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LC644975.1__BCZ76079.1__X__00074

Bact-Vir

LC644975.1__BCZ76079.1__X__00074

Identity

Accession:
LC644975 ↗
Kingdom:
phage

Quality

85.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-124
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wruA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.80 61.0 5.09e-01 100.0% 48.6%
4p02A03 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.70 53.0 5.06e-01 100.0% 68.9%
3kyfA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.67 49.0 4.78e-01 100.0% 69.2%
2q9kA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 48.0 4.34e-01 100.0% 59.9%
3fgeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 54.0 4.58e-01 100.0% 72.7%
4ci2B02 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.59 43.0 4.16e-01 93.4% 66.4%
2qtlA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.57 36.0 3.66e-01 90.6% 62.6%
6m9yA00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.57 29.0 3.68e-01 98.1% 87.7%
4dqlB01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 36.0 3.58e-01 91.5% 61.5%
3hn3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 37.0 3.81e-01 87.7% 70.2%
1ddgA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 35.0 3.48e-01 94.3% 60.5%
4ak1A02 2.30.30.1270 Mainly Beta › Roll › SH3 type barrels. › 0.54 28.0 3.46e-01 95.3% 81.2%
5gxuB01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 34.0 3.34e-01 94.3% 57.4%
4kh9B02 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.52 35.0 3.50e-01 100.0% 64.6%
1e62A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 40.0 3.78e-01 94.3% 68.0%
2ok7A01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.51 36.0 3.56e-01 94.3% 68.8%
2bhvB01 2.40.128.260 Mainly Beta › Beta Barrel › Lipocalin › Type IV secretion system, VirB10/TraB/TrbI 0.50 37.0 3.31e-01 79.2% 83.2%
4fumA01 2.20.230.10 Mainly Beta › Single Sheet › Resuscitation-promoting factor rpfb fold › Resuscitation-promoting factor rpfb. 0.50 30.0 3.56e-01 84.0% 86.5%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5041372 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.83 66.0 7.13e-01 100.0% 96.7%
184486 1.1.13.26 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st 0.82 58.0 6.62e-01 100.0% 96.3%
3982237 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.80 53.0 5.94e-01 84.9% 84.7%
3059162 1.1.13.30 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 0.79 74.0 6.99e-01 100.0% 94.4%
3943172 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.77 63.0 6.46e-01 99.1% 91.0%
3964308 1.1.13.37 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2163 0.77 72.0 6.56e-01 100.0% 91.9%
4965596 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.76 54.0 6.01e-01 100.0% 92.9%
3602341 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.75 54.0 5.83e-01 100.0% 87.8%
5017556 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.75 54.0 5.96e-01 100.0% 92.9%
4951403 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.74 54.0 5.83e-01 100.0% 88.9%
4954501 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.74 54.0 5.57e-01 100.0% 80.0%
5018991 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.74 53.0 5.76e-01 100.0% 88.9%
5008430 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.73 53.0 5.79e-01 100.0% 92.9%
4966449 1.1.13.72 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CBS 0.73 53.0 5.57e-01 100.0% 84.2%
4954552 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.71 65.0 5.61e-01 100.0% 81.9%
2832216 1.1.5.24 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.67 60.0 5.32e-01 100.0% 91.5%
3716385 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 46.0 4.23e-01 92.5% 72.1%
3618300 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 42.0 3.94e-01 100.0% 66.2%
4016816 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 31.0 3.40e-01 86.8% 69.4%
3497315 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.53 38.0 3.64e-01 84.9% 65.0%
4020238 1.1.7.4 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 0.51 42.0 3.81e-01 100.0% 65.3%
3459363 243.3.1.74 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF1668 0.51 32.0 3.51e-01 100.0% 78.8%
3594165 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.50 36.0 3.15e-01 93.4% 47.6%
D2 high residues 128-216
