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LC667451.1__BDD79835.1__X__00316

Bact-Vir

LC667451.1__BDD79835.1__X__00316

Identity

Accession:
LC667451 ↗
Kingdom:
phage

Quality

58.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Burkholderia_phage_FLC9

TaxID: 2906467

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 70-201
PDB
D2 high residues 471-558
PDB
D3 medium residues 1-69
PDB
D4 medium residues 234-273_290-324_375-399_422-444
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2r1bA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.73 57.0 4.80e-01 81.3% 93.4%
3asiA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.71 56.0 4.89e-01 82.1% 93.3%
1qu0C00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.71 57.0 4.92e-01 83.7% 93.4%
2r16A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.69 56.0 4.89e-01 83.7% 93.7%
2zewB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.65 52.0 4.89e-01 83.7% 93.9%
2q1fA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.63 50.0 4.53e-01 84.6% 82.0%
5x7qA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 48.0 4.77e-01 83.7% 98.4%
3zm8A01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 46.0 4.56e-01 83.7% 92.9%
5dzeA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 52.0 4.43e-01 98.4% 95.5%
3wnoA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 45.0 4.45e-01 84.6% 95.4%
2lnvA01 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.56 30.0 3.65e-01 100.0% 86.8%
5f7uA06 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 44.0 4.40e-01 83.7% 96.8%
4xvhA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 41.0 4.41e-01 84.6% 94.4%
3skvA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 45.0 4.19e-01 93.5% 89.6%
2w1sA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 41.0 3.99e-01 84.6% 99.3%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3968310 10.32.1.8 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 0.61 48.0 4.57e-01 83.7% 97.9%
3521772 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.61 51.0 4.24e-01 89.4% 88.6%
5033796 10.1.1.46 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › InhA-like_MAM 0.58 51.0 4.94e-01 95.9% 99.3%
4021603 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.58 45.0 4.47e-01 83.7% 95.4%
4575485 10.32.1.51 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_35 0.57 45.0 4.51e-01 83.7% 95.2%
3238005 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.56 44.0 3.97e-01 84.6% 74.9%
3927701 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 43.0 4.02e-01 84.6% 85.3%
1158363 10.32.1.171 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › SsfX3_N 0.52 45.0 4.20e-01 93.5% 90.8%
D5 medium residues 274-289_325-374_400-421
PDB
Domain cluster: rep: LC667451.1__BDD79842.1__X__00323__D342-448
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13385.14 best Laminin_G_3 35.8 1.20e-08 95.5% 41.1%