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LC667451.1__BDD79640.1__X__00121

Bact-Vir

LC667451.1__BDD79640.1__X__00121

Identity

Accession:
LC667451 ↗
Kingdom:
phage

Quality

84.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Burkholderia_phage_FLC9

TaxID: 2906467

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-29_90-160
PDB
Domain cluster: rep: MH588545.1__AXQ68854.1__CcrPW_gp315__00315__D2-24_225-309
D2 high residues 32-84
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jiiA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.70 61.0 4.11e-01 100.0% 88.0%
2pziA01 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.69 60.0 4.17e-01 100.0% 81.9%
1biqA00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.59 51.0 3.13e-01 100.0% 17.4%
3r4iA02 6.10.140.960 Special › Helix non-globular › Helix Hairpins › 0.59 41.0 3.94e-01 88.7% 65.0%
1oltA02 1.10.10.920 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.58 50.0 4.38e-01 100.0% 98.8%
4rfsS00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.55 47.0 3.31e-01 100.0% 52.9%
3gwiA00 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.53 43.0 3.20e-01 98.1% 98.8%
1ciaA00 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.53 46.0 3.09e-01 100.0% 31.9%
1pp0B00 3.40.198.10 Alpha Beta › 3-Layer(aba) Sandwich › Delta-endotoxin CytB › Delta-endotoxin CytB-like 0.52 43.0 2.96e-01 92.5% 48.5%
2x49A04 3.40.50.12790 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 0.52 40.0 3.21e-01 83.0% 51.5%
2j5bA02 1.10.240.10 Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase 0.51 39.0 3.03e-01 84.9% 60.3%
1obhA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.50 43.0 2.63e-01 92.5% 22.9%
3qitB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 43.0 2.76e-01 100.0% 29.0%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5050026 109.2.1.35 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Hepar_II_III_N 0.63 55.0 3.30e-01 100.0% 81.8%
3782408 109.4.1.308 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps39_1 0.60 52.0 3.41e-01 98.1% 50.2%
4222499 101.19.1.0 ↗ alpha arrays › HTH › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN 0.59 44.0 3.92e-01 90.6% 88.9%
3943611 601.27.1.2 ↗ alpha bundles › Four-helical up-and-down bundle › MW0975(SA0943)-like › MW0975(SA0943)-like › DUF3053 0.58 51.0 3.42e-01 100.0% 27.8%
3101396 146.1.1.0 ↗ alpha arrays › Di-copper centre-containing domain › Di-copper centre-containing domain › Di-copper centre-containing domain 0.57 47.0 3.05e-01 100.0% 31.8%
4954786 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.57 48.0 4.19e-01 98.1% 90.6%
4361463 101.19.1.1 ↗ alpha arrays › HTH › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › C-terminal subdomain in oxygen-independent coproporphyrinogen III oxidase HemN › HemN_C 0.57 48.0 4.01e-01 100.0% 84.0%
4984244 205.1.1.0 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.55 31.0 2.95e-01 94.3% 41.5%
1240484 2002.1.1.111 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.54 45.0 2.82e-01 98.1% 15.6%
4067008 3236.2.1.8 ↗ alpha complex topology › Cation-proton antiporter › Sodium-dependent citrate symporter › Sodium-dependent citrate symporter › Asp-Al_Ex 0.54 46.0 2.81e-01 100.0% 70.1%
4512738 3236.1.1.16 ↗ alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Asp-Al_Ex 0.54 46.0 2.79e-01 100.0% 70.9%
3602002 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.54 47.0 2.83e-01 98.1% 14.1%
3698130 216.1.1.14 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › Med1 0.53 41.0 3.33e-01 88.7% 42.9%
3272724 2002.1.1.111 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.53 45.0 2.74e-01 100.0% 15.2%
7045 858.1.1.1 ↗ a+b three layers › CytB endotoxin-like (Pfam 01338) › CytB endotoxin-like (Pfam 01338) › CytB endotoxin-like (Pfam 01338) › Bac_thur_toxin 0.53 43.0 2.98e-01 92.5% 47.6%
3332131 5081.1.1.1 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.52 46.0 3.21e-01 100.0% 66.1%
3928877 101.1.15.1 ↗ alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.52 44.0 3.66e-01 92.5% 56.7%
5046321 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.52 32.0 2.19e-01 94.3% 14.4%
5040538 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 42.0 3.62e-01 90.6% 60.7%