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LC765218.1__BEG72394.1__RVBP21_0220__00022
Bact-VirLC765218.1__BEG72394.1__RVBP21_0220__00022
Identity
- Accession:
- LC765218 ↗
- Kingdom:
- phage
Quality
90.4
mean pLDDT
Cluster
View cluster (47 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-65
Domain cluster:
rep: MF063068.1__ARV77298.1__NOXIFER_129__00129__D7-64
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fkcA01 | 3.40.1350.40 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.70 | 51.0 | 4.20e-01 | 100.0% | 42.7% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.64 | 47.0 | 4.87e-01 | 100.0% | 85.7% |
| 4da5A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.63 | 53.0 | 4.89e-01 | 100.0% | 74.7% |
| 1sr9A02 | 3.30.160.270 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Alpha-isopropylmalate synthase LeuA, regulatory domain | 0.63 | 47.0 | 3.46e-01 | 81.7% | 59.8% |
| 2r5vB02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.63 | 46.0 | 3.21e-01 | 100.0% | 24.1% |
| 2nlkA02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.62 | 47.0 | 3.13e-01 | 83.3% | 38.1% |
| 4id2A00 | 2.40.128.510 | Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 | 0.61 | 48.0 | 3.79e-01 | 100.0% | 39.7% |
| 3mcrA00 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.60 | 43.0 | 3.30e-01 | 80.0% | 61.0% |
| 1njkA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.59 | 43.0 | 3.35e-01 | 78.3% | 66.2% |
| 2qkdA03 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.58 | 40.0 | 4.22e-01 | 71.7% | 84.3% |
| 3r87A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.58 | 42.0 | 3.31e-01 | 78.3% | 65.9% |
| 8jx6A02 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 46.0 | 4.00e-01 | 100.0% | 55.3% |
| 2hdlA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 41.0 | 3.87e-01 | 88.3% | 61.0% |
| 2k2jA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 48.0 | 3.95e-01 | 96.7% | 75.2% |
| 2vneA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 40.0 | 2.96e-01 | 100.0% | 27.6% |
| 5a0tB01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.57 | 42.0 | 2.73e-01 | 81.7% | 48.1% |
| 7jrmA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 46.0 | 4.30e-01 | 100.0% | 73.0% |
| 2owpA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 47.0 | 3.81e-01 | 100.0% | 69.0% |
| 6s8zA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 43.0 | 4.27e-01 | 100.0% | 82.3% |
| 4c0dB00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.56 | 42.0 | 3.04e-01 | 96.7% | 26.7% |
| 1azwA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 39.0 | 2.47e-01 | 73.3% | 21.1% |
| 1foeC02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 45.0 | 3.48e-01 | 100.0% | 40.4% |
| 5bv3D01 | 3.30.200.40 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Scavenger mRNA decapping enzyme, N-terminal domain | 0.55 | 36.0 | 3.05e-01 | 75.0% | 36.6% |
| 1v89A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 46.0 | 3.75e-01 | 96.7% | 72.9% |
| 1qypA00 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.54 | 37.0 | 3.83e-01 | 98.3% | 77.2% |
| 6dnzA02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.54 | 46.0 | 3.37e-01 | 100.0% | 97.2% |
| 4xq7A01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.54 | 46.0 | 3.48e-01 | 98.3% | 69.9% |
| 2i1yA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.54 | 40.0 | 2.65e-01 | 83.3% | 36.6% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 41.0 | 4.01e-01 | 100.0% | 75.4% |
| 3lq6A02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.53 | 36.0 | 3.05e-01 | 73.3% | 80.7% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 41.0 | 4.08e-01 | 96.7% | 81.5% |
| 3a5zB01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 40.0 | 4.04e-01 | 100.0% | 85.7% |
| 5tgnA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 43.0 | 3.68e-01 | 100.0% | 75.2% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.51 | 35.0 | 3.81e-01 | 98.3% | 91.7% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 40.0 | 3.97e-01 | 100.0% | 85.7% |
| 4b6mB00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.51 | 44.0 | 4.08e-01 | 100.0% | 84.8% |
