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LC644973.1__BCZ75865.1__X__00005
Bact-VirLC644973.1__BCZ75865.1__X__00005
Identity
- Accession:
- LC644973 ↗
- Kingdom:
- phage
Quality
72.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-65
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 46.0 | 3.95e-01 | 89.5% | 50.5% |
| 2cxiA03 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.58 | 49.0 | 4.64e-01 | 100.0% | 90.0% |
| 5hvqC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 44.0 | 3.76e-01 | 84.2% | 51.0% |
| 3lmmC04 | 1.10.10.2340 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.54 | 41.0 | 3.68e-01 | 87.7% | 60.9% |
| 3hhgE01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 44.0 | 3.87e-01 | 94.7% | 64.8% |
| 3szpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 43.0 | 3.80e-01 | 94.7% | 64.0% |
| 5hmpB02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 41.0 | 4.08e-01 | 100.0% | 89.1% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3952885 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.75 | 60.0 | 6.26e-01 | 100.0% | 100.0% |
| 5062870 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 47.0 | 4.17e-01 | 82.5% | 63.3% |
| 3946899 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.62 | 42.0 | 3.60e-01 | 70.2% | 65.3% |
| 5049306 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 48.0 | 3.92e-01 | 94.7% | 50.4% |
| 4978956 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.56 | 50.0 | 4.09e-01 | 100.0% | 64.8% |
| 384364 | 101.1.2.176 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF5635 | 0.56 | 41.0 | 3.58e-01 | 84.2% | 50.0% |
| 3284225 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.55 | 44.0 | 4.03e-01 | 93.0% | 76.2% |
| 3974491 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 38.0 | 3.73e-01 | 75.4% | 73.8% |
| 3986748 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.54 | 43.0 | 3.80e-01 | 91.2% | 66.7% |
| 3945660 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.54 | 43.0 | 3.84e-01 | 91.2% | 70.6% |
| 3970719 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 45.0 | 4.10e-01 | 96.5% | 71.2% |
| 3741150 | 101.1.2.281 ↗ | alpha arrays › HTH › HTH › winged helix domain › Tfb2 | 0.54 | 38.0 | 3.49e-01 | 94.7% | 55.0% |
| 4135755 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.53 | 44.0 | 3.84e-01 | 94.7% | 64.4% |
| 4570068 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.53 | 45.0 | 3.95e-01 | 100.0% | 66.7% |
| 3315621 | 170.2.1.0 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein N-terminal domain › Retrovirus capsid protein N-terminal domain | 0.53 | 33.0 | 2.90e-01 | 100.0% | 36.8% |
| 3942028 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.53 | 42.0 | 3.69e-01 | 91.2% | 65.6% |
| 3969385 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 45.0 | 4.07e-01 | 100.0% | 75.0% |
| 5023893 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.52 | 41.0 | 2.84e-01 | 96.5% | 22.6% |
| 3966995 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.52 | 42.0 | 3.75e-01 | 94.7% | 63.3% |
| 3943559 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.52 | 42.0 | 3.76e-01 | 94.7% | 63.3% |
| 5046554 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 42.0 | 3.79e-01 | 91.2% | 77.5% |
| 3284253 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.52 | 43.0 | 3.74e-01 | 94.7% | 68.9% |
| 3971943 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 41.0 | 3.78e-01 | 94.7% | 71.2% |