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LC765218.1__BEG72582.1__RVBP21_2100__00210

Bact-Vir

LC765218.1__BEG72582.1__RVBP21_2100__00210

Identity

Accession:
LC765218 ↗
Kingdom:
phage

Quality

83.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_BRkr

TaxID: 3040668

Cluster

View cluster (30 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-67
PDB
Domain cluster: rep: MN563784.1__QGK89956.1__X__00146__D9-71
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.79 61.0 6.04e-01 100.0% 79.0%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.77 57.0 5.99e-01 100.0% 87.0%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 60.0 5.86e-01 100.0% 77.8%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 67.0 6.53e-01 100.0% 89.1%
2vgeA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.77 67.0 4.53e-01 100.0% 27.5%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 60.0 5.50e-01 100.0% 64.9%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 57.0 5.57e-01 100.0% 72.3%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 56.0 5.79e-01 100.0% 82.1%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 66.0 5.93e-01 100.0% 70.4%
2gtjA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 66.0 6.11e-01 100.0% 77.0%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 61.0 6.02e-01 100.0% 83.9%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 56.0 5.65e-01 98.3% 79.7%
2ky9A01 2.30.30.1130 Mainly Beta › Roll › SH3 type barrels. › 0.75 63.0 6.06e-01 100.0% 80.6%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 62.0 5.71e-01 100.0% 71.1%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 64.0 5.93e-01 100.0% 76.0%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 66.0 6.57e-01 100.0% 96.7%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 56.0 5.45e-01 98.3% 73.8%
2creA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 64.0 6.03e-01 100.0% 81.7%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 63.0 6.31e-01 100.0% 95.0%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.73 62.0 5.20e-01 96.6% 100.0%
2rqrA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 63.0 4.97e-01 100.0% 47.9%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 64.0 5.98e-01 100.0% 81.1%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 64.0 6.26e-01 100.0% 92.2%
4epcA01 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.72 63.0 5.70e-01 100.0% 81.5%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 64.0 6.19e-01 100.0% 89.4%
2kxcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 62.0 6.00e-01 100.0% 86.6%
6uzjA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 60.0 5.97e-01 100.0% 90.5%
7r3mA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 62.0 5.55e-01 100.0% 70.7%
1m9sA04 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.70 62.0 5.49e-01 100.0% 82.6%
2i0nA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 59.0 6.00e-01 100.0% 98.2%
3pieC09 2.30.30.750 Mainly Beta › Roll › SH3 type barrels. › 0.70 63.0 5.26e-01 100.0% 65.7%
2akkA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 56.0 5.29e-01 100.0% 74.3%
4epcA02 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.69 61.0 5.80e-01 100.0% 93.0%
3g1jA00 2.30.30.350 Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. 0.69 61.0 5.32e-01 100.0% 80.0%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.69 58.0 5.74e-01 100.0% 88.9%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 61.0 5.69e-01 100.0% 79.2%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 61.0 5.67e-01 100.0% 80.6%
2eyzA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 50.0 4.35e-01 86.4% 54.9%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.64 55.0 4.15e-01 100.0% 39.1%
2k5fA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.63 54.0 4.92e-01 100.0% 77.1%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 54.0 5.07e-01 100.0% 80.8%
3iutA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.61 52.0 3.66e-01 100.0% 34.9%
2mdrA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.61 42.0 3.65e-01 72.9% 62.8%
7fctA01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.59 40.0 2.71e-01 71.2% 66.0%
1ha6A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 42.0 4.07e-01 86.4% 74.3%
3nqhA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 43.0 2.80e-01 89.8% 47.9%
3b5mA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 42.0 3.49e-01 93.2% 95.8%
4ofqA02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 45.0 3.34e-01 100.0% 38.7%
4ikcA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.50 39.0 2.58e-01 86.4% 40.5%
4ak1A02 2.30.30.1270 Mainly Beta › Roll › SH3 type barrels. › 0.50 35.0 3.51e-01 78.0% 90.6%
ECOD (78)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4091379 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 73.0 6.89e-01 100.0% 78.6%
4170983 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 75.0 6.89e-01 100.0% 77.3%
3243536 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 69.0 6.01e-01 100.0% 62.4%
3484084 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 69.0 5.86e-01 100.0% 57.9%
4027263 4.1.1.104 ↗ beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.81 63.0 4.97e-01 100.0% 41.7%
4003015 4.1.1.318 ↗ beta barrels › SH3 › SH3 › SH3 › PF26085 0.80 68.0 6.88e-01 100.0% 93.2%
4960540 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 70.0 6.80e-01 100.0% 87.7%
4203592 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 62.0 5.99e-01 100.0% 76.9%
3214131 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 59.0 5.25e-01 100.0% 58.7%
3484477 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.77 67.0 6.35e-01 100.0% 81.4%
3888226 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.77 68.0 6.30e-01 100.0% 77.3%
166904 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.77 67.0 6.47e-01 100.0% 86.4%
3218647 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 69.0 6.51e-01 100.0% 85.7%
3698582 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.77 68.0 6.42e-01 100.0% 82.9%
