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LC727697.1__BDR25561.1__RVBP16_0010__00001

Bact-Vir

LC727697.1__BDR25561.1__RVBP16_0010__00001

Identity

Accession:
LC727697 ↗
Kingdom:
phage

Quality

75.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Arenbergviridae› Wroclawvirus› Pseudomonas_phage_sp._30-2

TaxID: 2972142

Cluster

View cluster (10 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-93
PDB
Domain cluster: rep: unknown_similar_to_AMEV224__YP_008003762__Mythimna_separata_entomopoxvirus_L__1293572__D3-107
CATH (71)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3cueB00 3.30.1380.20 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 0.76 70.0 5.66e-01 100.0% 56.9%
4i6yA02 3.30.70.420 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain 0.74 62.0 5.81e-01 90.1% 85.5%
2w7vA00 3.30.1360.100 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM 0.74 57.0 5.99e-01 100.0% 91.5%
2nyiA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.74 53.0 5.55e-01 85.7% 84.0%
2lqjA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.73 55.0 5.50e-01 94.5% 77.7%
1qf6A02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.72 64.0 6.12e-01 100.0% 84.0%
2rrnA01 3.30.70.2040 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 52.0 5.42e-01 91.2% 85.5%
1zpvA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.70 52.0 5.36e-01 91.2% 84.7%
1q2lA02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.70 54.0 4.03e-01 83.5% 66.7%
3p96A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.70 50.0 5.23e-01 83.5% 83.3%
3bypA00 3.30.70.1350 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cation efflux protein, cytoplasmic domain 0.69 54.0 5.68e-01 90.1% 93.9%
3hn3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 43.0 4.16e-01 84.6% 54.8%
1ygyA04 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.69 48.0 5.14e-01 85.7% 86.8%
3w5xA00 3.30.70.1350 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cation efflux protein, cytoplasmic domain 0.68 54.0 5.69e-01 92.3% 97.5%
1ib8A01 3.30.300.70 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › RimP-like superfamily, N-terminal 0.68 56.0 5.85e-01 94.5% 97.6%
2v94B00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.68 51.0 5.14e-01 83.5% 77.4%
1bdfA01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.68 52.0 4.95e-01 83.5% 69.8%
6dw1A00 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.67 60.0 4.58e-01 100.0% 79.5%
3uebF00 3.30.300.100 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like 0.67 46.0 4.49e-01 71.4% 79.0%
3of6E00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 49.0 4.73e-01 83.5% 68.3%
6d6tA01 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.66 59.0 4.50e-01 100.0% 78.6%
2qmwA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.66 46.0 4.89e-01 82.4% 85.7%
1ekrA00 3.30.70.640 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Molybdopterin cofactor biosynthesis C (MoaC) domain 0.65 55.0 4.77e-01 93.4% 76.9%
1v4pC01 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.65 57.0 5.43e-01 100.0% 92.6%
8hbfB01 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.65 58.0 4.64e-01 100.0% 50.3%
2xzmP00 3.30.70.3370 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 47.0 4.09e-01 84.6% 49.3%
3racA00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.64 57.0 3.86e-01 100.0% 90.9%
1uw4A00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.63 50.0 5.07e-01 92.3% 87.9%
6lgqC01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.62 56.0 4.95e-01 100.0% 96.9%
2nyiA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 47.0 4.73e-01 83.5% 82.2%
4gt8A00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.62 56.0 4.90e-01 100.0% 91.0%
3d4eA02 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.62 34.0 3.63e-01 95.6% 61.5%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 45.0 4.71e-01 91.2% 86.4%
5optY00 3.30.70.3370 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 47.0 4.30e-01 84.6% 61.8%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 40.0 4.42e-01 81.3% 85.9%
2c5dC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 45.0 4.32e-01 86.8% 68.3%
1mc0A01 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.60 44.0 3.76e-01 79.1% 70.3%
2x8kA01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.59 50.0 4.84e-01 95.6% 86.7%
4bsjA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 46.0 4.19e-01 83.5% 72.4%
2pgcA02 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 46.0 4.43e-01 85.7% 76.4%
5a2fA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 44.0 4.17e-01 82.4% 66.1%
4o38A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 46.0 4.60e-01 95.6% 83.3%
4c57B00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.58 47.0 3.30e-01 98.9% 26.6%
3en9A03 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 43.0 4.71e-01 81.3% 98.6%
2lnjA00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.57 51.0 4.18e-01 100.0% 66.5%
3o3uN03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 43.0 4.08e-01 82.4% 66.7%
2od6C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 45.0 4.34e-01 87.9% 82.2%
2psoB02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 49.0 3.93e-01 95.6% 79.2%
5ig0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 43.0 3.86e-01 83.5% 96.2%
4f0qD01 2.30.280.20 Mainly Beta › Roll › PUA domain-like › 0.55 47.0 3.55e-01 100.0% 72.5%
3a27A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 50.0 3.73e-01 98.9% 42.0%
