.1%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.67 49.0 4.19e-01 79.7% 53.1%
3jscA00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.67 56.0 4.91e-01 100.0% 90.6%
1m9sA03 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.66 45.0 4.25e-01 72.9% 89.3%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 47.0 4.56e-01 76.3% 73.5%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 48.0 4.58e-01 78.0% 85.7%
3ic8A01 3.40.30.110 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.66 46.0 3.35e-01 74.6% 29.4%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 45.0 4.89e-01 72.9% 91.8%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 48.0 4.67e-01 86.4% 71.2%
7k9cA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 56.0 5.01e-01 100.0% 74.4%
3hfnA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 46.0 4.66e-01 76.3% 75.0%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 46.0 4.52e-01 76.3% 71.2%
1m9sA04 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.65 47.0 4.21e-01 78.0% 86.0%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.65 46.0 4.94e-01 78.0% 90.0%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.65 47.0 4.59e-01 78.0% 83.3%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.63 53.0 4.90e-01 94.9% 90.9%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 49.0 4.77e-01 86.4% 87.9%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 49.0 4.80e-01 88.1% 93.9%
3pvlA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 48.0 4.46e-01 84.7% 85.5%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 42.0 4.47e-01 72.9% 93.6%
3by7E00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 50.0 4.67e-01 96.6% 97.4%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.59 46.0 4.58e-01 84.7% 93.3%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 42.0 4.15e-01 78.0% 88.7%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 44.0 4.16e-01 84.7% 69.9%
1khcA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 40.0 3.91e-01 74.6% 83.1%
4c92A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 42.0 3.42e-01 86.4% 50.8%
3ceyB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 43.0 3.40e-01 94.9% 58.2%
1hlqA00 4.10.490.10 Few Secondary Structures › Irregular › High-Potential Iron-Sulfur Protein; Chain A › High potential iron-sulphur protein 0.52 36.0 3.39e-01 74.6% 77.3%
ECOD (97)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4949848 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.76 57.0 5.91e-01 79.7% 87.3%
3833030 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.72 51.0 3.83e-01 74.6% 34.8%
3964733 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 52.0 5.36e-01 78.0% 85.5%
3604145 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 50.0 5.01e-01 74.6% 78.3%
3708055 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.71 49.0 4.81e-01 72.9% 72.3%
4932493 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 55.0 5.35e-01 84.7% 83.1%
5002601 4.1.1.485 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6897 0.70 49.0 4.97e-01 74.6% 79.7%
3620094 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 50.0 5.19e-01 76.3% 87.3%
3601162 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 48.0 4.72e-01 72.9% 72.3%
3622846 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.70 50.0 5.31e-01 76.3% 96.0%
4321173 4.1.1.98 ↗ beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.70 49.0 4.97e-01 74.6% 77.6%
3586487 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 48.0 4.27e-01 72.9% 54.1%
3550644 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 50.0 5.12e-01 76.3% 89.1%
4000280 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 50.0 5.18e-01 78.0% 89.1%
4646501 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 49.0 3.65e-01 76.3% 31.6%
3299797 4.1.1.306 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.69 48.0 4.87e-01 74.6% 76.7%
3546607 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.69 48.0 5.07e-01 72.9% 90.0%
3404936 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.69 48.0 5.09e-01 72.9% 90.0%
4332042 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 50.0 4.81e-01 79.7% 71.4%
3420348 4.1.1.306 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.69 48.0 4.96e-01 74.6% 83.6%
5025104 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 50.0 5.29e-01 78.0% 98.0%
3795121 4.1.1.110 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 0.68 49.0 4.75e-01 76.3% 73.8%
4559371 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 49.0 4.89e-01 78.0% 85.7%
3642001 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.68 49.0 4.63e-01 76.3% 88.6%
5018157 4.1.1.485 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6897 0.68 47.0 4.75e-01 72.9% 80.0%
135648 4.1.1.142 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq_1 0.68 48.0 4.74e-01 76.3% 73.8%
4953054 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 49.0 4.58e-01 78.0% 61.3%
4540843 4.1.1.434 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2642 0.68 48.0 4.74e-01 76.3% 73.8%
4418620 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 49.0 2.65e-01 76.3% 4.6%
4400642 4.1.1.257 ↗ beta barrels › SH3 › SH3 › SH3 › Flag1_repress 0.68 48.0 4.28e-01 74.6% 56.5%
4451993 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.68 49.0 4.88e-01 76.3% 80.0%
4147366 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.68 48.0 5.13e-01 76.3% 97.9%
3326980 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.68 49.0 4.94e-01 78.0% 80.0%
3938589 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.67 46.0 4.95e-01 72.9% 90.0%
4432348 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 49.0 4.71e-01 78.0% 72.1%