PDB
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3gr5A01 3.55.50.30 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.80 66.0 6.74e-01 100.0% 91.8%
1wruA02 3.55.50.10 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains 0.77 69.0 6.97e-01 100.0% 97.7%
3adyA00 3.55.50.60 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › DotD protein 0.71 62.0 5.95e-01 100.0% 82.4%
4e9jB01 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.71 56.0 4.87e-01 94.4% 55.1%
3gs9A02 3.55.50.40 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.71 60.0 5.99e-01 100.0% 90.2%
4m0nA02 3.55.50.30 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.70 54.0 5.68e-01 92.1% 94.8%
2a02A01 3.55.50.30 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.69 53.0 5.70e-01 96.6% 100.0%
7pmpA01 3.55.50.30 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.67 52.0 5.56e-01 91.0% 100.0%
3ov5A00 3.55.50.70 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.66 54.0 5.53e-01 95.5% 94.0%
3ehgA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.57 46.0 4.07e-01 85.4% 98.4%
4r3aA02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.55 44.0 3.69e-01 84.3% 66.2%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 25.0 2.82e-01 71.9% 53.6%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4809347 3070.1.1.16 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF30637 0.87 72.0 7.49e-01 100.0% 93.9%
5002751 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.84 71.0 7.32e-01 100.0% 94.1%
3966286 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.81 63.0 6.83e-01 95.5% 97.3%
3948421 3070.1.1.2 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD 0.81 68.0 7.00e-01 100.0% 94.1%
4480906 3070.1.1.10 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 0.81 65.0 6.79e-01 100.0% 95.0%
1389175 3070.1.1.10 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 0.80 66.0 6.83e-01 100.0% 95.1%
3982238 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.80 64.0 6.38e-01 96.6% 83.3%
4889789 3070.1.1.16 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF30637 0.80 67.0 6.84e-01 100.0% 93.0%
3974036 3070.1.1.10 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › T3S_SPI-1_N0 0.80 62.0 6.70e-01 98.9% 98.7%
4087530 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.79 63.0 6.72e-01 98.9% 100.0%
4048982 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.79 64.0 6.69e-01 100.0% 96.2%
4008875 3070.1.1.4 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN 0.79 61.0 6.56e-01 95.5% 97.3%
3977381 3070.1.1.2 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD 0.78 66.0 6.73e-01 100.0% 94.1%
185652 3070.1.1.4 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN 0.78 62.0 5.46e-01 98.9% 59.4%
3948879 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.78 61.0 6.57e-01 100.0% 100.0%
3981376 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.77 60.0 6.49e-01 98.9% 98.7%
3941987 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.77 66.0 6.77e-01 100.0% 97.6%
185933 3070.1.1.12 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Gp44-like_2nd 0.77 69.0 6.97e-01 100.0% 97.7%
4957566 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.77 69.0 6.94e-01 100.0% 95.6%
1815424 3070.1.1.4 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN 0.75 58.0 6.27e-01 100.0% 100.0%
4484921 3070.1.1.11 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 0.73 60.0 6.28e-01 94.4% 97.5%
185292 3070.1.1.18 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › PF26674 0.71 60.0 6.06e-01 100.0% 93.3%
3967139 3070.1.1.11 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 0.71 55.0 5.79e-01 93.3% 93.8%
4339226 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.70 59.0 6.07e-01 100.0% 96.5%
3964700 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.69 55.0 5.76e-01 84.3% 97.5%
3974185 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.69 51.0 5.41e-01 91.0% 91.0%
1108144 3070.1.1.7 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › FecR_C 0.68 52.0 5.38e-01 92.1% 86.9%
3974527 3070.1.1.4 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN 0.68 51.0 5.05e-01 93.3% 74.7%
1116063 3070.1.1.4 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN 0.68 53.0 5.23e-01 98.9% 79.6%
