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LC739539.1__BDU13769.1__X__00159
Bact-VirLC739539.1__BDU13769.1__X__00159
Identity
- Accession:
- LC739539 ↗
- Kingdom:
- phage
Quality
69.1
mean pLDDT
Taxonomy
TaxID: 2992786
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-76
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ckkA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 59.0 | 6.14e-01 | 90.3% | 98.2% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.70 | 59.0 | 4.57e-01 | 96.8% | 95.2% |
| 3goxA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 54.0 | 5.86e-01 | 87.1% | 100.0% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 57.0 | 5.92e-01 | 100.0% | 100.0% |
| 2ew0A00 | 3.40.1740.10 | Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like | 0.68 | 56.0 | 4.07e-01 | 91.9% | 81.1% |
| 6biqC01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.67 | 59.0 | 4.74e-01 | 100.0% | 52.1% |
| 2k5fA01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.66 | 59.0 | 5.32e-01 | 98.4% | 88.0% |
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.66 | 55.0 | 4.47e-01 | 100.0% | 52.7% |
| 3udcA02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 47.0 | 5.05e-01 | 91.9% | 94.0% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.65 | 55.0 | 5.56e-01 | 96.8% | 98.3% |
| 2k1gA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.64 | 55.0 | 4.36e-01 | 100.0% | 46.5% |
| 4fdyA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.62 | 54.0 | 4.25e-01 | 100.0% | 46.3% |
| 3npfA03 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.61 | 55.0 | 4.03e-01 | 100.0% | 45.3% |
| 1fx7B03 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.61 | 52.0 | 4.88e-01 | 100.0% | 98.8% |
| 2gs5A01 | 3.40.1740.10 | Alpha Beta › 3-Layer(aba) Sandwich › VC0467-like › VC0467-like | 0.60 | 50.0 | 3.69e-01 | 100.0% | 78.7% |
| 3tfmA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 46.0 | 3.92e-01 | 87.1% | 78.9% |
| 4hn7A00 | 2.40.50.650 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 44.0 | 4.00e-01 | 80.6% | 84.7% |
| 3e1sA04 | 2.30.30.940 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 48.0 | 4.74e-01 | 96.8% | 89.9% |
| 4by6C00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.58 | 41.0 | 3.03e-01 | 85.5% | 26.7% |
| 2m9uA00 | 2.30.30.850 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 44.0 | 4.03e-01 | 93.5% | 60.7% |
| 6iikB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.58 | 48.0 | 3.13e-01 | 100.0% | 35.6% |
| 1y0mA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 43.0 | 4.36e-01 | 82.3% | 95.1% |
| 4ml0B00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.57 | 40.0 | 3.61e-01 | 82.3% | 52.2% |
| 1ms5B02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 48.0 | 3.27e-01 | 100.0% | 74.2% |
| 4w1vA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 36.0 | 2.66e-01 | 71.0% | 25.3% |
| 4gzvA00 | 2.40.128.490 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14869 family, DUF4488 | 0.56 | 44.0 | 3.50e-01 | 88.7% | 86.3% |
| 3gqsB00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.55 | 44.0 | 3.84e-01 | 91.9% | 83.2% |
| 2xzmR01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 40.0 | 2.60e-01 | 82.3% | 21.5% |
| 8dc1A01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.55 | 41.0 | 2.74e-01 | 82.3% | 96.0% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.54 | 40.0 | 4.06e-01 | 83.9% | 84.7% |
| 3aqfB00 | 4.10.1240.10 | Few Secondary Structures › Irregular › Hormone receptor fold › GPCR, family 2, extracellular hormone receptor domain | 0.54 | 38.0 | 3.39e-01 | 82.3% | 49.5% |
| 2p9bA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.53 | 43.0 | 3.71e-01 | 91.9% | 88.2% |
| 4ccdA03 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.53 | 43.0 | 3.23e-01 | 100.0% | 87.0% |
| 5h1kA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 40.0 | 2.59e-01 | 87.1% | 31.3% |
| 1k1zA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 39.0 | 3.71e-01 | 85.5% | 85.9% |
| 4gouA02 | 2.30.29.200 | Mainly Beta › Roll › PH-domain like › | 0.51 | 39.0 | 3.06e-01 | 88.7% | 62.7% |
| 2jxbA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 38.0 | 3.54e-01 | 87.1% | 67.4% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3616007 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.79 | 65.0 | 6.90e-01 | 96.8% | 100.0% |
| 3414063 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.77 | 64.0 | 6.73e-01 | 91.9% | 100.0% |
| 3553983 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.76 | 66.0 | 6.70e-01 | 100.0% | 96.7% |
| 3554026 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.76 | 65.0 | 6.63e-01 | 96.8% | 96.7% |
| 3929373 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.75 | 66.0 | 6.75e-01 | 100.0% | 100.0% |
| 3937333 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 57.0 | 5.22e-01 | 87.1% | 66.3% |
| 3930366 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 59.0 | 6.04e-01 | 91.9% | 98.3% |
| 4210485 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.71 | 58.0 | 5.75e-01 | 93.5% | 86.2% |
| 3486495 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 56.0 | 3.98e-01 | 91.9% | 30.3% |
| 5039793 | 219.1.1.77 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF3335 | 0.70 | 61.0 | 4.27e-01 | 100.0% | 40.0% |