| 2oc3A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.50 | 39.0 | 2.66e-01 | 93.3% | 24.0% |
| 7arcC01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.50 | 40.0 | 3.20e-01 | 91.7% | 43.7% |
| 5e4bA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 42.0 | 3.12e-01 | 100.0% | 45.5% |
| 2e50B02 | 3.30.1120.90 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Nucleosome assembly protein | 0.50 | 41.0 | 3.52e-01 | 100.0% | 79.3% |
| 4i8oA01 | 3.30.310.240 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain | 0.50 | 44.0 | 3.89e-01 | 100.0% | 86.5% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 295937 | 2008.1.1.54 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › R-HINP1I | 0.70 | 51.0 | 3.37e-01 | 100.0% | 19.0% |
| 3404320 | 395.1.1.1 ↗ | few secondary structure elements › Midkine-related › Midkine-related › Midkine-related › PTN_MK_C | 0.69 | 45.0 | 5.07e-01 | 70.0% | 93.0% |
| 3523220 | 395.1.1.1 ↗ | few secondary structure elements › Midkine-related › Midkine-related › Midkine-related › PTN_MK_C | 0.68 | 46.0 | 4.98e-01 | 71.7% | 88.0% |
| 4076295 | 375.1.1.88 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ogr_Delta | 0.67 | 45.0 | 4.72e-01 | 98.3% | 78.2% |
| 5028736 | 316.1.1.41 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › DUF6036 | 0.66 | 48.0 | 3.24e-01 | 78.3% | 37.8% |
| 5082784 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.63 | 53.0 | 4.72e-01 | 100.0% | 64.4% |
| 3278081 | 2.4.1.15 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2, CysA_C_terminal | 0.63 | 44.0 | 3.51e-01 | 95.0% | 36.7% |
| None | — | 0.63 | 46.0 | 3.02e-01 | 95.0% | 18.4% | |
| 3933099 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.62 | 47.0 | 4.23e-01 | 100.0% | 58.8% |
| 3334635 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.61 | 49.0 | 3.52e-01 | 88.3% | 47.8% |
| 3181024 | 719.1.1.2 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF | 0.60 | 51.0 | 4.10e-01 | 100.0% | 84.6% |
| 4974942 | 7516.1.1.26 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_tranf_2_3 | 0.59 | 48.0 | 2.95e-01 | 90.0% | 24.2% |
| 3281218 | 3812.1.1.0 ↗ | alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE | 0.58 | 44.0 | 3.44e-01 | 90.0% | 37.0% |
| 4440839 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.58 | 42.0 | 2.72e-01 | 83.3% | 15.5% |
| 3819014 | 243.3.1.47 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF7074 | 0.58 | 50.0 | 4.50e-01 | 100.0% | 71.4% |
| 3059317 | 4.1.1.116 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_14 | 0.57 | 46.0 | 3.90e-01 | 98.3% | 50.9% |
| 4350188 | 3504.2.1.1 ↗ | beta barrels › MutM N-terminal domain-like › N-terminal domain of MutM-like DNA repair proteins › N-terminal domain of MutM-like DNA repair proteins › Fapy_DNA_glyco | 0.57 | 48.0 | 3.60e-01 | 96.7% | 76.9% |
| 4101580 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.57 | 46.0 | 4.49e-01 | 100.0% | 81.5% |
| 4037383 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.56 | 46.0 | 4.52e-01 | 100.0% | 83.1% |
| 5036065 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.56 | 49.0 | 4.62e-01 | 100.0% | 86.7% |
| 3473243 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 48.0 | 3.83e-01 | 100.0% | 78.5% |
| 3199266 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.56 | 46.0 | 2.81e-01 | 100.0% | 12.7% |
| 3280330 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.56 | 42.0 | 2.69e-01 | 100.0% | 14.2% |
| 3939538 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.56 | 46.0 | 3.18e-01 | 100.0% | 52.0% |
| 3221229 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 36.0 | 3.88e-01 | 96.7% | 88.9% |
| 3457651 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 41.0 | 2.71e-01 | 83.3% | 17.3% |
| 3399696 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.56 | 46.0 | 3.34e-01 | 100.0% | 60.5% |
| 5014254 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.55 | 44.0 | 4.44e-01 | 100.0% | 91.7% |
| 4872941 | 10.2.1.43 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat_C | 0.55 | 37.0 | 3.06e-01 | 70.0% | 77.3% |
| 3265170 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.55 | 45.0 | 4.46e-01 | 96.7% | 86.2% |