3972068 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.68 56.0 5.64e-01 94.4% 88.9%
1833073 3070.1.1.11 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 0.67 53.0 5.52e-01 94.4% 92.7%
3972661 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.67 51.0 5.41e-01 92.1% 96.0%
4034461 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.67 60.0 5.79e-01 100.0% 93.0%
2883219 3070.1.1.11 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › type_II_gspD_N0 0.66 51.0 5.13e-01 91.0% 82.2%
3511355 3070.1.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins 0.66 59.0 5.43e-01 100.0% 98.3%
4531399 3070.1.1.4 a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › STN 0.65 49.0 5.04e-01 94.4% 85.9%
5045943 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.54 38.0 3.23e-01 74.2% 91.0%
4973244 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.54 38.0 3.20e-01 75.3% 92.6%
3595128 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.53 35.0 4.06e-01 89.9% 93.8%
5015326 328.5.1.0 a+b two layers › IF3-like › SirA-like › SirA-like 0.52 32.0 3.70e-01 92.1% 86.2%
4927590 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.51 33.0 3.65e-01 84.3% 84.3%
D3 high residues 224-248_321-375
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1k28D03 2.40.30.150 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 0.77 71.0 6.68e-01 100.0% 91.6%
1y12B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.75 58.0 4.62e-01 82.5% 78.2%
3d37B01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.74 68.0 5.20e-01 100.0% 47.7%
2p5zX01 2.30.110.50 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.73 65.0 5.09e-01 100.0% 47.0%
3cddA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.73 64.0 4.82e-01 100.0% 41.3%
1wruA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.72 65.0 4.98e-01 100.0% 45.1%
2nwaA01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.67 50.0 5.20e-01 100.0% 85.3%
2wzpP01 2.40.30.210 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.67 54.0 4.92e-01 88.7% 96.3%
3iuwA00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.65 56.0 5.70e-01 100.0% 93.7%
4uhvA01 2.30.110.50 Mainly Beta › Roll › Pnp Oxidase; Chain A › 0.64 57.0 4.31e-01 100.0% 49.2%
1twfB07 2.40.50.150 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain 0.63 44.0 3.87e-01 73.8% 91.1%
4w64B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.63 57.0 4.52e-01 100.0% 73.1%
2pmzB07 2.40.50.150 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain 0.63 44.0 3.80e-01 72.5% 91.1%
3cnrB00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.62 51.0 4.94e-01 100.0% 79.6%
3q0bX00 2.30.280.10 Mainly Beta › Roll › PUA domain-like › SRA-YDG 0.61 54.0 4.45e-01 100.0% 63.5%
2wzpR01 2.30.300.20 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Phage tail base-plate attachment protein, domain D1/D2 0.61 49.0 3.73e-01 100.0% 36.7%
4ci2B02 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.60 55.0 4.71e-01 100.0% 64.8%
3fbqA02 2.60.40.1640 Mainly Beta › Sandwich › Immunoglobulin-like › Conserved domain protein. 0.60 46.0 3.87e-01 82.5% 56.8%
3lnnA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.60 50.0 4.77e-01 98.8% 79.6%
2pb7A01 2.30.280.10 Mainly Beta › Roll › PUA domain-like › SRA-YDG 0.60 53.0 4.11e-01 100.0% 65.0%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.59 42.0 4.28e-01 97.5% 75.9%
1dr9A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 44.0 4.16e-01 78.8% 66.3%
4kktA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.59 50.0 4.66e-01 100.0% 74.3%
4wsqB00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.58 44.0 2.95e-01 81.2% 23.9%
3s9xA00 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.58 50.0 4.08e-01 100.0% 79.2%
1vq8S00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.58 44.0 4.47e-01 97.5% 81.5%
4lfhD02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 38.0 3.80e-01 77.5% 64.7%
6x4tA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 40.0 4.00e-01 75.0% 69.4%
7cayA01 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.57 49.0 4.55e-01 100.0% 76.0%
7k0xA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 38.0 3.93e-01 78.8% 71.8%
5mmiU01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.57 44.0 4.39e-01 97.5% 80.5%
3pg1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 43.0 3.67e-01 81.2% 64.3%
