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LC667451.1__BDD79805.1__X__00286

Bact-Vir

LC667451.1__BDD79805.1__X__00286

Identity

Accession:
LC667451 ↗
Kingdom:
phage

Quality

62.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Burkholderia_phage_FLC9

TaxID: 2906467

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 273-329
PDB
D2 high residues 481-544
PDB
D3 medium residues 7-71_110-146_170-195
PDB
Domain cluster: rep: MF063068.1__ARV77410.1__NOXIFER_245__00241__D1-78_114-149
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3e57A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.85 81.0 7.02e-01 98.4% 75.0%
3cddB03 3.30.1920.10 Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Baseplate protein-like domains - 2 layer sandwich fold 0.58 23.0 3.29e-01 76.6% 78.0%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
169086 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.85 81.0 7.02e-01 98.4% 75.0%
4441844 221.4.1.0 ↗ a+b two layers › beta-Grasp › Nudix › Nudix 0.84 79.0 6.62e-01 98.4% 77.0%
4031114 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.83 78.0 6.62e-01 98.4% 79.5%
5057871 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.82 77.0 6.44e-01 98.4% 75.0%
5029983 221.4.1.0 ↗ a+b two layers › beta-Grasp › Nudix › Nudix 0.81 77.0 6.41e-01 98.4% 75.0%
5039474 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.59 51.0 4.55e-01 100.0% 65.6%
3635926 304.7.1.0 ↗ a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.51 24.0 3.13e-01 97.7% 83.1%
D4 medium residues 72-109_147-169_196-242
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3qsjA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.67 61.0 4.78e-01 100.0% 89.2%
3dupB01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.65 60.0 5.05e-01 100.0% 77.8%
3n77A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.59 54.0 4.94e-01 99.1% 93.6%
3gz8C01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.56 52.0 4.78e-01 100.0% 95.6%
2o1cA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.56 51.0 4.63e-01 100.0% 91.2%
4j7hA02 3.90.79.40 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › EvaA sugar 2,3-dehydratase subunit 0.54 50.0 4.29e-01 100.0% 78.2%
3eesA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.54 49.0 4.60e-01 100.0% 93.1%
2kz6A01 6.10.140.1310 Special › Helix non-globular › Helix Hairpins › 0.53 23.0 2.65e-01 88.9% 49.4%
3gwyB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.53 49.0 4.53e-01 100.0% 91.7%
1v8wA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.53 48.0 4.28e-01 100.0% 79.9%
2b0vA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.52 46.0 4.20e-01 100.0% 85.8%
6u7tA03 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.51 46.0 4.49e-01 100.0% 94.2%
1vc9A01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.50 46.0 4.43e-01 100.0% 95.1%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4441844 221.4.1.0 ↗ a+b two layers › beta-Grasp › Nudix › Nudix 0.66 61.0 4.85e-01 97.2% 69.5%
4031114 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.63 56.0 4.55e-01 95.4% 68.7%
5058171 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.59 55.0 5.21e-01 100.0% 94.6%
5001210 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.59 55.0 4.90e-01 100.0% 84.7%
4948211 221.4.1.0 ↗ a+b two layers › beta-Grasp › Nudix › Nudix 0.58 54.0 4.76e-01 100.0% 83.3%
4937802 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.57 53.0 5.01e-01 100.0% 93.1%
4954158 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.57 53.0 4.99e-01 100.0% 96.1%
3284361 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.57 52.0 4.67e-01 100.0% 82.7%
4934398 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.56 52.0 4.78e-01 100.0% 94.1%
3165564 221.4.1.9 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.56 52.0 4.77e-01 100.0% 95.6%
5081944 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.56 52.0 4.78e-01 100.0% 92.6%
3623075 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.51 46.0 3.93e-01 100.0% 73.1%
6243 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.50 46.0 4.36e-01 100.0% 92.1%
D5 medium residues 354-377_392-421
PDB
D6 medium residues 567-633
PDB