| 3520079 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.55 | 47.0 | 3.87e-01 | 98.3% | 71.3% |
| 3232194 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.55 | 42.0 | 2.95e-01 | 85.0% | 36.7% |
| 3306779 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.55 | 45.0 | 4.42e-01 | 96.7% | 86.2% |
| 4038269 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.55 | 45.0 | 4.45e-01 | 100.0% | 87.7% |
| 3540088 | 220.1.1.184 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP | 0.55 | 47.0 | 3.73e-01 | 100.0% | 73.8% |
| 4681738 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.54 | 42.0 | 3.21e-01 | 95.0% | 32.7% |
| 3582433 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.54 | 45.0 | 3.53e-01 | 91.7% | 71.1% |
| 3948020 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.54 | 42.0 | 3.61e-01 | 90.0% | 97.3% |
| 5013017 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.54 | 46.0 | 3.51e-01 | 100.0% | 55.5% |
| 5006562 | 2008.1.1.178 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NA-iREase1 | 0.54 | 45.0 | 3.48e-01 | 100.0% | 55.5% |
| 3634106 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.54 | 46.0 | 3.53e-01 | 100.0% | 80.7% |
| 3950208 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.54 | 40.0 | 3.99e-01 | 100.0% | 78.5% |
| 3212498 | 243.3.1.70 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PF30099 | 0.54 | 46.0 | 4.09e-01 | 98.3% | 74.4% |
| 3599172 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 39.0 | 3.90e-01 | 100.0% | 76.9% |
| 4284764 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.53 | 40.0 | 3.93e-01 | 100.0% | 78.5% |
| 3258452 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.53 | 41.0 | 3.33e-01 | 85.0% | 62.5% |
| 4101535 | 331.3.1.10 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AtaL | 0.53 | 42.0 | 3.24e-01 | 100.0% | 36.6% |
| 3339362 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.53 | 45.0 | 3.23e-01 | 93.3% | 44.6% |
| 4446791 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.53 | 41.0 | 4.05e-01 | 100.0% | 81.5% |
| 4146937 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.53 | 41.0 | 4.10e-01 | 100.0% | 83.1% |
| 3697893 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.53 | 44.0 | 2.56e-01 | 95.0% | 27.9% |
| 3728855 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 45.0 | 4.26e-01 | 100.0% | 85.3% |
| 3608236 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.53 | 43.0 | 4.27e-01 | 96.7% | 86.2% |
| 3587662 | 330.18.1.0 ↗ | a+b two layers › dsRBD-like › Anti-CRISPR protein AcrIIA6 › Anti-CRISPR protein AcrIIA6 | 0.52 | 39.0 | 3.53e-01 | 85.0% | 63.3% |
| 4051625 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.52 | 40.0 | 4.01e-01 | 100.0% | 83.1% |
| 3421079 | 2003.1.2.102 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3, Pyr_redox_2 | 0.52 | 45.0 | 2.93e-01 | 100.0% | 45.7% |
| 4156259 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 37.0 | 2.45e-01 | 100.0% | 16.3% |
| 4201878 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.51 | 40.0 | 3.92e-01 | 100.0% | 83.1% |
| 5038162 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.51 | 41.0 | 3.07e-01 | 95.0% | 49.7% |
| 4028885 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.51 | 40.0 | 3.93e-01 | 100.0% | 83.1% |
| 3220074 | 244.2.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain | 0.51 | 38.0 | 3.33e-01 | 85.0% | 59.0% |
| 3192363 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.51 | 42.0 | 2.61e-01 | 100.0% | 26.9% |
| 3576152 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.51 | 44.0 | 2.79e-01 | 96.7% | 30.4% |
| 4967863 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.51 | 38.0 | 3.10e-01 | 100.0% | 40.8% |
D2
high
residues 70-140
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7oodf01 | 3.10.430.100 | Alpha Beta › Roll › Ribosomal Protein L9; domain 2 › Ribosomal protein L9, C-terminal domain | 0.66 | 57.0 | 5.59e-01 | 100.0% | 97.4% |
| 1uqwA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.59 | 38.0 | 3.29e-01 | 100.0% | 41.1% |
| 2o3oA02 | 3.30.310.160 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YycH protein, domain 2 | 0.59 | 50.0 | 4.32e-01 | 100.0% | 91.7% |
