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LC667450.1__BDD79373.1__X__00091

Bact-Vir

LC667450.1__BDD79373.1__X__00091

Identity

Accession:
LC667450 ↗
Kingdom:
phage

Quality

81.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Chiangmaivirus› Burkholderia_phage_FLC8

TaxID: 2906466

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 37-86
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yloE02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.69 60.0 5.08e-01 100.0% 97.6%
4gr5C01 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.68 42.0 3.93e-01 82.0% 48.4%
1f39A00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.66 57.0 4.58e-01 100.0% 54.5%
1i9gA01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.64 50.0 4.69e-01 88.0% 95.3%
1jheA00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.63 52.0 4.04e-01 100.0% 44.4%
3hu1A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.63 52.0 4.36e-01 100.0% 84.4%
1xr0B01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 46.0 3.89e-01 84.0% 80.2%
5eqjB01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.61 48.0 4.35e-01 88.0% 85.9%
2pwyA01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.61 45.0 4.34e-01 80.0% 98.2%
1o54A01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.60 45.0 4.14e-01 88.0% 84.7%
2kqaA00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.60 49.0 3.85e-01 98.0% 90.8%
3zpeA00 2.60.90.50 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.60 51.0 3.80e-01 100.0% 55.8%
5ccbA01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.60 46.0 4.18e-01 88.0% 86.1%
3fmaA00 3.30.1490.40 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain 0.59 43.0 3.76e-01 84.0% 50.6%
1hxmB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 48.0 3.73e-01 100.0% 71.2%
3pm9A02 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.56 48.0 3.70e-01 100.0% 81.1%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 47.0 3.85e-01 96.0% 72.9%
3p42A03 3.10.560.10 Alpha Beta › Roll › Outer membrane lipoprotein wza fold like › Outer membrane lipoprotein wza domain like 0.56 49.0 4.35e-01 100.0% 95.9%
3f1sB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 41.0 3.50e-01 84.0% 46.2%
3bcwA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 49.0 3.84e-01 100.0% 47.1%
1yn3A00 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.56 47.0 3.90e-01 100.0% 92.9%
6vtmB00 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.56 48.0 3.96e-01 100.0% 93.8%
1fo0B00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 48.0 3.76e-01 100.0% 74.1%
5owvD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 42.0 2.84e-01 88.0% 29.3%
8ci9C01 2.60.120.330 Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.55 47.0 2.95e-01 100.0% 19.8%
5z06A01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.55 44.0 3.07e-01 92.0% 98.8%
1a1rA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 46.0 4.00e-01 100.0% 60.0%
5e99H01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 46.0 3.27e-01 100.0% 52.6%
7aj6H01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 46.0 3.58e-01 100.0% 75.6%
1o75A04 2.60.40.1270 Mainly Beta › Sandwich › Immunoglobulin-like › Penicillin-binding protein Tp47, domain D 0.54 43.0 3.83e-01 96.0% 74.4%
4ydjA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 45.0 3.44e-01 100.0% 69.6%
4ofyD01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 46.0 3.73e-01 100.0% 80.6%
3nkgA00 2.60.120.790 Mainly Beta › Sandwich › Jelly Rolls › 0.54 45.0 3.23e-01 100.0% 96.5%
2jwpA00 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.54 44.0 3.20e-01 100.0% 56.9%
1tvdA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 45.0 3.58e-01 100.0% 74.1%
4kncA02 2.60.120.1380 Mainly Beta › Sandwich › Jelly Rolls › C-terminal carbohydrate-binding module 0.54 45.0 3.56e-01 100.0% 93.2%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.54 46.0 3.53e-01 100.0% 77.9%
7y8sB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 44.0 3.81e-01 96.0% 73.8%
4l1dC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 44.0 3.57e-01 100.0% 78.0%
1a21A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 44.0 3.68e-01 100.0% 70.4%
2dl9A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 45.0 3.80e-01 98.0% 77.5%
5eb9A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 43.0 3.50e-01 100.0% 81.2%
1xzwA01 2.60.40.380 Mainly Beta › Sandwich › Immunoglobulin-like › Purple acid phosphatase-like, N-terminal 0.53 43.0 3.53e-01 94.0% 77.6%
4kx7A03 2.60.40.1910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 43.0 3.77e-01 98.0% 89.3%
6m3aA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 42.0 3.93e-01 96.0% 78.8%
4h8wC02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 44.0 3.87e-01 94.0% 82.7%
3ffjA04 2.60.40.4040 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 43.0 3.36e-01 100.0% 44.1%
2qhlD00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 41.0 3.43e-01 100.0% 82.6%