3903213 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 48.0 3.45e-01 76.3% 26.9%
4975764 4.1.1.485 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6897 0.67 48.0 4.62e-01 78.0% 68.6%
1145920 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.67 48.0 4.31e-01 76.3% 56.6%
4084190 4.1.1.98 ↗ beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.67 45.0 4.60e-01 71.2% 72.9%
4973749 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 48.0 4.63e-01 78.0% 65.7%
4658938 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.67 49.0 4.27e-01 78.0% 53.3%
3428486 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.67 48.0 4.35e-01 76.3% 58.7%
4058174 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 49.0 4.76e-01 78.0% 78.5%
3174977 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.67 59.0 5.04e-01 100.0% 90.5%
5001903 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 48.0 4.60e-01 78.0% 65.7%
3709029 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 47.0 4.77e-01 76.3% 83.3%
3928711 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 52.0 4.61e-01 84.7% 90.6%
4985969 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 48.0 4.81e-01 78.0% 76.7%
5025364 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.67 48.0 4.47e-01 78.0% 70.7%
4662294 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 47.0 4.80e-01 74.6% 83.6%
3775592 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 47.0 2.52e-01 76.3% 3.0%
3710823 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 48.0 5.08e-01 76.3% 92.0%
3839016 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 48.0 4.68e-01 78.0% 76.9%
4287411 4.1.1.182 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2097 0.66 49.0 4.46e-01 79.7% 67.5%
4123180 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.66 48.0 4.51e-01 86.4% 62.7%
3398496 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.66 47.0 4.88e-01 76.3% 89.1%
3578208 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 46.0 4.76e-01 72.9% 89.1%
3290899 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.66 49.0 4.69e-01 86.4% 68.6%
3598284 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 47.0 4.85e-01 78.0% 81.8%
3218198 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 45.0 4.63e-01 71.2% 81.8%
4936291 4.1.1.487 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7205 0.66 48.0 4.67e-01 78.0% 75.4%
3574613 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.66 47.0 3.98e-01 76.3% 47.0%
1263519 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.66 47.0 4.66e-01 76.3% 75.8%
5047239 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 46.0 4.58e-01 76.3% 79.7%
3858886 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.66 46.0 4.62e-01 74.6% 80.0%
3795384 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 53.0 3.62e-01 89.8% 39.5%
3616243 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 46.0 4.74e-01 74.6% 85.5%
3649741 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.65 47.0 4.35e-01 76.3% 62.7%
4076879 4.1.1.87 ↗ beta barrels › SH3 › SH3 › SH3 › FLgD_tudor 0.65 44.0 4.71e-01 74.6% 84.0%
4359892 4.1.1.96 ↗ beta barrels › SH3 › SH3 › SH3 › Hfq 0.65 48.0 4.43e-01 81.4% 70.0%
3998022 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.65 46.0 4.78e-01 76.3% 85.5%
4844109 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.65 44.0 4.19e-01 71.2% 62.0%
4862202 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.65 46.0 4.92e-01 74.6% 93.9%
4031509 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 46.0 4.61e-01 76.3% 75.0%
4149821 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 45.0 4.54e-01 74.6% 78.3%
5074749 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 48.0 4.58e-01 81.4% 71.4%
5004476 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 48.0 4.73e-01 84.7% 75.4%
5080336 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 49.0 4.82e-01 84.7% 78.1%
None — 0.64 46.0 2.46e-01 76.3% 3.7%
3817476 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.64 45.0 4.75e-01 74.6% 92.0%
4011604 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.64 46.0 4.36e-01 79.7% 72.0%
3852545 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 45.0 4.54e-01 76.3% 83.3%
5005252 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 44.0 4.85e-01 76.3% 100.0%
4068333 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 45.0 4.42e-01 78.0% 75.4%
4044896 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 52.0 4.91e-01 98.3% 80.0%
4679625 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 44.0 4.43e-01 76.3% 85.0%
4147290 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.62 44.0 4.36e-01 89.8% 72.3%
5013683 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 44.0 4.42e-01 83.1% 78.3%
4514731 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 52.0 4.72e-01 100.0% 70.6%
3899828 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.60 50.0 4.63e-01 100.0% 87.5%
3492757 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 42.0 4.04e-01 76.3% 74.3%
3785385 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 50.0 4.46e-01 100.0% 66.7%
3577864 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.59 42.0 3.81e-01 76.3% 56.5%
3969500 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 48.0 4.19e-01 93.2% 97.9%
4938445 4.11.1.2 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.59 46.0 3.67e-01 91.5% 40.7%
5017637 4.1.1.458 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2098 0.57 38.0 3.95e-01 72.9% 78.2%
5000767 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.50 37.0 3.86e-01 81.4% 96.0%
D2 high residues 110-234
PDB
Domain cluster: rep: KR072689.1__AKG94567.1__Shpa_57__00056__D74-188