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LC648442.1__BDA82457.1__X__00202

Bact-Vir

LC648442.1__BDA82457.1__X__00202

Identity

Accession:
LC648442 ↗
Kingdom:
phage

Quality

85.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Staphylococcus_phage_vB_SsapH-Golestan-105-M

TaxID: 2872011

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-51
PDB
Domain cluster: representative
D2 high residues 65-121
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1r7lA00 3.30.2120.10 Alpha Beta › 2-Layer Sandwich › Bacillus phage protein › Bacillus phage protein-like 0.84 44.0 3.57e-01 100.0% 29.1%
1sz2A02 3.40.367.20 Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › 0.70 39.0 2.61e-01 100.0% 15.5%
1nbwA05 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 48.0 5.28e-01 87.7% 93.3%
1tr8A01 2.20.70.30 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › Nascent polypeptide-associated complex domain 0.65 45.0 4.73e-01 98.2% 80.8%
1n7oA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.60 42.0 3.76e-01 100.0% 50.6%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 41.0 3.12e-01 77.2% 55.8%
4jzsA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.57 49.0 3.67e-01 100.0% 57.6%
4e5xG00 2.60.40.3530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 41.0 3.32e-01 100.0% 44.4%
2wg5F02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 44.0 4.48e-01 96.5% 100.0%
1twfB07 2.40.50.150 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain 0.54 45.0 3.55e-01 94.7% 47.6%
4e1pA00 3.30.60.230 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain 0.53 31.0 3.15e-01 86.0% 54.5%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.53 33.0 3.18e-01 100.0% 51.4%
3qwbA01 3.90.180.10 Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain 0.51 39.0 2.81e-01 87.7% 60.0%
4r6uA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 39.0 3.36e-01 100.0% 54.5%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5044635 2.21.1.3 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › HTH_OrfB_IS605 0.88 82.0 5.59e-01 100.0% 36.0%
4010838 7000.1.1.1 ↗ alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › HTH_OrfB_IS605 0.84 77.0 5.60e-01 100.0% 40.0%
3947630 2484.1.1.56 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDR 0.68 49.0 2.94e-01 94.7% 10.1%
3519977 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 52.0 4.95e-01 98.2% 94.3%
3497302 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.62 54.0 4.13e-01 100.0% 63.6%
4930180 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 50.0 5.05e-01 93.0% 100.0%
5072502 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 50.0 5.01e-01 98.2% 100.0%
4889436 2.1.1.70 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.60 50.0 4.93e-01 96.5% 93.5%
3771117 2.1.1.237 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30958 0.60 48.0 4.60e-01 93.0% 84.3%
4011957 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 50.0 4.14e-01 100.0% 52.2%
4259370 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 49.0 4.98e-01 93.0% 100.0%
4966535 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 49.0 4.92e-01 98.2% 98.3%
5062579 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 52.0 4.78e-01 100.0% 85.3%
5002450 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 48.0 4.93e-01 93.0% 100.0%
5026606 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 47.0 4.49e-01 98.2% 82.9%
4978946 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 48.0 4.75e-01 98.2% 96.7%
3603358 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 46.0 4.55e-01 96.5% 95.0%
5028053 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 42.0 4.25e-01 86.0% 92.7%
5058672 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 42.0 4.21e-01 94.7% 98.3%
3709649 277.1.1.0 ↗ a+b two layers › PX domain › PX domain › PX domain 0.51 39.0 3.14e-01 89.5% 83.1%
3648115 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.50 36.0 2.87e-01 78.9% 94.1%
D3 high residues 146-219
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01385.26 best OrfB_IS605 38.2 2.10e-09 94.6% 44.2%
CATH (59)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rq0A01 6.10.140.160 Special › Helix non-globular › Helix Hairpins › 0.85 59.0 5.69e-01 73.0% 63.9%
3fxdB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.85 59.0 6.68e-01 79.7% 91.4%
2xzmO02 1.10.287.10 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding 0.85 57.0 5.88e-01 74.3% 72.9%
