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LC667451.1__BDD79836.1__X__00317
Bact-VirLC667451.1__BDD79836.1__X__00317
Identity
- Accession:
- LC667451 ↗
- Kingdom:
- phage
Quality
75.9
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-107
Domain cluster:
rep: MW879341.1__QXO10940.1__pEaSNUABM54_00114__00114__D183-275
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a2pA00 | 3.10.450.30 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Microbial ribonucleases | 0.60 | 35.0 | 3.30e-01 | 89.1% | 47.2% |
| 1tj6A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 39.0 | 3.62e-01 | 90.2% | 54.8% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 33.0 | 3.44e-01 | 100.0% | 64.2% |
| 1u7iA01 | 3.30.720.100 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.55 | 32.0 | 3.70e-01 | 100.0% | 80.3% |
| 1nw1A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 47.0 | 4.68e-01 | 98.9% | 93.8% |
| 2o6yA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.53 | 42.0 | 3.35e-01 | 88.0% | 55.4% |
| 1xszA03 | 3.30.310.140 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › sec7 domains | 0.53 | 39.0 | 3.31e-01 | 100.0% | 46.5% |
| 6p3qA02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.52 | 45.0 | 3.84e-01 | 98.9% | 76.6% |
| 4f0qA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.51 | 44.0 | 3.57e-01 | 100.0% | 68.2% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4549698 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.64 | 42.0 | 4.17e-01 | 96.7% | 64.2% |
| 4937130 | 375.1.1.7 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C | 0.62 | 33.0 | 3.84e-01 | 88.0% | 72.3% |
| 3931055 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.61 | 42.0 | 4.63e-01 | 100.0% | 88.0% |
| 3539717 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 35.0 | 4.06e-01 | 87.0% | 89.2% |
| 3600113 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.56 | 48.0 | 3.64e-01 | 100.0% | 39.1% |
| 3937157 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.54 | 31.0 | 3.47e-01 | 82.6% | 72.9% |
| 3427044 | 4.1.1.36 ↗ | beta barrels › SH3 › SH3 › SH3 › FeThRed_A | 0.53 | 41.0 | 4.16e-01 | 92.4% | 85.6% |
| 4957302 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 39.0 | 3.99e-01 | 96.7% | 82.2% |
| 5029179 | 5090.1.1.0 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains | 0.52 | 36.0 | 3.46e-01 | 94.6% | 61.8% |
| 3591210 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 42.0 | 4.29e-01 | 90.2% | 100.0% |