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LC644975.1__BCZ76078.1__X__00073
Bact-VirLC644975.1__BCZ76078.1__X__00073
Identity
- Accession:
- LC644975 ↗
- Kingdom:
- phage
Quality
71.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-52
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bopB00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.70 | 53.0 | 3.78e-01 | 83.7% | 45.3% |
| 3tmpA01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.69 | 52.0 | 3.74e-01 | 83.7% | 45.3% |
| 3pfyA02 | 6.10.20.180 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › | 0.64 | 49.0 | 4.71e-01 | 83.7% | 89.5% |
| 1zcjA04 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.61 | 46.0 | 3.78e-01 | 89.8% | 84.1% |
| 8d8lM01 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 49.0 | 4.31e-01 | 98.0% | 66.7% |
| 1wxqA02 | 1.10.8.470 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.56 | 43.0 | 3.81e-01 | 100.0% | 78.9% |
| 3mhzA03 | 3.10.20.110 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 45.0 | 3.58e-01 | 100.0% | 84.0% |
| 2mr9A00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.52 | 33.0 | 3.40e-01 | 83.7% | 68.2% |
| 1vegA01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.52 | 33.0 | 3.40e-01 | 83.7% | 68.2% |
| 3hwrA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.51 | 38.0 | 2.98e-01 | 87.8% | 82.9% |
| 1xs9D00 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.50 | 41.0 | 3.55e-01 | 93.9% | 88.9% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004560 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.88 | 76.0 | 7.31e-01 | 100.0% | 83.6% |
| 3955076 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.87 | 72.0 | 7.46e-01 | 95.9% | 97.8% |
| 4177991 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.85 | 71.0 | 6.87e-01 | 100.0% | 81.8% |
| 3585157 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.83 | 56.0 | 5.07e-01 | 71.4% | 52.3% |
| 3587382 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 70.0 | 6.77e-01 | 100.0% | 83.6% |
| 2809236 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.81 | 73.0 | 6.69e-01 | 100.0% | 77.4% |
| 3979943 | 101.15.1.3 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_tail_X | 0.81 | 69.0 | 6.86e-01 | 98.0% | 92.0% |
| 2124918 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.79 | 67.0 | 4.79e-01 | 100.0% | 33.8% |
| 3166029 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.78 | 63.0 | 6.17e-01 | 100.0% | 83.6% |
| 4995817 | 101.15.1.4 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 | 0.78 | 69.0 | 6.13e-01 | 100.0% | 70.0% |
| 2895417 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.73 | 62.0 | 5.42e-01 | 100.0% | 63.6% |
| 4022446 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.70 | 60.0 | 5.83e-01 | 100.0% | 87.3% |
| 5039245 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 44.0 | 4.44e-01 | 81.6% | 82.0% |
| 3315181 | 4095.1.1.1 ↗ | alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N | 0.61 | 42.0 | 2.73e-01 | 75.5% | 37.7% |
| 4666406 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.60 | 47.0 | 4.40e-01 | 93.9% | 70.8% |
| 4251581 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.60 | 45.0 | 4.27e-01 | 91.8% | 72.3% |
| 4886263 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.59 | 45.0 | 4.45e-01 | 91.8% | 85.5% |
| 4283531 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.59 | 47.0 | 4.41e-01 | 100.0% | 80.0% |
| 4100484 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.59 | 45.0 | 4.43e-01 | 91.8% | 89.1% |
| 4329911 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.58 | 45.0 | 4.36e-01 | 98.0% | 76.7% |
| 4521579 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.57 | 43.0 | 3.05e-01 | 91.8% | 26.8% |
| 3573813 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.53 | 34.0 | 3.50e-01 | 83.7% | 75.0% |