4aifA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.85 58.0 4.54e-01 70.3% 54.9%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.85 62.0 6.57e-01 77.0% 100.0%
1pd3A00 1.10.287.230 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.84 58.0 6.70e-01 71.6% 100.0%
2f2gA00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.83 58.0 4.02e-01 71.6% 26.0%
2yevC00 6.10.280.110 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.82 61.0 6.61e-01 77.0% 98.4%
3tklB01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.82 61.0 6.64e-01 79.7% 91.9%
4jvyB00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.82 49.0 3.55e-01 75.7% 23.7%
3rkvA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.81 59.0 4.56e-01 74.3% 56.5%
3b2eF00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.81 64.0 6.92e-01 82.4% 98.4%
3u0cA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.81 70.0 5.34e-01 90.5% 76.8%
1zhcA00 6.10.280.50 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 63.0 6.30e-01 83.8% 86.8%
4gouA03 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.80 57.0 4.06e-01 74.3% 47.7%
4a4kA01 1.20.1500.20 Mainly Alpha › Up-down Bundle › YheA-like fold › 0.79 60.0 5.07e-01 78.4% 54.0%
2js5A00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.79 60.0 6.11e-01 79.7% 87.3%
3hiuD00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.78 59.0 4.60e-01 79.7% 40.1%
1vp7A00 1.10.287.1040 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Exonuclease VII, small subunit 0.78 57.0 5.93e-01 77.0% 83.8%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.77 55.0 5.96e-01 75.7% 90.2%
3layF00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.76 68.0 6.75e-01 98.6% 100.0%
3qf7A02 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.76 55.0 5.96e-01 75.7% 93.7%
1x4tA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.76 55.0 6.16e-01 78.4% 98.3%
3axjB01 1.20.58.190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 0.75 58.0 4.51e-01 82.4% 49.0%
1skvA00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.75 60.0 6.43e-01 85.1% 96.9%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.75 65.0 6.42e-01 93.2% 97.4%
3r84B00 6.10.280.160 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 0.74 61.0 5.98e-01 89.2% 93.8%
2o8pA00 1.20.190.20 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › 14-3-3 domain 0.74 64.0 4.51e-01 94.6% 33.3%
4pdyA02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.73 50.0 3.45e-01 70.3% 25.3%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.73 63.0 6.19e-01 93.2% 93.7%
3rlfF01 1.20.58.370 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › MalF N-terminal region-like 0.73 49.0 4.68e-01 78.4% 59.3%
1cxzB00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.73 62.0 5.88e-01 90.5% 83.7%
1t7sA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.73 61.0 5.06e-01 90.5% 55.8%
1k90B03 1.20.140.60 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.73 51.0 4.38e-01 73.0% 47.0%
2q0oC00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.73 61.0 5.82e-01 90.5% 83.7%
3syvA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.73 62.0 4.27e-01 93.2% 30.2%
3pt1A02 1.20.930.60 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › 0.72 57.0 4.75e-01 82.4% 75.8%
4okvE00 6.10.140.1890 Special › Helix non-globular › Helix Hairpins › 0.72 57.0 6.01e-01 95.9% 95.4%
4iloA00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.72 63.0 4.37e-01 94.6% 32.2%
2yevA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.72 58.0 5.80e-01 91.9% 85.1%
3fppA03 6.10.140.1990 Special › Helix non-globular › Helix Hairpins › 0.72 62.0 5.85e-01 95.9% 97.7%
1wpaA01 6.10.140.340 Special › Helix non-globular › Helix Hairpins › 0.72 58.0 5.22e-01 86.5% 98.0%
3mq1A01 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 62.0 5.75e-01 93.2% 75.0%
4abxA02 6.10.140.1090 Special › Helix non-globular › Helix Hairpins › 0.71 54.0 5.19e-01 82.4% 74.7%
1kxpD02 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.70 53.0 5.02e-01 81.1% 68.2%
4ceiA03 6.10.250.2380 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.70 59.0 5.11e-01 90.5% 97.3%
2p4vA01 1.10.287.180 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain 0.70 52.0 5.21e-01 82.4% 78.9%
3qo8A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.69 60.0 5.32e-01 94.6% 98.1%
2q12A00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.68 61.0 4.22e-01 97.3% 64.9%
4fzsA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.68 61.0 4.37e-01 97.3% 80.9%