2d93A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 43.0 3.29e-01 100.0% 41.0%
4jfhE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 43.0 3.42e-01 100.0% 72.2%
3f95B00 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.52 43.0 3.08e-01 100.0% 91.9%
5d2lE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 43.0 3.47e-01 100.0% 75.9%
1ok0A00 2.60.40.20 Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-amylase inhibitor 0.51 43.0 3.86e-01 100.0% 89.2%
1p8jA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 40.0 3.17e-01 100.0% 91.7%
2id4A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 40.0 3.10e-01 100.0% 91.3%
2vdrB02 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.50 43.0 3.11e-01 100.0% 34.6%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5032461 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 62.0 5.75e-01 96.0% 98.5%
145704 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.72 57.0 5.53e-01 90.0% 89.7%
5008350 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.67 56.0 4.94e-01 100.0% 82.5%
3282775 284.1.1.9 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like › TrmI-like_N 0.64 49.0 4.59e-01 88.0% 93.8%
4939562 284.1.1.9 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like › TrmI-like_N 0.63 49.0 4.55e-01 88.0% 93.8%
3972307 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.62 51.0 4.90e-01 94.0% 86.7%
167127 284.1.1.9 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like › TrmI-like_N 0.61 45.0 4.36e-01 80.0% 100.0%
5047456 284.1.1.9 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like › TrmI-like_N 0.61 46.0 4.37e-01 84.0% 98.3%
3251299 10.32.1.18 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C 0.59 49.0 3.65e-01 100.0% 90.9%
2089783 1167.1.1.0 ↗ 0.59 40.0 3.62e-01 96.0% 48.7%
3910988 10.2.1.0 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.59 50.0 3.43e-01 100.0% 42.1%
3915780 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 49.0 4.13e-01 100.0% 82.2%
3936802 10.1.1.90 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PF29322 0.58 49.0 3.61e-01 100.0% 67.3%
3924183 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 45.0 4.00e-01 96.0% 67.5%
3915532 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.56 40.0 3.32e-01 80.0% 41.1%
3222026 10.4.1.9 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 0.56 47.0 3.70e-01 100.0% 79.1%
2797181 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.56 47.0 3.66e-01 100.0% 71.1%
3272261 11.1.1.29 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.55 45.0 3.82e-01 100.0% 83.2%
3284300 11.1.1.948 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF31173 0.55 45.0 3.62e-01 94.0% 75.2%
3929781 11.1.1.813 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › INTS4_C 0.54 45.0 3.30e-01 94.0% 62.1%
3514819 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.54 45.0 2.86e-01 100.0% 18.3%
3798429 10.7.1.0 ↗ beta sandwiches › jelly-roll › Hypothetical protein TM1070 › Hypothetical protein TM1070 0.54 46.0 3.81e-01 100.0% 64.2%
4520438 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.54 44.0 3.35e-01 94.0% 56.0%
3386406 10.32.1.89 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Ape1_N 0.53 44.0 3.28e-01 94.0% 83.7%
3611129 10.32.1.4 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.53 44.0 3.55e-01 100.0% 64.5%
3847908 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.53 44.0 3.54e-01 100.0% 74.3%
3958320 304.148.1.1 ↗ a+b two layers › Alpha-beta plaits › Uncharacterized protein Rv1825/MT1873 › Uncharacterized protein Rv1825/MT1873 › DUF881 0.53 41.0 3.28e-01 90.0% 63.5%
3901137 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.53 45.0 3.72e-01 100.0% 74.7%
5044223 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.52 46.0 3.69e-01 100.0% 82.0%
5044901 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.52 45.0 3.51e-01 100.0% 54.8%
3915086 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.52 44.0 3.68e-01 100.0% 76.8%
3903107 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 45.0 3.70e-01 100.0% 70.5%
3881485 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.52 45.0 3.52e-01 100.0% 70.0%
3529824 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.52 43.0 3.57e-01 98.0% 74.7%
3934782 633.23.1.3 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › L_HMGIC_fpl 0.51 37.0 2.59e-01 82.0% 72.1%
3236043 10.4.1.9 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 0.51 43.0 3.41e-01 100.0% 79.1%
3901139 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.51 43.0 3.52e-01 100.0% 78.0%
3340586 390.1.1.6 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 0.51 43.0 3.72e-01 100.0% 83.5%
3669499 390.1.1.6 ↗ few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_2 0.51 44.0 3.88e-01 100.0% 89.3%
5083000 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.51 41.0 3.32e-01 100.0% 97.4%
1163982 11.1.1.12 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin 0.50 43.0 3.41e-01 98.0% 63.2%