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LC644975.1__BCZ76083.1__X__00078
Bact-VirLC644975.1__BCZ76083.1__X__00078
Identity
- Accession:
- LC644975 ↗
- Kingdom:
- phage
Quality
91.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 110-203
Domain cluster:
rep: MT711888.1__QNJ57336.1__Dolphis_29__00029__D178-264
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF27728.1 best | UCP028438 | 94.1 | 1.30e-26 | 98.9% | 46.0% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6vhvA01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.70 | 45.0 | 4.58e-01 | 100.0% | 66.7% |
| 3iplA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.68 | 46.0 | 4.85e-01 | 100.0% | 78.3% |
| 5nfmA00 | 3.30.300.90 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like | 0.67 | 47.0 | 5.22e-01 | 100.0% | 92.0% |
| 4isbB02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.66 | 48.0 | 4.66e-01 | 100.0% | 67.3% |
| 1nnnA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.66 | 47.0 | 4.31e-01 | 100.0% | 57.9% |
| 8affD01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.65 | 45.0 | 4.83e-01 | 100.0% | 85.9% |
| 5uptA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.65 | 45.0 | 4.30e-01 | 100.0% | 62.6% |
| 3bioA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.63 | 43.0 | 4.04e-01 | 100.0% | 57.0% |
| 2ixsA02 | 3.40.1350.80 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › BsuBI/PstI restriction endonuclease, C-terminal domain | 0.63 | 41.0 | 3.40e-01 | 100.0% | 38.9% |
| 3n2qA02 | 3.30.300.190 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.62 | 47.0 | 4.38e-01 | 100.0% | 63.8% |
| 4wd1A02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.62 | 42.0 | 3.82e-01 | 100.0% | 50.8% |
| 4g1iA02 | 3.30.300.170 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.61 | 42.0 | 4.64e-01 | 100.0% | 93.0% |
| 1ib8A01 | 3.30.300.70 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › RimP-like superfamily, N-terminal | 0.60 | 45.0 | 4.79e-01 | 100.0% | 91.6% |
| 1dj0A02 | 3.30.70.580 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, N-terminal subdomain | 0.59 | 41.0 | 3.99e-01 | 100.0% | 63.6% |
| 4jj9C00 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.54 | 49.0 | 4.25e-01 | 100.0% | 72.4% |
| 4y2fA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.53 | 45.0 | 3.93e-01 | 93.6% | 79.0% |
| 1k1gA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.53 | 39.0 | 3.61e-01 | 92.6% | 59.8% |
| 1p7lA03 | 3.30.300.10 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.52 | 43.0 | 4.20e-01 | 100.0% | 81.1% |
| 5ey9A01 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.51 | 46.0 | 4.14e-01 | 100.0% | 73.0% |
| 2jc4A00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.50 | 43.0 | 3.27e-01 | 100.0% | 93.0% |
| 8dqaA01 | 3.30.429.10 | Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor | 0.50 | 43.0 | 4.24e-01 | 100.0% | 90.8% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3956580 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.74 | 49.0 | 4.66e-01 | 100.0% | 58.2% |
| 5070009 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.71 | 44.0 | 5.20e-01 | 100.0% | 90.8% |
| 5028785 | 327.11.1.5 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_7 | 0.70 | 42.0 | 4.84e-01 | 100.0% | 86.2% |
| 5039586 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.69 | 50.0 | 4.80e-01 | 100.0% | 66.7% |
| 4967193 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.69 | 49.0 | 4.79e-01 | 100.0% | 66.7% |
| 3287751 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.68 | 46.0 | 3.55e-01 | 100.0% | 31.7% |
| 4967068 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.68 | 41.0 | 4.67e-01 | 100.0% | 81.4% |
| 5006380 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.68 | 48.0 | 4.60e-01 | 100.0% | 64.2% |
| 5036382 | 327.7.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › FKBP26_C | 0.67 | 44.0 | 5.12e-01 | 100.0% | 96.9% |
| 4933112 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.66 | 47.0 | 4.14e-01 | 100.0% | 51.1% |