1v2bB00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.55 49.0 4.16e-01 100.0% 70.2%
3nrfA00 2.60.40.4110 Mainly Beta › Sandwich › Immunoglobulin-like › Protein of unknown function DUF4354 0.55 43.0 4.14e-01 84.6% 80.4%
4g2uA00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.55 44.0 3.43e-01 89.0% 61.9%
2pfcA00 3.10.129.30 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Rv0098, thioesterase-like hot dog domain 0.55 47.0 3.99e-01 100.0% 96.9%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.54 27.0 3.27e-01 94.5% 72.9%
2pziB02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 42.0 3.68e-01 86.8% 82.8%
3hn5A02 2.60.40.2060 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 41.0 3.87e-01 84.6% 67.0%
4atnA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 47.0 3.81e-01 100.0% 76.4%
3l5zA01 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.52 46.0 4.06e-01 98.9% 93.4%
4qnyA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 42.0 3.96e-01 100.0% 70.6%
1mjfB02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 47.0 3.55e-01 100.0% 70.5%
4hasA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 36.0 3.49e-01 72.5% 67.3%
1f49A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 45.0 3.25e-01 100.0% 91.0%
8ediA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 36.0 3.55e-01 82.4% 65.4%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.52 31.0 2.96e-01 98.9% 50.9%
1tu1A00 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.51 45.0 3.91e-01 100.0% 61.8%
2nraC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 42.0 4.08e-01 92.3% 94.1%
2e3nA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 42.0 3.25e-01 94.5% 70.1%
3edpA02 3.40.1410.10 Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like 0.50 45.0 3.84e-01 98.9% 86.3%
2joxA00 2.60.40.4240 Mainly Beta › Sandwich › Immunoglobulin-like › Transcription activator, Churchill 0.50 33.0 3.25e-01 100.0% 59.4%
ECOD (87)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4517239 327.4.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N 0.77 61.0 6.08e-01 85.7% 97.9%
4067759 327.4.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N 0.77 62.0 6.33e-01 86.8% 96.7%
4291980 327.4.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N 0.76 60.0 6.09e-01 84.6% 93.3%
4954449 310.3.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.75 65.0 6.36e-01 100.0% 86.9%
4432583 327.4.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N 0.75 61.0 6.29e-01 87.9% 94.1%
5014292 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.75 40.0 5.19e-01 95.6% 96.0%
4957232 310.3.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.75 68.0 6.63e-01 100.0% 95.0%
2553760 304.12.1.1 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.75 64.0 6.08e-01 92.3% 81.1%
4473930 327.4.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N 0.75 58.0 6.12e-01 83.5% 97.5%
3961727 327.4.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N 0.74 59.0 6.07e-01 84.6% 94.1%
4282602 327.4.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N 0.74 60.0 6.06e-01 86.8% 96.7%
3685834 306.3.1.0 ↗ a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like 0.74 58.0 5.36e-01 83.5% 72.2%
4654301 327.4.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N 0.74 59.0 6.13e-01 85.7% 100.0%
3573614 310.3.1.18 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PAP_PilO 0.74 57.0 5.85e-01 100.0% 87.1%
5055225 304.12.1.0 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 0.73 50.0 5.33e-01 70.3% 100.0%
4294293 327.7.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer 0.73 54.0 5.89e-01 92.3% 96.0%
148700 304.12.1.2 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C 0.73 55.0 5.50e-01 94.5% 77.7%
4594018 327.4.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N 0.73 58.0 6.04e-01 86.8% 94.1%
4928628 327.7.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer 0.72 56.0 5.86e-01 93.4% 90.5%
3589403 304.124.1.0 ↗ a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like 0.72 65.0 5.96e-01 100.0% 95.0%
3802659 304.8.1.66 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF7049 0.72 55.0 5.29e-01 81.3% 73.3%
5081027 327.7.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer 0.72 56.0 5.91e-01 92.3% 95.0%
5022436 327.7.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer 0.71 57.0 5.98e-01 92.3% 95.2%
3307398 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.71 50.0 4.69e-01 72.5% 64.5%
4330352 327.4.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N 0.71 57.0 5.90e-01 86.8% 94.1%
4579088 327.4.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N 0.71 60.0 6.07e-01 92.3% 95.6%
4607326 305.1.1.1 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.71 52.0 5.01e-01 81.3% 67.6%
4674830 327.4.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N 0.71 55.0 5.77e-01 93.4% 95.0%
3306024 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.70 48.0 4.53e-01 71.4% 60.0%
4196274 305.1.1.1 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.69 53.0 4.91e-01 81.3% 67.0%
3965259 243.3.1.16 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY_2 0.69 46.0 5.05e-01 83.5% 83.8%
4049992 327.4.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N 0.69 53.0 5.31e-01 84.6% 84.2%
4069430 327.4.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain › RimP_N 0.68 59.0 5.56e-01 94.5% 90.0%
4342449 305.1.1.1 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.68 52.0 4.75e-01 81.3% 65.0%
