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LC667451.1__BDD79583.1__X__00064
Bact-VirLC667451.1__BDD79583.1__X__00064
Identity
- Accession:
- LC667451 ↗
- Kingdom:
- phage
Quality
87.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 224-421
Domain cluster:
rep: Salt_Pond_R2_restored_H2O_MG_scaffold_2_prodigal-single.1__X__X__00416__D402-569
D2
medium
residues 14-102
Domain cluster:
rep: MT939492.1__QNR51846.1__Xoosp14_155__00155__D10-91
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23824.2 best | DUF7194 | 68.4 | 8.20e-19 | 100.0% | 39.7% |
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 43.0 | 4.75e-01 | 100.0% | 70.4% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 41.0 | 4.87e-01 | 100.0% | 77.4% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 42.0 | 4.63e-01 | 100.0% | 69.4% |
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.72 | 36.0 | 4.73e-01 | 100.0% | 89.6% |
| 1e0bA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.72 | 37.0 | 4.43e-01 | 94.4% | 73.8% |
| 1vq8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 37.0 | 3.93e-01 | 85.4% | 57.7% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 41.0 | 4.74e-01 | 100.0% | 82.3% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 39.0 | 4.83e-01 | 89.9% | 91.1% |
| 2ldmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 35.0 | 4.35e-01 | 100.0% | 83.0% |
| 1d1lA00 | 3.30.240.10 | Alpha Beta › 2-Layer Sandwich › CRO Repressor › CRO Repressor | 0.66 | 40.0 | 4.60e-01 | 70.8% | 88.5% |
| 3itwA02 | 3.30.720.110 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.65 | 29.0 | 3.57e-01 | 96.6% | 64.3% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 39.0 | 4.63e-01 | 100.0% | 91.7% |
| 2e5wA01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.64 | 36.0 | 4.39e-01 | 96.6% | 89.3% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.63 | 39.0 | 4.49e-01 | 100.0% | 87.3% |
| 2dl5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 39.0 | 4.13e-01 | 100.0% | 70.5% |
| 1mbyA00 | 2.40.50.930 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 27.0 | 2.93e-01 | 76.4% | 44.0% |
| 2v1rA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 40.0 | 4.48e-01 | 100.0% | 88.1% |
| 7tzoA01 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.60 | 39.0 | 3.07e-01 | 95.5% | 33.3% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 33.0 | 4.37e-01 | 98.9% | 100.0% |
| 2vknA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 37.0 | 4.12e-01 | 100.0% | 83.3% |
| 3r90A00 | 3.10.400.20 | Alpha Beta › Roll › Sulfate adenylyltransferase › | 0.58 | 45.0 | 3.60e-01 | 84.3% | 96.8% |
| 3fssA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 36.0 | 3.68e-01 | 97.8% | 66.3% |
| 5umsA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 38.0 | 3.64e-01 | 96.6% | 59.8% |
| 4f98A00 | 2.30.140.50 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Protein of unknown function DUF2790 | 0.56 | 30.0 | 3.56e-01 | 86.5% | 75.8% |
| 2b2cA01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.55 | 35.0 | 4.07e-01 | 97.8% | 90.6% |
| 1wznA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.55 | 31.0 | 3.73e-01 | 95.5% | 85.7% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.54 | 33.0 | 3.76e-01 | 96.6% | 82.1% |
| 3htnB00 | 3.30.1330.80 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 | 0.53 | 37.0 | 3.22e-01 | 100.0% | 46.8% |
| 2jlmA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 38.0 | 3.08e-01 | 77.5% | 78.0% |
| 4dsdA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.52 | 36.0 | 3.25e-01 | 74.2% | 51.6% |
| 2yrlA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 35.0 | 3.62e-01 | 95.5% | 77.1% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4605602 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 45.0 | 5.25e-01 | 100.0% | 73.8% |