| 3448216 | 4.1.1.421 ↗ | beta barrels › SH3 › SH3 › SH3 › ARF_AD | 0.70 | 61.0 | 5.89e-01 | 98.4% | 98.6% |
| 4620685 | 4113.1.1.1 ↗ | beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 | 0.70 | 63.0 | 4.46e-01 | 100.0% | 80.0% |
| 3609256 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 62.0 | 5.59e-01 | 98.4% | 82.4% |
| 4319097 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 54.0 | 5.59e-01 | 95.2% | 91.4% |
| 3934192 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 56.0 | 5.76e-01 | 90.3% | 95.0% |
| 3482225 | 4.1.1.300 ↗ | beta barrels › SH3 › SH3 › SH3 › KN17_SH3, SH3_KIN17_C | 0.69 | 58.0 | 4.51e-01 | 93.5% | 43.8% |
| 3940362 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.69 | 59.0 | 4.01e-01 | 96.8% | 27.5% |
| 4639593 | 4113.1.1.1 ↗ | beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 | 0.68 | 58.0 | 4.13e-01 | 93.5% | 84.4% |
| 3854638 | 4.1.1.131 ↗ | beta barrels › SH3 › SH3 › SH3 › MLVIN_C | 0.68 | 55.0 | 4.70e-01 | 95.2% | 55.0% |
| 3640801 | 4.1.1.232 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Tf2-1 | 0.68 | 58.0 | 5.37e-01 | 96.8% | 83.7% |
| 3938908 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 57.0 | 5.50e-01 | 96.8% | 82.9% |
| 3640516 | 4.1.1.232 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Tf2-1 | 0.68 | 59.0 | 5.01e-01 | 96.8% | 66.0% |
| 3862537 | 4.1.1.131 ↗ | beta barrels › SH3 › SH3 › SH3 › MLVIN_C | 0.68 | 50.0 | 5.40e-01 | 88.7% | 100.0% |
| 4017814 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 61.0 | 4.89e-01 | 100.0% | 83.1% |
| 3928136 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 58.0 | 5.88e-01 | 98.4% | 100.0% |
| 3933539 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 58.0 | 5.81e-01 | 100.0% | 95.4% |
| 3927795 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 55.0 | 5.58e-01 | 91.9% | 98.3% |
| 3935101 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 56.0 | 5.60e-01 | 96.8% | 93.8% |
| 3796759 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.66 | 59.0 | 5.11e-01 | 100.0% | 72.6% |
| 3930643 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 54.0 | 5.49e-01 | 98.4% | 96.7% |
| 3963980 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.66 | 56.0 | 4.26e-01 | 100.0% | 40.6% |
| 3598285 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 58.0 | 5.62e-01 | 98.4% | 92.9% |
| 5072949 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.65 | 58.0 | 5.74e-01 | 98.4% | 100.0% |
| 1503651 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.65 | 57.0 | 5.24e-01 | 100.0% | 76.2% |
| 3703933 | 4.1.1.237 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 | 0.65 | 58.0 | 5.75e-01 | 98.4% | 98.5% |
| 4028731 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 58.0 | 5.73e-01 | 98.4% | 98.5% |
| 3514556 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 58.0 | 5.59e-01 | 100.0% | 88.6% |
| 3619619 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 56.0 | 5.41e-01 | 100.0% | 85.7% |
| 3270570 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.64 | 49.0 | 4.15e-01 | 88.7% | 75.7% |
| 5056599 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.63 | 52.0 | 4.12e-01 | 100.0% | 54.7% |
| 3400906 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.63 | 51.0 | 4.32e-01 | 90.3% | 80.0% |
| 3500448 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 52.0 | 5.13e-01 | 100.0% | 90.8% |
| 4582494 | 4113.1.1.1 ↗ | beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 | 0.62 | 52.0 | 3.85e-01 | 100.0% | 82.2% |
| 4451786 | 4113.1.1.1 ↗ | beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 | 0.62 | 50.0 | 3.67e-01 | 93.5% | 82.2% |
| 3277206 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 53.0 | 4.96e-01 | 100.0% | 80.8% |
| 3930311 | 220.1.1.176 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7778 | 0.60 | 48.0 | 3.94e-01 | 90.3% | 73.3% |
| 677 | 4113.1.1.1 ↗ | beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 | 0.60 | 50.0 | 3.67e-01 | 100.0% | 76.7% |
| 4044420 | 4113.1.1.1 ↗ | beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 | 0.59 | 47.0 | 3.52e-01 | 93.5% | 81.1% |
| 4517280 | 2.8.1.2 ↗ | beta barrels › OB-fold › mu transposases-C › mu transposases-C › Mu-transpos_C_2 | 0.58 | 41.0 | 4.03e-01 | 75.8% | 82.9% |
| 3291083 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.57 | 50.0 | 4.43e-01 | 100.0% | 92.2% |
| 4029544 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 43.0 | 3.42e-01 | 88.7% | 67.1% |
| 3950159 | 3708.1.1.1 ↗ | a+b three layers › ESX-1 secretion system protein eccB1 modular domains › ESX-1 secretion system protein eccB1 modular domains › ESX-1 secretion system protein eccB1 modular domains › T7SS_ESX1_EccB | 0.55 | 43.0 | 3.74e-01 | 85.5% | 72.6% |
| 3464481 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.54 | 46.0 | 2.93e-01 | 100.0% | 83.2% |
| 3582807 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 38.0 | 2.38e-01 | 79.0% | 32.8% |
| 3281774 | 9.1.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META | 0.52 | 40.0 | 3.54e-01 | 95.2% | 100.0% |
| 3620221 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 39.0 | 3.42e-01 | 90.3% | 68.2% |
| 3520119 | 5.1.4.48 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BBS1 | 0.50 | 41.0 | 2.56e-01 | 93.5% | 91.6% |