4161001 305.1.1.0 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase 0.68 52.0 5.18e-01 85.7% 78.9%
5018154 873.1.1.19 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › MetOD1 0.68 60.0 5.31e-01 98.9% 68.5%
3731819 327.7.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.68 58.0 5.59e-01 94.5% 91.4%
4296415 304.109.1.4 ↗ a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_S24e 0.68 52.0 5.01e-01 84.6% 73.0%
4961279 310.3.1.27 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PF26272 0.68 55.0 5.56e-01 100.0% 88.9%
4057397 305.1.1.1 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.67 53.0 4.88e-01 83.5% 69.6%
3449841 310.3.1.14 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › DUF7049 0.66 51.0 5.13e-01 83.5% 94.7%
3898743 11.12.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.66 59.0 4.51e-01 100.0% 77.7%
1916704 872.12.1.1 ↗ a+b two layers › Dodecin subunit-like › Francisella virulence factor › Francisella virulence factor › PF30739 0.66 51.0 4.95e-01 84.6% 95.2%
4997740 331.9.1.0 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.65 46.0 3.98e-01 72.5% 72.9%
4169524 305.1.1.1 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.65 50.0 4.70e-01 83.5% 67.0%
4989671 327.7.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer 0.64 51.0 5.24e-01 89.0% 92.9%
3663259 881.1.1.1 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.64 48.0 4.23e-01 80.2% 83.0%
3378122 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.64 57.0 5.05e-01 98.9% 75.4%
4541115 305.1.1.1 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.64 47.0 4.29e-01 81.3% 57.6%
3495445 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.64 52.0 3.41e-01 96.7% 21.0%
3273660 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.64 47.0 3.74e-01 79.1% 56.8%
4946121 304.102.1.2 ↗ a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD 0.63 53.0 4.08e-01 93.4% 93.0%
5013821 872.1.1.0 ↗ a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like 0.63 47.0 4.30e-01 79.1% 90.8%
5082575 304.109.1.0 ↗ a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e 0.62 48.0 5.06e-01 84.6% 96.2%
3815555 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.61 55.0 4.85e-01 100.0% 82.2%
3304346 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.61 34.0 3.81e-01 93.4% 70.0%
3730752 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.61 47.0 4.58e-01 85.7% 80.0%
3961625 225.1.1.3 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.61 54.0 4.79e-01 100.0% 90.4%
3680344 304.8.1.9 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 0.61 54.0 4.88e-01 100.0% 75.2%
3278331 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.60 45.0 3.95e-01 81.3% 100.0%
4940945 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.60 51.0 4.32e-01 97.8% 56.1%
3314422 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.60 33.0 3.73e-01 93.4% 70.0%
5040496 304.54.1.0 ↗ a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like 0.59 38.0 4.05e-01 83.5% 76.2%
3421851 304.8.1.2 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.59 53.0 4.75e-01 100.0% 81.6%
4649438 331.10.1.2 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › AdoMet_dc 0.58 52.0 3.76e-01 98.9% 67.5%
3744445 206.1.1.70 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.58 47.0 3.26e-01 100.0% 25.2%
3931530 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.58 42.0 3.87e-01 78.0% 59.3%
5068090 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.57 33.0 3.25e-01 100.0% 50.0%
5052597 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.57 45.0 3.93e-01 95.6% 55.7%
5047424 331.9.1.0 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.57 41.0 3.79e-01 81.3% 57.5%
4994093 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.56 47.0 3.96e-01 96.7% 53.5%
3829111 881.1.1.1 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP 0.56 49.0 3.80e-01 98.9% 65.7%
4012647 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.56 47.0 3.16e-01 95.6% 23.3%
3694611 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.56 45.0 3.10e-01 95.6% 22.5%
3194447 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.56 45.0 3.09e-01 95.6% 23.1%
5025112 4272.1.1.1 ↗ a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.55 35.0 3.23e-01 84.6% 45.6%
3552777 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.55 45.0 2.76e-01 98.9% 12.8%
3607007 306.5.1.0 ↗ a+b two layers › Glucose permease domain IIB-like › GTP cyclohydrolase I feedback regulatory protein, GFRP › GTP cyclohydrolase I feedback regulatory protein, GFRP 0.54 48.0 4.39e-01 100.0% 83.3%
5001386 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.54 34.0 3.59e-01 96.7% 69.4%
4973410 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.53 47.0 3.92e-01 98.9% 71.2%
3703566 306.10.1.0 ↗ a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 0.53 47.0 4.31e-01 100.0% 83.3%
3959344 872.3.1.1 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_1 0.52 45.0 4.26e-01 98.9% 93.0%
3228525 241.15.1.0 ↗ a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.52 43.0 4.07e-01 100.0% 75.5%
5014316 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.52 45.0 3.80e-01 98.9% 66.3%
4029293 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.52 44.0 3.98e-01 96.7% 75.8%
4338458 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.51 40.0 2.75e-01 94.5% 22.7%
4026343 328.1.1.0 ↗ a+b two layers › IF3-like › AlbA-like › AlbA-like 0.50 40.0 4.03e-01 100.0% 85.3%