3738641 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.77 62.0 5.65e-01 100.0% 68.0%
3585510 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 68.0 6.00e-01 100.0% 72.9%
3793311 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 67.0 6.68e-01 100.0% 96.7%
3766659 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.76 60.0 6.01e-01 100.0% 83.3%
3887433 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 67.0 5.41e-01 100.0% 97.4%
3742938 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.76 62.0 6.00e-01 100.0% 80.0%
4012002 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 68.0 6.41e-01 100.0% 84.3%
3234274 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.76 65.0 6.13e-01 100.0% 80.0%
3793656 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.75 60.0 4.42e-01 100.0% 34.5%
3637508 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.75 59.0 5.78e-01 100.0% 78.5%
3702154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 59.0 5.42e-01 100.0% 66.7%
3713334 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.75 63.0 6.34e-01 100.0% 90.0%
3972820 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 66.0 5.96e-01 100.0% 82.5%
3706000 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.74 67.0 6.16e-01 100.0% 89.3%
3677709 4.1.1.103 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_12 0.74 67.0 6.02e-01 100.0% 88.7%
3059317 4.1.1.116 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_14 0.74 65.0 5.31e-01 100.0% 93.8%
3931715 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.74 65.0 5.45e-01 98.3% 96.0%
2121553 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.74 65.0 6.14e-01 100.0% 82.9%
3207081 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.74 66.0 6.37e-01 98.3% 93.8%
4207556 4.1.1.58 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_3 0.74 65.0 6.15e-01 100.0% 97.1%
3172122 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.74 65.0 6.54e-01 100.0% 98.3%
3787905 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.73 64.0 6.07e-01 98.3% 82.9%
4022025 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.73 66.0 4.91e-01 100.0% 42.1%
3216019 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 64.0 6.27e-01 100.0% 96.9%
3482680 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 65.0 6.36e-01 100.0% 90.8%
25836 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.73 63.0 5.98e-01 100.0% 80.6%
3581631 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.73 66.0 6.38e-01 100.0% 90.8%
5034724 4.1.1.482 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4314 0.73 58.0 6.01e-01 94.9% 94.5%
4565130 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 58.0 4.93e-01 100.0% 54.7%
1120123 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 63.0 5.78e-01 100.0% 84.6%
3385654 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 62.0 4.95e-01 98.3% 64.2%
3395150 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 56.0 5.62e-01 100.0% 83.3%
3688068 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.71 64.0 4.72e-01 100.0% 48.0%
3025579 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.71 62.0 6.18e-01 100.0% 98.3%
4054649 4.1.1.86 ↗ beta barrels › SH3 › SH3 › SH3 › GW 0.71 63.0 5.83e-01 100.0% 93.3%
4883261 4.1.1.76 ↗ beta barrels › SH3 › SH3 › SH3 › NdhO 0.71 62.0 5.32e-01 100.0% 74.7%
3591144 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.71 63.0 4.58e-01 98.3% 38.0%
3740208 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.70 59.0 5.77e-01 100.0% 83.1%
4542692 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 61.0 5.47e-01 100.0% 71.8%
3736953 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.70 62.0 6.05e-01 100.0% 92.3%
4405469 4.1.1.248 ↗ beta barrels › SH3 › SH3 › SH3 › CABIT 0.70 61.0 5.25e-01 100.0% 63.2%
3185321 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.69 63.0 5.78e-01 100.0% 81.3%
3630782 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.68 62.0 4.59e-01 100.0% 42.1%
3886492 4.1.1.154 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4772 0.67 59.0 5.42e-01 100.0% 76.0%
3812766 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.67 61.0 5.74e-01 100.0% 85.7%
4055974 4.1.1.248 ↗ beta barrels › SH3 › SH3 › SH3 › CABIT 0.66 57.0 4.55e-01 100.0% 50.4%
4105348 4.1.1.394 ↗ beta barrels › SH3 › SH3 › SH3 › SlpA 0.66 57.0 5.59e-01 98.3% 98.4%
3932484 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 57.0 5.56e-01 100.0% 87.5%
3597513 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 46.0 4.79e-01 93.2% 80.0%
165654 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.66 59.0 5.45e-01 100.0% 78.4%
3450257 4.1.1.150 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3123 0.65 59.0 4.97e-01 100.0% 66.3%
3706854 219.1.1.4 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 0.65 56.0 3.53e-01 100.0% 28.2%
4855772 219.1.1.1 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 0.65 56.0 4.22e-01 100.0% 51.6%
3419158 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.64 56.0 5.48e-01 100.0% 86.2%
3810562 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 55.0 5.10e-01 100.0% 77.3%
4220608 4.6.1.0 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.62 50.0 4.66e-01 100.0% 70.7%
3363751 4.1.1.246 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_Coilin 0.60 53.0 4.42e-01 100.0% 79.0%
3843359 4.1.1.246 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_Coilin 0.59 52.0 4.66e-01 100.0% 72.9%
3587789 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.58 45.0 3.75e-01 84.7% 78.1%
3831299 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.57 51.0 4.85e-01 100.0% 90.0%
3631165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 48.0 4.37e-01 100.0% 70.6%
3503000 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 49.0 4.39e-01 100.0% 87.1%
3315510 4.1.1.246 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_Coilin 0.54 45.0 3.79e-01 100.0% 74.5%
4034031 4056.1.1.0 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.54 44.0 4.39e-01 100.0% 89.2%