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LC644973.1__BCZ75918.1__X__00058

Bact-Vir

LC644973.1__BCZ75918.1__X__00058

Identity

Accession:
LC644973 ↗
Kingdom:
phage

Quality

82.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Acetobacter_phage_phiAX1

TaxID: 2860314

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-95
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 45.0 5.33e-01 82.9% 100.0%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 41.0 4.99e-01 76.8% 100.0%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 44.0 4.78e-01 80.5% 80.9%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 44.0 4.77e-01 80.5% 83.3%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 43.0 4.64e-01 82.9% 78.3%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 40.0 4.82e-01 80.5% 96.2%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 44.0 4.94e-01 82.9% 95.2%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 40.0 4.59e-01 75.6% 89.8%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 41.0 4.60e-01 78.0% 87.3%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 42.0 4.61e-01 76.8% 86.2%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 43.0 4.87e-01 81.7% 95.2%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 40.0 4.51e-01 79.3% 85.7%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 43.0 4.73e-01 92.7% 93.8%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 47.0 4.99e-01 96.3% 93.2%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 38.0 4.10e-01 78.0% 73.2%
2e6nA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 48.0 4.47e-01 95.1% 68.3%
2d7eA01 3.40.1440.60 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › PriA, 3(prime) DNA-binding domain 0.60 36.0 3.50e-01 84.1% 53.3%
2fjrA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.59 54.0 4.82e-01 100.0% 86.7%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.58 43.0 3.93e-01 79.3% 58.7%
2gfuA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 44.0 3.80e-01 84.1% 50.0%
1khcA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 40.0 4.38e-01 82.9% 92.3%
4k8wA00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.57 48.0 4.22e-01 90.2% 91.5%
3pfsB00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 45.0 3.88e-01 85.4% 69.2%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 41.0 3.92e-01 82.9% 64.6%
4a4kA02 2.30.30.1160 Mainly Beta › Roll › SH3 type barrels. › 0.57 43.0 3.71e-01 81.7% 94.7%
1f39A00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.56 50.0 4.70e-01 100.0% 86.1%
2l89A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 42.0 3.85e-01 82.9% 62.0%
3ceyB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 39.0 3.27e-01 81.7% 43.3%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 33.0 3.85e-01 76.8% 100.0%
3hfnA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 36.0 3.98e-01 81.7% 93.3%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.54 36.0 3.96e-01 78.0% 90.3%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 38.0 3.86e-01 82.9% 77.1%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 40.0 3.98e-01 100.0% 80.2%
2asfA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 38.0 3.39e-01 78.0% 92.8%
1hpgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 44.0 4.17e-01 96.3% 100.0%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.52 36.0 3.83e-01 84.1% 90.9%
2fb7A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.51 36.0 3.71e-01 75.6% 90.0%
4m7dA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.51 37.0 4.08e-01 79.3% 98.5%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.51 35.0 3.78e-01 84.1% 90.9%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.51 37.0 3.80e-01 81.7% 84.4%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4000280 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 43.0 5.10e-01 81.7% 96.4%
3231263 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.67 41.0 4.93e-01 75.6% 100.0%
3586487 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 43.0 4.34e-01 84.1% 64.7%
3850775 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.66 43.0 4.76e-01 81.7% 84.6%
140210 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 43.0 4.64e-01 82.9% 78.3%
3852545 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 46.0 5.26e-01 100.0% 100.0%
3709029 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 43.0 4.92e-01 81.7% 91.7%
3395150 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 46.0 5.19e-01 81.7% 100.0%
3920026 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.65 47.0 3.49e-01 84.1% 30.0%
3488114 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 45.0 3.98e-01 82.9% 50.0%
3228278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 44.0 4.81e-01 100.0% 89.2%
4268386 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 46.0 4.97e-01 84.1% 90.0%
4026282 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.64 51.0 4.98e-01 96.3% 78.9%
3768116 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.62 48.0 3.49e-01 84.1% 31.2%
5066224 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.62 55.0 5.41e-01 100.0% 95.6%
3789132 4.1.1.146 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_uL24m-like 0.62 46.0 3.40e-01 80.5% 32.9%
3495447 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.62 45.0 3.96e-01 81.7% 52.5%
3491615 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.62 45.0 3.17e-01 81.7% 25.2%
3517377 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.62 49.0 4.89e-01 96.3% 82.4%
4929875 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.62 55.0 5.13e-01 100.0% 81.0%
4358801 4.1.1.178 ↗ beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 0.61 46.0 4.19e-01 80.5% 69.1%
3558188 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.61 43.0 4.48e-01 81.7% 80.0%
3558926 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.61 49.0 4.79e-01 96.3% 80.0%
4452122 4.1.1.7 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.60 45.0 3.96e-01 80.5% 59.3%
5037939 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.60 53.0 4.31e-01 100.0% 60.0%
4491893 4.1.1.7 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.60 44.0 4.16e-01 80.5% 69.9%
5065747 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.59 53.0 5.18e-01 100.0% 91.1%
3879653 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.59 42.0 4.47e-01 80.5% 87.1%
3888395 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.58 46.0 4.61e-01 86.6% 98.8%
4952498 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.58 52.0 4.92e-01 100.0% 94.9%
3507639 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.58 43.0 4.56e-01 84.1% 92.9%
3409896 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.58 43.0 4.00e-01 84.1% 61.0%
3625817 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.58 43.0 4.42e-01 87.8% 82.5%
4999430 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.58 50.0 4.51e-01 100.0% 70.0%
3533770 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.58 42.0 3.91e-01 82.9% 61.0%
4259069 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 51.0 3.85e-01 100.0% 42.5%
3570399 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 40.0 4.37e-01 82.9% 93.8%
4470603 4.1.1.217 ↗ beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 0.56 49.0 3.98e-01 100.0% 87.9%
3733191 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 49.0 3.21e-01 100.0% 44.5%
3594795 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 42.0 3.89e-01 80.5% 62.9%
4058174 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.56 40.0 4.42e-01 84.1% 96.9%
3627576 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 40.0 4.43e-01 76.8% 100.0%
3825252 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 42.0 4.15e-01 84.1% 83.3%
3584555 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.55 41.0 4.38e-01 79.3% 97.1%
3397845 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 46.0 4.28e-01 98.8% 72.4%
3819397 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.55 40.0 4.09e-01 81.7% 80.0%
3276044 4.1.1.315 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 0.54 47.0 3.12e-01 100.0% 57.0%
3785900 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 46.0 3.01e-01 100.0% 53.7%
3647393 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.54 42.0 3.72e-01 85.4% 59.2%
3847592 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 40.0 2.47e-01 78.0% 20.2%
3996278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 41.0 3.63e-01 81.7% 62.5%
3477686 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 37.0 3.88e-01 72.0% 98.7%
3931905 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 42.0 3.82e-01 86.6% 90.4%
4121981 4.1.1.325 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.53 42.0 3.69e-01 86.6% 82.4%
3786412 4.1.1.344 ↗ beta barrels › SH3 › SH3 › SH3 › PF31193 0.53 39.0 3.93e-01 78.0% 82.5%
3389662 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.52 40.0 4.04e-01 80.5% 83.7%
3684460 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.52 39.0 3.75e-01 81.7% 93.7%
3970579 219.1.1.18 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.51 42.0 3.58e-01 96.3% 60.0%
3972307 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.51 31.0 3.54e-01 80.5% 85.0%