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LC768485.1__BEH88050.1__X__00003

Bact-Vir

LC768485.1__BEH88050.1__X__00003

Identity

Accession:
LC768485 ↗
Kingdom:
phage

Quality

87.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 103-180
PDB
D2 medium residues 8-60
PDB
Domain cluster: representative
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.89 64.0 6.94e-01 75.5% 88.9%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.87 59.0 4.80e-01 71.7% 41.5%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 59.0 5.96e-01 73.6% 85.2%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.85 58.0 5.76e-01 71.7% 69.6%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.85 59.0 5.94e-01 73.6% 72.2%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 58.0 5.44e-01 71.7% 63.5%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.84 60.0 5.95e-01 75.5% 89.1%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 57.0 5.25e-01 71.7% 56.7%
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 59.0 5.43e-01 75.5% 63.6%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.81 58.0 4.31e-01 75.5% 34.9%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 66.0 6.12e-01 88.7% 81.8%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 54.0 5.44e-01 71.7% 74.1%
1a9xA04 1.10.1030.10 Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain 0.79 55.0 3.92e-01 73.6% 27.3%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 54.0 5.62e-01 71.7% 79.2%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 53.0 5.31e-01 71.7% 72.7%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.77 55.0 4.43e-01 75.5% 42.6%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.77 57.0 5.66e-01 79.2% 80.4%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 53.0 5.71e-01 73.6% 93.2%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.77 53.0 3.94e-01 73.6% 77.4%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 52.0 4.93e-01 71.7% 62.5%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 52.0 4.22e-01 71.7% 40.8%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 52.0 5.68e-01 71.7% 100.0%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 52.0 4.27e-01 71.7% 41.9%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.75 54.0 4.43e-01 75.5% 48.9%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.75 53.0 4.28e-01 75.5% 44.7%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 51.0 3.75e-01 71.7% 28.4%
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.75 62.0 4.41e-01 88.7% 75.4%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 51.0 4.52e-01 71.7% 50.0%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 51.0 4.60e-01 71.7% 63.4%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 50.0 5.18e-01 71.7% 80.0%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 50.0 3.74e-01 71.7% 31.8%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 52.0 4.80e-01 75.5% 62.7%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 49.0 4.10e-01 71.7% 41.9%
3py8A04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.72 49.0 3.58e-01 71.7% 36.1%
7pzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 49.0 4.18e-01 73.6% 66.3%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 48.0 4.15e-01 71.7% 49.4%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 49.0 4.41e-01 77.4% 68.0%
1g2hA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 50.0 4.79e-01 79.2% 73.8%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 47.0 4.39e-01 73.6% 65.2%
2di3A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 48.0 4.32e-01 77.4% 68.0%
1l0oC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 45.0 4.41e-01 71.7% 84.2%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 45.0 3.96e-01 75.5% 67.5%
2f2eA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 41.0 3.60e-01 71.7% 48.4%
4bxoA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.58 41.0 3.82e-01 73.6% 67.2%
3gwzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 45.0 3.95e-01 92.5% 89.9%
3lstA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 48.0 4.21e-01 100.0% 90.7%
2ofyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.53 39.0 3.58e-01 79.2% 61.4%
2dg8D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 41.0 3.01e-01 98.1% 46.8%
2h21A02 3.90.1420.10 Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 2 › Rubisco LSMT, substrate-binding domain 0.50 34.0 2.50e-01 73.6% 23.0%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5043241 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.93 64.0 7.37e-01 71.7% 95.0%
3922450 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.93 64.0 7.33e-01 71.7% 97.5%
5002776 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.93 64.0 5.43e-01 71.7% 50.0%
5063318 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.92 63.0 6.29e-01 71.7% 70.9%
3942514 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.92 66.0 6.87e-01 75.5% 80.0%