2l35A00 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.68 52.0 5.56e-01 91.9% 96.8%
2np9A01 1.20.58.1300 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.68 48.0 4.03e-01 75.7% 91.0%
2dw4A03 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.68 59.0 5.31e-01 94.6% 69.3%
6xj1A01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.68 58.0 3.99e-01 93.2% 29.0%
2db7A01 6.10.250.980 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.67 46.0 5.29e-01 71.6% 100.0%
1tjlA00 1.20.120.910 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain 0.64 55.0 4.39e-01 93.2% 50.3%
1xfiA02 1.20.1700.10 Mainly Alpha › Up-down Bundle › AF1104-like › AF1104-like 0.63 46.0 4.37e-01 78.4% 66.7%
1vf7A03 1.10.287.470 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.60 44.0 4.68e-01 78.4% 96.7%
4gyvE00 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.58 48.0 3.58e-01 95.9% 39.1%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4972401 2484.1.1.124 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.90 81.0 5.59e-01 100.0% 32.6%
5017725 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.90 81.0 5.73e-01 100.0% 35.9%
4999337 2484.1.1.124 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.89 80.0 6.08e-01 100.0% 45.2%
3795985 622.4.1.0 ↗ alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.89 61.0 5.77e-01 70.3% 61.2%
4998819 2484.1.1.124 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.89 78.0 6.32e-01 100.0% 53.1%
4977429 2484.1.1.124 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.88 79.0 6.20e-01 100.0% 50.0%
5005094 2484.1.1.124 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.88 79.0 5.60e-01 100.0% 35.9%
5032045 4163.1.1.0 ↗ alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like 0.88 67.0 5.97e-01 79.7% 59.0%
4978165 2484.1.1.124 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.87 76.0 5.41e-01 100.0% 34.5%
4939089 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.86 59.0 3.81e-01 71.6% 18.4%
3286637 2484.1.1.124 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.86 75.0 5.69e-01 100.0% 42.4%
4999065 2484.1.1.124 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.85 80.0 6.11e-01 100.0% 48.4%
3669818 3922.1.1.284 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › PF29520 0.85 75.0 5.39e-01 94.6% 41.1%
4977784 2484.1.1.302 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.84 79.0 5.38e-01 100.0% 31.5%
3651038 192.29.1.221 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PF29520 0.84 73.0 5.96e-01 93.2% 54.6%
4590389 4163.1.1.1 ↗ alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 0.84 66.0 5.10e-01 83.8% 76.1%
5020701 3755.3.1.637 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.83 58.0 3.94e-01 71.6% 22.6%
3676043 5076.2.1.10 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › PF29520 0.83 73.0 4.78e-01 94.6% 26.3%
4933354 3755.3.1.637 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.83 62.0 4.21e-01 78.4% 24.2%
4581983 5086.1.1.13 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › T3SSipB 0.83 68.0 5.42e-01 87.8% 85.7%
5070360 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.82 62.0 4.79e-01 79.7% 86.5%
3783731 2004.1.1.505 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_30 0.82 62.0 3.77e-01 79.7% 14.0%
3681637 603.1.1.5 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N 0.81 65.0 4.83e-01 85.1% 36.0%
4259224 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.81 71.0 5.48e-01 94.6% 66.5%
3348106 5076.2.1.10 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › PF29520 0.81 72.0 4.77e-01 94.6% 39.3%
4982777 3291.1.1.238 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › DUF7121 0.81 59.0 4.10e-01 77.0% 24.8%
3742811 604.6.1.1 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT 0.81 60.0 5.04e-01 77.0% 49.6%
3346803 5076.2.1.10 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › PF29520 0.80 71.0 4.58e-01 94.6% 35.1%
4958743 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.80 69.0 5.90e-01 93.2% 63.5%
3817615 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.80 63.0 5.55e-01 85.1% 59.0%
3418848 5076.2.1.10 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › PF29520 0.79 70.0 4.56e-01 95.9% 25.7%
3990182 3922.1.1.226 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Fy-3 0.79 70.0 5.99e-01 95.9% 65.2%
3642421 603.1.1.5 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N 0.79 66.0 5.41e-01 89.2% 52.0%
