←Back to structures

LC644972.1__BCZ75822.1__X__00027

Bact-Vir

LC644972.1__BCZ75822.1__X__00027

Identity

Accession:
LC644972 ↗
Kingdom:
phage

Quality

79.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Acetobacter_phage_phiAP1

TaxID: 2860312

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-103
PDB
Domain cluster: rep: OK896991.1__UDY80742.1__X__00073__D5-103
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ne8A00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.83 76.0 7.04e-01 98.9% 92.2%
5hk0B00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.81 75.0 7.11e-01 98.9% 94.4%
4rmoA00 3.10.129.130 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.81 74.0 6.22e-01 100.0% 86.4%
5uctB00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.77 71.0 6.93e-01 98.9% 96.0%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 40.0 4.96e-01 72.0% 81.4%
4glkA00 3.10.129.130 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.75 68.0 5.58e-01 100.0% 81.2%
2xdbA00 3.10.129.130 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.73 66.0 5.46e-01 100.0% 88.3%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 40.0 4.18e-01 77.4% 70.2%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.62 45.0 4.92e-01 86.0% 90.9%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.61 40.0 3.80e-01 76.3% 56.9%
2ew0A00 3.40.1740.10 Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like 0.55 43.0 3.51e-01 83.9% 83.4%
3kewB02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.52 32.0 2.79e-01 80.6% 39.6%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3722930 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 78.0 6.06e-01 97.8% 78.9%
3589640 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.85 78.0 7.30e-01 96.8% 92.7%
5045554 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.84 79.0 7.14e-01 98.9% 90.8%
4667326 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.83 77.0 7.07e-01 98.9% 93.0%
1109151 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.83 77.0 6.95e-01 98.9% 91.7%
4645229 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.82 76.0 7.19e-01 98.9% 94.5%
3955085 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.82 74.0 7.24e-01 96.8% 96.0%
2643543 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.82 76.0 6.83e-01 98.9% 91.0%
3951374 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.82 74.0 7.11e-01 96.8% 92.4%
1952922 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.81 74.0 7.02e-01 98.9% 94.5%
2507392 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.80 74.0 6.92e-01 98.9% 88.4%
3955877 4.1.1.432 ↗ beta barrels › SH3 › SH3 › SH3 › PF27466 0.80 74.0 7.18e-01 97.8% 95.0%
4016602 4.1.1.179 ↗ beta barrels › SH3 › SH3 › SH3 › DUF6590 0.80 72.0 6.14e-01 96.8% 90.9%
4034169 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.80 74.0 6.30e-01 100.0% 75.7%
3482559 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 47.0 3.71e-01 76.3% 32.9%
2046239 4.1.1.30 ↗ beta barrels › SH3 › SH3 › SH3 › PemK_toxin 0.77 71.0 6.93e-01 98.9% 96.0%
3502443 4.1.1.23 ↗ beta barrels › SH3 › SH3 › SH3 › CcdB 0.77 70.0 6.82e-01 97.8% 95.0%
3290347 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 70.0 6.92e-01 98.9% 95.9%
2793139 4.1.1.88 ↗ beta barrels › SH3 › SH3 › SH3 › ToxN_toxin 0.73 66.0 5.46e-01 100.0% 87.7%
3473407 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 48.0 5.33e-01 75.3% 84.0%
4655719 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.63 42.0 4.28e-01 72.0% 70.0%
552 4.1.1.61 ↗ beta barrels › SH3 › SH3 › SH3 › KapB 0.61 40.0 3.80e-01 76.3% 56.9%
3489469 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 44.0 4.22e-01 75.3% 81.0%
3808601 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 45.0 4.69e-01 76.3% 91.8%
3801650 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 42.0 4.26e-01 73.1% 73.3%
3295687 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.59 50.0 4.76e-01 88.2% 83.8%
3514522 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.58 42.0 4.63e-01 76.3% 92.0%
3859218 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.56 40.0 3.70e-01 74.2% 79.2%
3982999 4.1.1.60 ↗ beta barrels › SH3 › SH3 › SH3 › YccV-like 0.56 46.0 4.48e-01 86.0% 88.0%
3738927 4.1.1.85 ↗ beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel 0.55 49.0 4.37e-01 95.7% 80.0%
3934655 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 38.0 4.00e-01 72.0% 98.8%
3708283 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 39.0 4.06e-01 77.4% 88.2%
3912956 4.1.1.56 ↗ beta barrels › SH3 › SH3 › SH3 › RBB1NT 0.52 43.0 3.88e-01 86.0% 90.8%