2e9wB05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 42.0 4.04e-01 78.8% 69.2%
3of6E00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 40.0 3.75e-01 77.5% 65.4%
2gksB01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.55 49.0 4.07e-01 100.0% 90.1%
2w59A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 39.0 3.68e-01 77.5% 67.0%
4lzkA00 2.60.40.3910 Mainly Beta › Sandwich › Immunoglobulin-like › Inclusion body protein 0.54 47.0 3.78e-01 97.5% 94.3%
3d85D02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 40.0 3.75e-01 82.5% 64.2%
5w7tA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 40.0 3.78e-01 81.2% 76.3%
3d2uA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 39.0 3.73e-01 77.5% 71.7%
6n3oA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 39.0 3.84e-01 81.2% 80.0%
2ausC02 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.52 40.0 3.08e-01 83.7% 36.5%
8fd9A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 40.0 4.07e-01 81.2% 85.7%
4rm7A02 2.40.110.10 Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.52 45.0 4.13e-01 100.0% 82.6%
1juvA00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.52 39.0 2.96e-01 80.0% 90.7%
3o4oB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 38.0 3.49e-01 78.8% 68.8%
2gjvA00 3.30.2000.10 Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like 0.52 42.0 3.66e-01 95.0% 85.3%
2pziB02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 40.0 3.37e-01 87.5% 88.3%
1k8wA01 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.51 39.0 2.92e-01 86.3% 63.9%
3g2fA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 38.0 3.73e-01 81.2% 81.6%
3e23A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 42.0 3.23e-01 93.8% 97.5%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3981227 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.89 76.0 7.82e-01 100.0% 94.7%
3973341 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.85 72.0 7.06e-01 100.0% 84.7%
3943170 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.82 74.0 7.09e-01 100.0% 84.4%
5002753 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.82 76.0 7.49e-01 100.0% 92.9%
4647050 1.1.13.56 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › YQBQ 0.79 70.0 7.01e-01 100.0% 93.8%
5041375 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.79 67.0 6.42e-01 100.0% 80.0%
4957568 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.78 72.0 7.10e-01 100.0% 95.3%
4889790 3071.1.1.7 a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › PF30637 0.77 72.0 5.52e-01 100.0% 93.4%
5002662 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.75 70.0 6.42e-01 100.0% 81.0%
4888819 1.1.13.10 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage-tail_1 0.75 62.0 5.51e-01 88.7% 96.4%
4031753 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.75 65.0 6.17e-01 100.0% 80.0%
3943689 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.75 69.0 6.14e-01 100.0% 85.5%
3978576 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.74 68.0 6.06e-01 100.0% 84.5%
3511358 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.74 68.0 6.25e-01 100.0% 95.0%
3943691 1.1.13.5 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.73 56.0 5.30e-01 81.2% 98.9%
3944430 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.73 67.0 6.09e-01 100.0% 86.7%
5056723 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.73 55.0 5.20e-01 97.5% 67.4%
3945543 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.72 64.0 6.30e-01 100.0% 89.4%
4033372 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.72 67.0 5.93e-01 100.0% 77.3%
3970830 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.72 66.0 6.11e-01 100.0% 85.0%
2475125 3071.1.1.7 a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › PF30637 0.71 64.0 5.09e-01 98.8% 90.5%
3974369 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.71 62.0 6.09e-01 100.0% 89.4%
2674670 1.1.13.6 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.71 56.0 4.39e-01 86.3% 75.0%
2642579 1.1.13.6 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.70 55.0 4.71e-01 86.3% 93.1%
5002750 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.70 56.0 5.11e-01 87.5% 100.0%
3590379 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.68 62.0 5.95e-01 100.0% 92.2%