4961899 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.91 64.0 5.92e-01 73.6% 61.5%
4054648 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 64.0 6.30e-01 73.6% 72.7%
4946254 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 62.0 6.68e-01 71.7% 84.4%
3962903 101.1.2.486 alpha arrays › HTH › HTH › winged helix domain › HTH_58 0.89 62.0 7.07e-01 71.7% 97.5%
4551350 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.88 61.0 4.87e-01 71.7% 40.0%
3210747 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.88 63.0 6.80e-01 75.5% 91.1%
4031535 101.1.1.275 alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.87 60.0 5.75e-01 71.7% 65.0%
4008322 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.87 64.0 6.34e-01 77.4% 78.2%
4031756 101.1.2.645 alpha arrays › HTH › HTH › winged helix domain › HTH_40 0.87 60.0 4.99e-01 71.7% 44.7%
4131887 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.86 59.0 5.09e-01 71.7% 48.1%
3988724 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 64.0 6.17e-01 79.2% 75.0%
3879118 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.86 62.0 6.11e-01 75.5% 74.5%
5022417 101.1.3.8 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 0.86 59.0 4.94e-01 71.7% 44.7%
5030780 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.86 60.0 6.18e-01 73.6% 80.0%
4334657 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.85 61.0 6.57e-01 75.5% 91.1%
1035813 101.1.6.2 alpha arrays › HTH › HTH › TrpR › HTH_7 0.85 58.0 5.93e-01 71.7% 75.0%
5062650 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.85 59.0 4.41e-01 73.6% 32.0%
3590541 142.1.1.3 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.85 58.0 3.90e-01 71.7% 21.1%
139963 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 59.0 5.94e-01 73.6% 72.2%
5024511 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 71.0 7.30e-01 98.1% 96.0%
3942695 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 58.0 5.39e-01 71.7% 58.5%
4973199 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.84 59.0 5.67e-01 73.6% 66.7%
5028266 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 60.0 5.82e-01 75.5% 69.5%
5043001 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.84 57.0 4.50e-01 71.7% 36.2%
5011648 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.84 68.0 7.03e-01 88.7% 92.0%
1159643 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.84 60.0 5.39e-01 75.5% 69.0%
3933366 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.83 65.0 5.84e-01 83.0% 67.1%
4937081 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 57.0 5.31e-01 71.7% 58.5%
3603167 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.83 61.0 5.68e-01 77.4% 64.6%
3287232 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 57.0 5.04e-01 71.7% 52.0%
4974140 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.83 60.0 4.73e-01 75.5% 43.0%
3904156 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 60.0 6.39e-01 77.4% 95.6%
4943227 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.83 58.0 6.15e-01 73.6% 88.9%
4007717 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.83 56.0 4.87e-01 71.7% 47.5%
4950689 101.1.1.275 alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.82 57.0 5.86e-01 73.6% 78.0%
3066183 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.81 58.0 4.58e-01 75.5% 39.0%
5038587 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.81 56.0 5.43e-01 73.6% 66.7%
5051816 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 55.0 5.11e-01 71.7% 58.5%
4952293 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.80 54.0 5.99e-01 71.7% 97.5%
3590732 101.1.1.364 alpha arrays › HTH › HTH › Three-helical HTH › HTH_49 0.79 54.0 5.77e-01 71.7% 84.4%
3411416 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 55.0 5.85e-01 73.6% 90.9%
3565285 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.79 63.0 5.88e-01 88.7% 70.8%
3976103 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.78 54.0 5.03e-01 71.7% 60.0%
4659976 101.1.1.25 alpha arrays › HTH › HTH › Three-helical HTH › DUF433 0.78 58.0 4.20e-01 79.2% 30.1%
3693312 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 54.0 5.23e-01 73.6% 68.3%
4008959 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 55.0 5.43e-01 75.5% 76.4%
3932988 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 53.0 5.33e-01 75.5% 74.5%
3391053 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 54.0 5.67e-01 77.4% 93.3%
2332937 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.74 51.0 4.56e-01 71.7% 51.4%
3589184 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 61.0 5.35e-01 88.7% 68.0%
5060354 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 50.0 4.73e-01 71.7% 61.5%
3971636 101.28.1.0 alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins 0.74 51.0 5.53e-01 73.6% 100.0%
4984738 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 50.0 5.31e-01 71.7% 84.4%