Back to structures

LC667451.1__BDD79798.1__X__00279

Bact-Vir

LC667451.1__BDD79798.1__X__00279

Identity

Accession:
LC667451 ↗
Kingdom:
phage

Quality

82.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-110
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07866.18 best DUF1653 34.7 2.60e-08 61.4% 53.2%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2v14A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.57 45.0 4.11e-01 84.2% 84.3%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.56 38.0 4.34e-01 71.3% 100.0%
1vw4M01 2.30.30.790 Mainly Beta › Roll › SH3 type barrels. › 0.56 38.0 3.53e-01 70.3% 71.2%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 40.0 3.86e-01 82.2% 84.5%
2lexA00 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.50 31.0 3.76e-01 73.3% 100.0%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4077893 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 45.0 2.81e-01 74.3% 91.7%
3927894 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.59 46.0 4.24e-01 84.2% 78.5%
26065 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.56 38.0 3.77e-01 70.3% 67.0%
3623084 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 39.0 3.67e-01 73.3% 94.4%
4641867 277.1.1.0 a+b two layers › PX domain › PX domain › PX domain 0.55 48.0 4.18e-01 98.0% 78.1%
3706903 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.53 41.0 3.62e-01 84.2% 83.0%
3864474 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.53 41.0 3.50e-01 83.2% 94.5%
4427477 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 38.0 3.96e-01 76.2% 94.7%
3798524 277.1.1.0 a+b two layers › PX domain › PX domain › PX domain 0.52 41.0 3.92e-01 83.2% 93.9%
4486857 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.52 39.0 3.57e-01 80.2% 72.6%
3925426 220.1.1.176 beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7778 0.51 38.0 3.47e-01 80.2% 94.3%