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LC644975.1__BCZ76084.1__X__00079
Bact-VirLC644975.1__BCZ76084.1__X__00079
Identity
- Accession:
- LC644975 ↗
- Kingdom:
- phage
Quality
80.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-197
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zruC01 | 2.60.520.10 | Mainly Beta › Sandwich › Triple-stranded beta-helix › Phage fibre proteins | 0.70 | 46.0 | 5.42e-01 | 92.4% | 94.6% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3589732 | 4166.1.1.2 ↗ | beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Caudo_bapla_N | 0.66 | 51.0 | 5.54e-01 | 96.2% | 95.5% |
| 3782159 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.51 | 22.0 | 2.91e-01 | 84.2% | 72.6% |
D2
medium
residues 224-292
D3
medium
residues 408-439_465-549_613-623
Domain cluster:
rep: KM199771.1__AIK68527.1__Lo5R7ANS_57__00057__D358-488_526-544
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1omiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 34.0 | 3.70e-01 | 100.0% | 66.7% |
| 3of1A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 32.0 | 3.22e-01 | 100.0% | 48.9% |
| 4devD01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 34.0 | 3.50e-01 | 99.2% | 60.0% |
| 2qvsB02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 34.0 | 3.39e-01 | 100.0% | 58.0% |
| 1o5lA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 32.0 | 3.21e-01 | 100.0% | 54.3% |
| 3w5nA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 34.0 | 3.12e-01 | 100.0% | 47.3% |
| 6l9iA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 34.0 | 3.02e-01 | 98.4% | 43.9% |
| 4jgjA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 30.0 | 3.32e-01 | 96.9% | 65.7% |
| 2pqqA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 31.0 | 2.96e-01 | 100.0% | 46.9% |
| 5tpvB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 34.0 | 3.38e-01 | 97.7% | 59.4% |
| 3myxB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 32.0 | 3.29e-01 | 100.0% | 63.1% |
| 3no8A00 | 2.60.120.820 | Mainly Beta › Sandwich › Jelly Rolls › PHR domain | 0.52 | 37.0 | 3.43e-01 | 99.2% | 59.2% |
| 1w2tA02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.51 | 41.0 | 4.12e-01 | 99.2% | 81.3% |
| 4ca9A00 | 2.60.120.340 | Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain | 0.50 | 35.0 | 3.87e-01 | 97.7% | 91.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3972519 | 10.12.1.27 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_3 | 0.69 | 32.0 | 3.43e-01 | 100.0% | 47.8% |
| 4528208 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.58 | 34.0 | 4.27e-01 | 97.7% | 95.0% |
| 1281 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.56 | 32.0 | 3.21e-01 | 100.0% | 54.3% |
| 4965895 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 36.0 | 3.99e-01 | 96.9% | 87.0% |
| 3421268 | 10.32.1.38 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Malectin_like | 0.53 | 33.0 | 3.73e-01 | 96.9% | 83.2% |
| 1105 | 10.1.1.26 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C | 0.51 | 41.0 | 4.07e-01 | 99.2% | 79.0% |
| 5041184 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.51 | 28.0 | 3.25e-01 | 89.8% | 73.3% |
D4
medium
residues 440-464_550-612
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1nezH00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 41.0 | 3.72e-01 | 88.6% | 97.5% |