3098420 4006.1.1.1 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF 0.79 59.0 5.13e-01 78.4% 88.1%
3894565 4207.1.2.65 ↗ alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › OLF 0.78 66.0 4.04e-01 89.2% 17.0%
3874130 133.1.1.5 ↗ alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › DH_Alsin 0.78 68.0 4.79e-01 93.2% 47.1%
2456957 192.13.1.1 ↗ alpha bundles › Long alpha-hairpin › ISY1 N-terminal domain-like › ISY1 N-terminal domain-like › Isy1 0.77 56.0 6.34e-01 77.0% 100.0%
4961507 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.77 67.0 4.14e-01 93.2% 19.0%
5070059 3834.1.1.25 ↗ alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › DUF7121 0.77 63.0 4.25e-01 98.6% 25.6%
3719591 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.77 67.0 4.69e-01 93.2% 57.7%
3623143 192.4.1.0 ↗ alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) 0.77 66.0 6.24e-01 90.5% 82.4%
4146694 192.29.1.277 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Dynamitin 0.77 60.0 6.36e-01 83.8% 92.3%
4959101 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.77 65.0 4.43e-01 90.5% 58.0%
4667859 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.76 69.0 5.87e-01 97.3% 90.4%
4349607 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.76 67.0 5.79e-01 94.6% 90.9%
3619200 192.15.1.76 ↗ alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › CUPID 0.76 60.0 4.63e-01 85.1% 39.4%
4001531 5001.1.1.23 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › GOST_TM 0.76 70.0 4.60e-01 100.0% 26.3%
3794795 603.1.1.3 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › V-SNARE 0.76 63.0 5.64e-01 89.2% 67.0%
3995124 632.8.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 0.75 65.0 5.41e-01 93.2% 65.6%
4998688 192.2.1.89 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › DUF7121 0.75 66.0 4.52e-01 94.6% 52.2%
5038847 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.75 62.0 6.42e-01 90.5% 98.6%
3678444 5076.2.1.10 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › PF29520 0.75 68.0 4.48e-01 100.0% 25.5%
3755476 3755.1.1.0 ↗ alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related 0.75 64.0 4.74e-01 90.5% 41.7%
3408277 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.75 68.0 5.77e-01 97.3% 98.3%
4214499 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.74 62.0 6.36e-01 90.5% 92.9%
3594586 192.7.1.0 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.74 63.0 5.76e-01 90.5% 75.8%
3356933 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.73 61.0 4.72e-01 89.2% 43.2%
4883924 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.73 61.0 5.97e-01 89.2% 85.0%
5005724 3755.3.1.637 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.73 63.0 4.40e-01 94.6% 69.4%
5009681 5069.1.1.0 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes 0.73 67.0 5.33e-01 100.0% 90.7%
3962991 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.72 62.0 4.62e-01 95.9% 80.5%
3192393 2004.1.1.430 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, ABC_tran_Xtn 0.72 61.0 3.54e-01 90.5% 22.6%
3615269 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.72 63.0 4.47e-01 94.6% 38.1%
3271963 133.1.1.1 ↗ alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF 0.71 56.0 4.21e-01 82.4% 52.1%
3215465 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.71 61.0 5.03e-01 93.2% 60.0%
4541195 3755.3.1.470 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › T3SSipB 0.71 60.0 4.93e-01 91.9% 58.5%
3361162 632.22.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.70 60.0 4.96e-01 91.9% 58.4%
3224003 9001.1.1.3 ↗ alpha bundles › TMEM120/ELO/TLC › TMEM120/ELO/TLC › TMEM120/ELO/TLC › TMPIT 0.70 58.0 5.70e-01 90.5% 83.7%
3841109 192.29.1.293 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › SHCBP_N 0.70 62.0 5.59e-01 97.3% 79.0%
4231809 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.69 60.0 3.69e-01 100.0% 37.5%
4966687 192.3.1.1 ↗ alpha bundles › Long alpha-hairpin › Fe,Mn superoxide dismutase (SOD), N-terminal domain › Fe,Mn superoxide dismutase (SOD), N-terminal domain › Sod_Fe_N 0.68 54.0 5.21e-01 86.5% 84.7%
3964578 5094.1.1.1 ↗ a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › OmpH 0.68 60.0 4.86e-01 97.3% 59.3%
3731259 5042.1.1.1 ↗ extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › CorA 0.68 62.0 4.63e-01 100.0% 52.0%
3586751 4177.1.1.0 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.65 55.0 4.23e-01 97.3% 77.2%
4940229 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.62 51.0 3.31e-01 94.6% 21.1%