| 3dmqA07 | 3.30.360.80 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › | 0.58 | 37.0 | 3.72e-01 | 85.9% | 63.5% |
| 2jzkA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.57 | 43.0 | 3.96e-01 | 85.9% | 86.4% |
| 4fajA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 50.0 | 3.84e-01 | 100.0% | 56.0% |
| 1vr5A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 41.0 | 3.27e-01 | 100.0% | 37.4% |
| 4khbD02 | 2.30.29.220 | Mainly Beta › Roll › PH-domain like › Structure-specific recognition protein (SSRP1) | 0.57 | 47.0 | 4.51e-01 | 93.0% | 82.7% |
| 4gl8A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 49.0 | 3.88e-01 | 100.0% | 51.9% |
| 2d5wA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 48.0 | 3.39e-01 | 98.6% | 56.1% |
| 5kztA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 48.0 | 3.77e-01 | 100.0% | 54.8% |
| 1xocA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.55 | 48.0 | 3.80e-01 | 100.0% | 51.6% |
| 2grvA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.55 | 48.0 | 3.66e-01 | 100.0% | 54.0% |
| 2lfuA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.55 | 46.0 | 3.92e-01 | 100.0% | 76.0% |
| 4oevA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.54 | 47.0 | 3.72e-01 | 100.0% | 49.0% |
| 2m3xC02 | 2.40.10.360 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.53 | 37.0 | 3.83e-01 | 81.7% | 78.3% |
| 3hmuB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 42.0 | 3.16e-01 | 91.5% | 52.9% |
| 3wjcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 43.0 | 3.50e-01 | 100.0% | 83.7% |
| 2ke9A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 36.0 | 3.70e-01 | 74.6% | 83.6% |
| 1s1dA00 | 2.120.10.100 | Mainly Beta › 6 Propeller › Neuraminidase › Apyrase | 0.51 | 41.0 | 2.74e-01 | 91.5% | 75.4% |
| 1wyuB02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.50 | 41.0 | 3.43e-01 | 91.5% | 64.8% |
| 3bjqA00 | 3.90.1690.10 | Alpha Beta › Alpha-Beta Complex › phage-related protein like fold › phage-related protein like domain | 0.50 | 41.0 | 2.87e-01 | 100.0% | 57.4% |
| 1v72A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.50 | 41.0 | 3.68e-01 | 91.5% | 80.2% |
| 5k19A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 37.0 | 2.41e-01 | 81.7% | 18.9% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4356092 | 523.1.1.1 ↗ | a+b two layers › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal_L9_C | 0.64 | 55.0 | 5.19e-01 | 100.0% | 82.2% |
| 4962828 | 283.2.1.20 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › DUF7261 | 0.59 | 48.0 | 4.10e-01 | 95.8% | 93.6% |
| 3487656 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 45.0 | 4.14e-01 | 94.4% | 65.3% |
| 4940436 | 3414.1.1.0 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein | 0.57 | 46.0 | 4.34e-01 | 91.5% | 81.1% |
| 3949184 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.57 | 49.0 | 3.69e-01 | 100.0% | 52.4% |
| 3926774 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.56 | 44.0 | 3.57e-01 | 85.9% | 52.1% |
| 3630369 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.56 | 44.0 | 3.68e-01 | 95.8% | 46.7% |
| 4890130 | 220.1.1.10 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SSrecog | 0.56 | 43.0 | 4.47e-01 | 93.0% | 92.4% |
| 5078685 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.55 | 39.0 | 3.82e-01 | 76.1% | 72.5% |
| 3532957 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.55 | 43.0 | 3.55e-01 | 94.4% | 45.0% |
| 4578445 | 206.1.2.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › SAICAR_synt | 0.54 | 43.0 | 3.16e-01 | 94.4% | 78.3% |
| 3637238 | 719.2.1.1 ↗ | beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N | 0.53 | 39.0 | 3.60e-01 | 81.7% | 76.0% |
| 3826751 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.53 | 39.0 | 3.82e-01 | 80.3% | 75.0% |
| 3634889 | 136.1.1.3 ↗ | alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › An_peroxidase | 0.52 | 41.0 | 2.40e-01 | 85.9% | 64.6% |
| 3940929 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.51 | 40.0 | 2.60e-01 | 91.5% | 33.4% |
| None | — | 0.50 | 33.0 | 2.03e-01 | 100.0% | 9.3% | |
| 5063003 | 4.1.1.120 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_16 | 0.50 | 35.0 | 3.53e-01 | 73.2% | 87.1% |