4562905 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.66 50.0 4.39e-01 82.5% 71.2%
4033714 1.1.13.7 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tail 0.66 59.0 5.62e-01 100.0% 86.3%
4810019 1.1.13.57 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 0.66 52.0 4.77e-01 88.7% 94.5%
4608778 1.1.7.107 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 0.65 53.0 4.67e-01 98.8% 60.0%
3972305 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.65 59.0 5.70e-01 100.0% 92.2%
3966429 1.1.13.5 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.65 59.0 5.69e-01 100.0% 92.2%
5082881 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.65 57.0 4.97e-01 100.0% 88.8%
4059301 1.1.13.47 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like 0.64 58.0 5.23e-01 100.0% 92.7%
3590201 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.64 59.0 5.29e-01 100.0% 88.0%
3974181 1.1.5.88 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PF29489 0.63 53.0 5.08e-01 100.0% 80.0%
3164699 1.1.13.33 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N 0.63 57.0 5.06e-01 100.0% 93.0%
4247994 1.1.13.5 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.63 57.0 5.32e-01 100.0% 94.0%
4943219 205.1.1.123 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer2_BFD 0.63 50.0 4.08e-01 87.5% 87.1%
4929587 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.63 56.0 5.39e-01 100.0% 95.6%
3948350 1.1.13.5 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD 0.62 56.0 5.24e-01 100.0% 93.0%
4959074 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 55.0 4.75e-01 96.2% 74.2%
4319057 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.62 53.0 4.73e-01 100.0% 67.0%
3261290 11.1.1.843 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 0.62 45.0 3.90e-01 77.5% 56.8%
1914511 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.62 52.0 4.52e-01 95.0% 63.0%
5003311 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.61 56.0 5.00e-01 100.0% 90.9%
4094235 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.61 54.0 4.68e-01 98.8% 64.0%
3970827 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.61 55.0 5.41e-01 100.0% 95.3%
4036849 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.61 53.0 4.53e-01 98.8% 62.4%
3831982 1.1.9.4 beta barrels › cradle loop barrel › RIFT-related › PUA domain › SAD_SRA 0.60 53.0 3.97e-01 100.0% 50.0%
3678951 304.102.1.4 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N 0.60 44.0 3.24e-01 78.8% 55.7%
3535347 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 55.0 4.83e-01 100.0% 84.3%
3232202 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 43.0 3.63e-01 77.5% 62.1%
3391409 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 47.0 3.90e-01 90.0% 65.8%
3836146 1.1.9.4 beta barrels › cradle loop barrel › RIFT-related › PUA domain › SAD_SRA 0.59 51.0 4.28e-01 100.0% 71.0%
4954540 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.58 52.0 4.66e-01 98.8% 91.8%
4201836 304.102.1.3 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.57 46.0 3.37e-01 91.3% 70.8%
4214918 304.102.1.3 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.57 46.0 3.39e-01 91.3% 72.1%
None 0.56 42.0 2.83e-01 78.8% 24.6%
4103990 304.102.1.7 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C 0.56 45.0 3.28e-01 87.5% 75.7%
3451490 1.1.9.4 beta barrels › cradle loop barrel › RIFT-related › PUA domain › SAD_SRA 0.56 49.0 3.65e-01 100.0% 47.9%
4466500 304.102.1.3 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.56 46.0 3.25e-01 91.3% 67.8%
4042102 304.102.1.3 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.56 45.0 3.29e-01 91.3% 71.4%
3807657 304.102.1.6 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 0.56 46.0 3.29e-01 91.3% 62.4%
4029996 304.102.1.3 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.56 46.0 3.10e-01 91.3% 60.3%
3465961 304.102.1.6 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 0.55 45.0 3.38e-01 91.3% 62.4%
4945745 304.102.1.7 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C 0.55 45.0 3.27e-01 91.3% 76.7%
4028779 304.102.1.3 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.55 45.0 3.13e-01 92.5% 72.0%
3653406 304.12.1.9 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › DUF7049 0.55 40.0 4.18e-01 77.5% 97.1%