| 3963062 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.66 | 46.0 | 4.33e-01 | 100.0% | 59.1% |
| 3278557 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.66 | 42.0 | 4.26e-01 | 100.0% | 64.2% |
| 3582701 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.66 | 46.0 | 4.37e-01 | 100.0% | 61.8% |
| 4291635 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.65 | 45.0 | 4.34e-01 | 100.0% | 63.8% |
| 5049008 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.65 | 47.0 | 4.54e-01 | 100.0% | 66.4% |
| 4236814 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.65 | 46.0 | 4.30e-01 | 100.0% | 60.0% |
| 4933311 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.64 | 46.0 | 3.98e-01 | 100.0% | 47.3% |
| 3964966 | 102.7.1.1 ↗ | alpha arrays › HhH/H2TH › Baseplate wedge protein gp7 domain IV › Baseplate wedge protein gp7 domain IV › Tail_P2_I | 0.64 | 53.0 | 4.67e-01 | 100.0% | 62.2% |
| 3959580 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.64 | 44.0 | 4.30e-01 | 100.0% | 64.8% |
| 5081615 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.63 | 45.0 | 4.33e-01 | 100.0% | 65.7% |
| 3979017 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.62 | 40.0 | 4.34e-01 | 100.0% | 81.3% |
| 3588726 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.62 | 40.0 | 4.08e-01 | 100.0% | 67.8% |
| 4976681 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.61 | 39.0 | 3.79e-01 | 100.0% | 56.4% |
| 5079512 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.60 | 42.0 | 3.85e-01 | 100.0% | 53.1% |
| 4951957 | 327.5.1.10 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › PF27533 | 0.60 | 45.0 | 4.54e-01 | 100.0% | 77.9% |
| 4067859 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.59 | 41.0 | 3.08e-01 | 100.0% | 27.8% |
| 4521939 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.59 | 42.0 | 3.10e-01 | 100.0% | 27.6% |
| 5002606 | 327.6.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › FeS_assembly_P | 0.59 | 44.0 | 4.60e-01 | 100.0% | 87.1% |
| 3599522 | 327.10.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related | 0.59 | 44.0 | 4.38e-01 | 100.0% | 75.0% |
| 5057477 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 33.0 | 3.30e-01 | 100.0% | 51.0% |
| 3646034 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.57 | 42.0 | 3.60e-01 | 100.0% | 48.0% |
| 4986728 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.57 | 40.0 | 3.82e-01 | 100.0% | 60.9% |
| 5033655 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.56 | 41.0 | 4.20e-01 | 100.0% | 80.0% |
| 5035266 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.53 | 41.0 | 4.31e-01 | 98.9% | 95.2% |
| None | — | 0.52 | 46.0 | 4.04e-01 | 100.0% | 64.8% | |
| 3950132 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.51 | 45.0 | 3.94e-01 | 100.0% | 63.4% |
| 5025075 | 2002.1.1.79 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 | 0.50 | 35.0 | 2.64e-01 | 72.3% | 55.0% |
D2
medium
residues 6-61
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF27728.1 best | UCP028438 | 75.8 | 5.60e-21 | 100.0% | 27.7% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wujA00 | 6.10.250.660 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.68 | 51.0 | 5.43e-01 | 98.2% | 90.0% |
| 2bskB00 | 1.10.287.810 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains | 0.64 | 51.0 | 4.93e-01 | 96.4% | 76.9% |
| 7ztbB01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.64 | 48.0 | 3.45e-01 | 80.4% | 30.7% |
| 3a8tA02 | 1.10.287.890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain | 0.62 | 55.0 | 4.38e-01 | 100.0% | 83.8% |
| 6cgaC02 | 1.20.58.860 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 51.0 | 4.53e-01 | 96.4% | 66.7% |
| 3nowA02 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.58 | 41.0 | 2.40e-01 | 73.2% | 22.7% |
| 3iylB02 | 1.10.2050.10 | Mainly Alpha › Orthogonal Bundle › Protein mu-1, chain B, domain 3 › Protein mu-1, chain B, domain 3 | 0.56 | 47.0 | 3.64e-01 | 98.2% | 69.4% |
