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LC765218.1__BEG72572.1__RVBP21_2000__00200
Bact-VirLC765218.1__BEG72572.1__RVBP21_2000__00200
Identity
- Accession:
- LC765218 ↗
- Kingdom:
- phage
Quality
87.4
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-85
Domain cluster:
rep: MF063068.1__ARV77476.1__NOXIFER_311__00307__D4-76
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vmaA03 | 3.30.2060.10 | Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain | 0.67 | 55.0 | 5.36e-01 | 88.9% | 100.0% |
| 3k2tA01 | 3.30.505.50 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain | 0.54 | 30.0 | 3.74e-01 | 71.6% | 93.5% |
| 3wirA03 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.54 | 35.0 | 3.79e-01 | 84.0% | 78.3% |
| 4dm5A00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.54 | 38.0 | 3.78e-01 | 75.3% | 79.3% |
| 1h54A03 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.53 | 34.0 | 3.59e-01 | 84.0% | 73.0% |
| 4e5sA02 | 3.50.30.60 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › LD-carboxypeptidase A C-terminal domain-like | 0.52 | 35.0 | 2.86e-01 | 70.4% | 98.2% |
| 2qmiA02 | 2.40.128.210 | Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain | 0.52 | 35.0 | 3.34e-01 | 70.4% | 79.0% |
| 1ei5A03 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 38.0 | 3.53e-01 | 77.8% | 83.3% |
| 2zutA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 30.0 | 3.32e-01 | 84.0% | 76.3% |
| 1mpgA01 | 3.30.310.20 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain | 0.50 | 42.0 | 3.82e-01 | 95.1% | 75.9% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4632179 | 506.2.1.1 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UB2H | 0.69 | 57.0 | 5.42e-01 | 88.9% | 94.7% |
| 3520790 | 3735.1.1.0 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein | 0.61 | 47.0 | 3.11e-01 | 81.5% | 64.5% |
| 3475247 | 4184.1.1.1 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 | 0.60 | 44.0 | 4.65e-01 | 96.3% | 90.0% |
| 3734423 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.60 | 41.0 | 2.62e-01 | 71.6% | 78.3% |
| 4243492 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.59 | 33.0 | 3.78e-01 | 72.8% | 75.0% |
| 3430829 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.59 | 49.0 | 4.10e-01 | 92.6% | 95.0% |
| 3988729 | 4097.1.1.0 ↗ | a+b two layers › Lp2179-like › Lp2179-like › Lp2179-like | 0.57 | 49.0 | 4.67e-01 | 96.3% | 100.0% |
| 3496211 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.57 | 41.0 | 4.34e-01 | 97.5% | 90.0% |
| 3478153 | 4184.1.1.1 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 | 0.55 | 40.0 | 4.22e-01 | 96.3% | 90.0% |
| 4554426 | 3097.1.1.1 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C | 0.55 | 31.0 | 3.67e-01 | 74.1% | 83.3% |
| 5065208 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 36.0 | 4.25e-01 | 71.6% | 98.2% |
| 4011771 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.52 | 46.0 | 2.70e-01 | 98.8% | 98.3% |
| 4951171 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.52 | 37.0 | 3.93e-01 | 74.1% | 85.7% |
| 3685094 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.52 | 40.0 | 3.26e-01 | 81.5% | 78.0% |
| 3361286 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.52 | 38.0 | 2.60e-01 | 82.7% | 77.4% |
| 3575745 | 5.1.4.90 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Itfg2 | 0.51 | 44.0 | 2.89e-01 | 96.3% | 95.8% |
| 3199240 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.51 | 39.0 | 2.86e-01 | 86.4% | 57.3% |
| 2184 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 38.0 | 2.70e-01 | 84.0% | 94.4% |
| 3209344 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.50 | 43.0 | 3.61e-01 | 95.1% | 97.1% |