5043875 304.102.1.3 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.55 44.0 3.20e-01 91.3% 61.2%
3915850 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.55 40.0 2.51e-01 78.8% 13.9%
3428351 304.102.1.6 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 0.54 42.0 3.27e-01 86.3% 61.5%
4664026 304.102.1.3 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.54 43.0 3.13e-01 91.3% 68.6%
D4 high residues 252-319
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wruA03 3.30.1920.10 Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Baseplate protein-like domains - 2 layer sandwich fold 0.75 57.0 6.16e-01 100.0% 96.4%
3ga2A00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.71 53.0 3.63e-01 79.4% 83.5%
6vv5A01 2.60.40.3130 Mainly Beta › Sandwich › Immunoglobulin-like › Coronavirus S1 glycoprotein, central receptor binding domain (RBD) 0.67 45.0 3.70e-01 72.1% 38.8%
1wn9A00 3.40.1530.10 Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1805 › TTHA1528-like 0.62 51.0 4.22e-01 92.6% 72.2%
6w9rB01 3.90.70.80 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.62 49.0 3.66e-01 83.8% 79.9%
3njfA00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.61 43.0 3.64e-01 73.5% 44.6%
3exqA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.60 41.0 3.25e-01 72.1% 66.0%
3ssoA01 3.30.1050.30 Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › 0.59 50.0 3.83e-01 92.6% 66.2%
4f87B00 3.30.720.190 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.57 47.0 4.88e-01 92.6% 100.0%
4axhA03 3.30.1050.10 Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain 0.57 46.0 3.72e-01 86.8% 64.1%
8p5sA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.57 41.0 2.86e-01 77.9% 89.4%
1c44A00 3.30.1050.10 Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain 0.56 50.0 4.07e-01 97.1% 76.4%
2ltsA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 40.0 3.72e-01 94.1% 59.3%
4nurA03 3.30.1050.10 Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain 0.56 45.0 3.68e-01 88.2% 61.8%
2cfuA03 3.30.1050.10 Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain 0.56 45.0 3.66e-01 86.8% 63.6%
2d3aA01 3.10.20.70 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain 0.54 37.0 3.30e-01 72.1% 82.2%
2nbmA00 3.30.1050.10 Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain 0.54 47.0 4.02e-01 97.1% 73.0%
3hhmA03 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.54 39.0 3.11e-01 77.9% 42.6%
4a55A01 3.10.20.770 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.53 39.0 2.53e-01 77.9% 19.0%
3cerC01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 41.0 3.36e-01 83.8% 96.9%
2yv9A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 45.0 3.93e-01 100.0% 69.1%
1uisA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.52 43.0 3.06e-01 94.1% 95.1%
2qejD01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.52 38.0 3.18e-01 79.4% 44.9%
3ai4A00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.50 42.0 2.92e-01 95.6% 84.8%
1kcxA01 2.30.40.10 Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 0.50 40.0 3.61e-01 92.6% 72.8%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5002661 3071.1.1.0 a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins 0.79 69.0 7.10e-01 98.5% 98.5%
3505996 2484.1.1.114 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Med13_C 0.76 51.0 4.06e-01 70.6% 60.7%
3973343 3071.1.1.0 a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins 0.74 62.0 6.38e-01 100.0% 95.4%
3980575 3071.1.1.0 a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins 0.74 68.0 6.77e-01 100.0% 97.1%
4957567 3071.1.1.0 a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins 0.69 63.0 6.28e-01 100.0% 98.6%
2468520 3071.1.1.0 a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins 0.68 63.0 6.01e-01 100.0% 96.1%
3878642 2484.1.1.4 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H 0.68 54.0 3.89e-01 85.3% 70.8%
3733008 2484.1.1.114 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Med13_C 0.67 55.0 3.49e-01 88.2% 69.1%
3192419 2484.1.1.114 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Med13_C 0.67 53.0 3.60e-01 85.3% 88.5%
3497856 2484.1.1.114 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Med13_C 0.67 51.0 3.87e-01 82.4% 87.7%