| 3933293 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.83 | 39.0 | 4.83e-01 | 86.5% | 70.7% |
| 4271974 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.79 | 43.0 | 5.00e-01 | 100.0% | 75.0% |
| 4241924 | 4.1.1.93 ↗ | beta barrels › SH3 › SH3 › SH3 › 40S_S4_C | 0.77 | 43.0 | 4.37e-01 | 100.0% | 55.6% |
| 4071917 | 4.1.1.111 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_RapA | 0.76 | 39.0 | 5.00e-01 | 100.0% | 88.0% |
| 2675820 | 4.1.1.93 ↗ | beta barrels › SH3 › SH3 › SH3 › 40S_S4_C | 0.75 | 42.0 | 4.25e-01 | 100.0% | 54.9% |
| 3741680 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 41.0 | 5.02e-01 | 100.0% | 87.3% |
| 4284709 | 4.1.1.111 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_RapA | 0.74 | 39.0 | 4.86e-01 | 100.0% | 83.6% |
| 3703749 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 41.0 | 4.68e-01 | 100.0% | 73.8% |
| 5073368 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 44.0 | 4.90e-01 | 100.0% | 75.7% |
| 3941152 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.73 | 38.0 | 4.40e-01 | 91.0% | 69.2% |
| 3687350 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 41.0 | 5.01e-01 | 100.0% | 89.1% |
| 3790904 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.71 | 35.0 | 4.16e-01 | 84.3% | 70.0% |
| 4931302 | 802.1.1.0 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 | 0.70 | 31.0 | 4.10e-01 | 76.4% | 74.0% |
| 3591224 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 39.0 | 4.90e-01 | 100.0% | 98.0% |
| 3396897 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.70 | 44.0 | 5.09e-01 | 100.0% | 90.5% |
| 3886492 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.69 | 43.0 | 4.69e-01 | 100.0% | 74.7% |
| 3189510 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.68 | 37.0 | 4.35e-01 | 95.5% | 78.3% |
| 4505316 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 39.0 | 4.63e-01 | 100.0% | 86.7% |
| 3741020 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 37.0 | 4.10e-01 | 100.0% | 68.6% |
| 3485745 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.65 | 40.0 | 4.74e-01 | 100.0% | 91.7% |
| 3907870 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.65 | 39.0 | 4.14e-01 | 100.0% | 68.4% |
| 4003181 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.64 | 41.0 | 4.84e-01 | 100.0% | 96.7% |
| 3701345 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 45.0 | 4.70e-01 | 100.0% | 85.0% |
| 4031199 | 4.1.1.86 ↗ | beta barrels › SH3 › SH3 › SH3 › GW | 0.61 | 42.0 | 4.47e-01 | 100.0% | 81.2% |
| 162525 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.60 | 37.0 | 3.55e-01 | 100.0% | 52.9% |
| 4311691 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.59 | 36.0 | 3.10e-01 | 92.1% | 40.7% |
| 3991065 | 4.1.1.334 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 | 0.58 | 42.0 | 4.46e-01 | 100.0% | 86.3% |
| 3900733 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.56 | 36.0 | 3.98e-01 | 100.0% | 82.9% |
| 3246255 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.56 | 35.0 | 3.88e-01 | 100.0% | 80.0% |
| 3341969 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.56 | 49.0 | 4.48e-01 | 94.4% | 98.3% |
| 3679362 | 4.1.1.351 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_ISE2 | 0.56 | 45.0 | 4.61e-01 | 100.0% | 92.9% |
| 4114145 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 32.0 | 2.88e-01 | 91.0% | 39.2% |
| 3498145 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.54 | 35.0 | 3.96e-01 | 100.0% | 92.2% |
| 3395625 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.51 | 44.0 | 3.54e-01 | 100.0% | 55.9% |
| 2464247 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.51 | 26.0 | 2.96e-01 | 91.0% | 62.1% |
| 3441293 | 4111.1.1.2 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC | 0.50 | 42.0 | 3.64e-01 | 100.0% | 58.6% |