| 2hqmA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 47.0 | 3.12e-01 | 100.0% | 30.7% |
| 3kp1A01 | 3.20.20.440 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › D-Lysine 5,6-aminomutase alpha subunit | 0.53 | 41.0 | 2.45e-01 | 85.7% | 17.7% |
| 3tw8A03 | 6.10.140.1000 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 36.0 | 4.05e-01 | 76.8% | 100.0% |
| 8a0cA01 | 3.40.50.11820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CDP-glycerol glycerophosphotransferase, N-terminal domain | 0.51 | 40.0 | 3.04e-01 | 94.6% | 58.3% |
| 1w36F02 | 1.10.10.160 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.51 | 43.0 | 3.52e-01 | 92.9% | 54.0% |
| 3nv6A00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.50 | 42.0 | 2.56e-01 | 94.6% | 66.1% |
| 2panA03 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.50 | 38.0 | 2.67e-01 | 89.3% | 74.6% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3494678 | 220.1.1.60 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ECT2_PH | 0.73 | 54.0 | 3.52e-01 | 100.0% | 18.7% |
| 4511746 | 150.5.1.51 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100_2 | 0.65 | 58.0 | 4.06e-01 | 100.0% | 84.6% |
| 4628387 | 616.1.1.1 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › Ribosomal_S15 | 0.64 | 51.0 | 4.53e-01 | 91.1% | 72.9% |
| 5074716 | 4163.1.1.0 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like | 0.63 | 51.0 | 3.96e-01 | 94.6% | 40.8% |
| 3210590 | 304.160.1.3 ↗ | a+b two layers › Alpha-beta plaits › Gas vesicle protein GvpF › Gas vesicle protein GvpF › PF28298 | 0.62 | 54.0 | 4.07e-01 | 100.0% | 40.0% |
| 4293297 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.58 | 47.0 | 3.52e-01 | 87.5% | 46.7% |
| 5080148 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.58 | 48.0 | 3.94e-01 | 98.2% | 82.6% |
| 4946950 | 3352.1.1.1 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3 | 0.57 | 50.0 | 2.94e-01 | 100.0% | 70.9% |
| 3363261 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.56 | 43.0 | 3.24e-01 | 82.1% | 84.4% |
| 3655664 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 39.0 | 3.27e-01 | 76.8% | 75.8% |
D3
medium
residues 69-103
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF27728.1 best | UCP028438 | 45.7 | 9.20e-12 | 100.0% | 17.3% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zb9A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 45.0 | 4.12e-01 | 80.0% | 50.0% |
| 3f0cA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 45.0 | 4.11e-01 | 77.1% | 59.2% |
| 3wgbC02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.61 | 47.0 | 3.85e-01 | 100.0% | 89.2% |
| 3u48A02 | 3.40.50.1700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycoside hydrolase family 3 C-terminal domain | 0.61 | 44.0 | 2.65e-01 | 80.0% | 30.9% |
| 3bkxA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 41.0 | 2.44e-01 | 71.4% | 9.2% |
| 3fogA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.59 | 46.0 | 3.47e-01 | 94.3% | 55.9% |
| 1vkuA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.59 | 46.0 | 3.70e-01 | 100.0% | 81.2% |
| 3dfgA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 40.0 | 3.71e-01 | 74.3% | 58.3% |
| 2hydA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.58 | 46.0 | 2.72e-01 | 94.3% | 42.4% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1108136 | 3773.1.1.1 ↗ | few secondary structure elements › E3 ligase HOIP C-terminal domain › E3 ligase HOIP C-terminal domain › E3 ligase HOIP C-terminal domain › E3_UbLigase_RBR | 0.73 | 59.0 | 4.04e-01 | 100.0% | 55.5% |
| 3184513 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.69 | 56.0 | 3.88e-01 | 100.0% | 68.1% |
| 4637053 | 101.35.1.21 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › DUF494 | 0.63 | 46.0 | 4.11e-01 | 85.7% | 56.0% |
| 1519164 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.53 | 45.0 | 2.90e-01 | 100.0% | 45.3% |
| 3285283 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.50 | 44.0 | 2.84e-01 | 100.0% | 35.2% |