3208775 2484.1.1.114 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Med13_C 0.66 53.0 3.66e-01 88.2% 91.1%
4022865 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.65 53.0 3.64e-01 88.2% 94.4%
4411984 2484.1.1.114 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Med13_C 0.64 50.0 3.62e-01 82.4% 57.8%
3618613 226.1.1.0 a+b two layers › POZ domain › POZ domain › POZ domain 0.63 56.0 4.15e-01 100.0% 71.4%
136740 2484.1.1.4 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H 0.62 51.0 4.01e-01 89.7% 88.1%
3243039 268.1.1.1 a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 0.62 53.0 4.36e-01 97.1% 66.2%
3249764 2484.1.1.114 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Med13_C 0.62 54.0 3.64e-01 94.1% 83.0%
3960454 268.1.1.0 a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related 0.62 45.0 4.07e-01 76.5% 57.8%
3677752 2484.1.1.114 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Med13_C 0.61 53.0 3.66e-01 95.6% 80.4%
2429582 65.1.1.0 beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.60 42.0 4.79e-01 76.5% 100.0%
4200322 2484.1.1.114 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Med13_C 0.59 53.0 3.45e-01 100.0% 73.0%
3905063 268.1.1.1 a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 0.59 48.0 4.65e-01 86.8% 81.3%
5053269 268.1.1.1 a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 0.59 48.0 3.87e-01 86.8% 64.0%
3717226 226.1.1.6 a+b two layers › POZ domain › POZ domain › POZ domain › SANBR_BTB 0.59 46.0 3.38e-01 83.8% 56.0%
427824 268.1.1.5 a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › MycE_N 0.58 49.0 3.74e-01 94.1% 62.5%
3278880 268.1.1.1 a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 0.58 50.0 4.14e-01 95.6% 70.8%
3641026 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.57 44.0 3.31e-01 85.3% 90.0%
5071420 268.1.1.0 a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related 0.57 48.0 4.01e-01 91.2% 77.4%
4974758 2008.1.1.51 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › McrBC 0.57 43.0 3.36e-01 82.4% 100.0%
3953478 2002.1.1.83 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.56 42.0 2.75e-01 82.4% 100.0%
3847997 239.4.1.1 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.56 38.0 3.27e-01 70.6% 77.1%
3245255 239.4.1.0 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain 0.54 37.0 3.20e-01 70.6% 76.2%
4864058 4987.1.1.1 few secondary structure elements › Ribosomal protein L31p › Ribosomal protein L31p › Ribosomal protein L31p › Ribosomal_L31 0.54 36.0 3.82e-01 85.3% 77.0%
3957099 268.1.1.4 a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › Alkyl_sulf_C 0.54 47.0 3.94e-01 95.6% 67.8%
3467205 192.18.1.0 alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.54 44.0 2.74e-01 95.6% 96.7%
1552240 252.1.1.1 a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD 0.54 39.0 3.45e-01 79.4% 72.5%
3376331 10.35.1.2 beta sandwiches › jelly-roll › ER-derived vesicles protein Erv41p lumenal domain › ER-derived vesicles protein Erv41p lumenal domain › COPIIcoated_ERV 0.54 38.0 2.73e-01 73.5% 56.3%
4085794 226.1.1.6 a+b two layers › POZ domain › POZ domain › POZ domain › SANBR_BTB 0.53 42.0 3.09e-01 86.8% 52.4%
5037895 268.1.1.0 a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related 0.52 43.0 3.63e-01 94.1% 65.6%
3916184 221.1.1.168 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PI3K_rbd, PI3K_p85B 0.52 38.0 2.49e-01 77.9% 18.7%
3982093 268.1.1.1 a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 0.52 43.0 3.45e-01 92.6% 57.1%
4513981 239.4.1.1 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.52 38.0 3.12e-01 76.5% 69.2%
1497987 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 44.0 3.14e-01 97.1% 91.1%
2898325 271.1.1.2 beta barrels › GFP-like › GFP-like › GFP-like 0.52 43.0 2.85e-01 94.1% 97.7%
3260081 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.52 47.0 3.40e-01 100.0% 74.6%
3922240 3755.3.1.321 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › WHAMM-JMY_N 0.52 44.0 3.80e-01 95.6% 88.2%
401471 271.1.1.0 beta barrels › GFP-like › GFP-like › GFP-like 0.50 42.0 2.92e-01 95.6% 84.8%
2093586 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.50 42.0 2.97e-01 95.6% 90.8%
4979270 268.1.1.1 a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 0.50 44.0 3.80e-01 97.1% 78.1%