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LC768490.1__BEH88487.1__X__00043
Bact-VirLC768490.1__BEH88487.1__X__00043
Identity
- Accession:
- LC768490 ↗
- Kingdom:
- phage
Quality
69.4
mean pLDDT
Taxonomy
TaxID: 2979978
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 27-110
Domain cluster:
rep: NC_019526.1__YP_007007422.1__F403_gp268__00267__D42-137
CATH (60)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6jhpA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.80 | 63.0 | 4.21e-01 | 83.3% | 87.9% |
| 3mi6A01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.80 | 63.0 | 4.18e-01 | 83.3% | 88.3% |
| 5nz7A01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.79 | 59.0 | 3.83e-01 | 77.4% | 62.5% |
| 4l9cA00 | 3.40.1000.30 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › | 0.72 | 57.0 | 4.60e-01 | 83.3% | 50.0% |
| 2xepB01 | 3.10.450.280 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.71 | 52.0 | 4.65e-01 | 76.2% | 71.1% |
| 3esiA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.70 | 55.0 | 4.72e-01 | 82.1% | 92.7% |
| 4ebrA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.70 | 52.0 | 4.12e-01 | 77.4% | 63.7% |
| 2lpuA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.69 | 51.0 | 4.20e-01 | 77.4% | 64.2% |
| 7wa9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.69 | 59.0 | 5.00e-01 | 95.2% | 90.8% |
| 7snsB01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.69 | 63.0 | 5.03e-01 | 100.0% | 92.6% |
| 3ua3A03 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.68 | 50.0 | 3.75e-01 | 77.4% | 97.5% |
| 1vprA03 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.67 | 61.0 | 4.91e-01 | 100.0% | 83.4% |
| 1gwyA00 | 2.60.270.20 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Cytolysin/lectin | 0.67 | 52.0 | 4.10e-01 | 83.3% | 88.6% |
| 1cbiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.66 | 59.0 | 5.05e-01 | 100.0% | 90.4% |
| 3jtyB01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.65 | 52.0 | 3.37e-01 | 85.7% | 44.3% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.65 | 54.0 | 4.48e-01 | 90.5% | 82.8% |
| 2mj7A00 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.65 | 50.0 | 4.14e-01 | 81.0% | 80.9% |
| 2l5pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.64 | 57.0 | 4.50e-01 | 100.0% | 59.4% |
| 3hqxA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 48.0 | 4.47e-01 | 79.8% | 100.0% |
| 5h9kA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.63 | 55.0 | 4.59e-01 | 100.0% | 61.0% |
| 6i8xA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.63 | 56.0 | 4.63e-01 | 100.0% | 84.6% |
| 3eliA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.63 | 53.0 | 4.47e-01 | 95.2% | 88.9% |
| 6psyA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.62 | 56.0 | 4.09e-01 | 100.0% | 96.0% |
| 1ew3A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.62 | 55.0 | 4.50e-01 | 100.0% | 64.8% |
| 2zylA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.62 | 53.0 | 3.92e-01 | 94.0% | 47.0% |
| 1qwdB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 54.0 | 4.40e-01 | 100.0% | 59.6% |
| 3sc7X01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.61 | 46.0 | 3.05e-01 | 79.8% | 45.5% |
| 3h3hB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 50.0 | 4.44e-01 | 90.5% | 80.8% |
| 2owpA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 49.0 | 4.32e-01 | 91.7% | 80.6% |
| 4kcaA03 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 51.0 | 4.95e-01 | 100.0% | 92.8% |
| 3zqsA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.59 | 39.0 | 3.85e-01 | 78.6% | 63.6% |
| 1bebA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 52.0 | 4.28e-01 | 100.0% | 64.1% |
| 2g18I00 | 3.40.1500.20 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › | 0.59 | 53.0 | 3.82e-01 | 100.0% | 65.5% |
| 3zs7A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.59 | 44.0 | 3.05e-01 | 78.6% | 46.2% |
| 1tu1A00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.59 | 50.0 | 4.16e-01 | 92.9% | 75.0% |
| 1aqbA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 51.0 | 4.09e-01 | 100.0% | 64.6% |
| 3ebwA01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 51.0 | 4.34e-01 | 100.0% | 69.7% |
| 1avgI00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 51.0 | 4.37e-01 | 100.0% | 69.7% |
| 3otlA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 49.0 | 4.10e-01 | 95.2% | 86.9% |
| 3al9A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 48.0 | 3.01e-01 | 90.5% | 37.4% |
| 4mb7A01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.58 | 51.0 | 4.42e-01 | 95.2% | 71.4% |
| 3a76A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 48.0 | 4.05e-01 | 90.5% | 82.7% |
| 3f7wA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 42.0 | 4.14e-01 | 77.4% | 87.9% |
| 4bumX00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.57 | 52.0 | 3.57e-01 | 100.0% | 38.2% |
| 3pu2B00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 49.0 | 4.08e-01 | 98.8% | 90.2% |
| 3u97A00 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.57 | 45.0 | 4.70e-01 | 90.5% | 93.5% |
| 1l3aA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.56 | 51.0 | 4.05e-01 | 100.0% | 69.3% |
| 6p3lA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 47.0 | 4.28e-01 | 92.9% | 80.9% |
| 1zylA01 | 3.30.200.70 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.56 | 40.0 | 4.35e-01 | 76.2% | 90.0% |
| 2p12A01 | 2.40.380.10 | Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like | 0.56 | 46.0 | 3.85e-01 | 100.0% | 49.7% |
| 6xrbA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.56 | 45.0 | 3.91e-01 | 90.5% | 75.5% |
| 3sy9C01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.55 | 47.0 | 3.17e-01 | 96.4% | 88.1% |
| 3ecfA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 48.0 | 4.21e-01 | 97.6% | 80.5% |
| 1pzdA02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.54 | 47.0 | 4.21e-01 | 95.2% | 77.4% |
| 1vlrA01 | 3.30.200.40 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Scavenger mRNA decapping enzyme, N-terminal domain | 0.54 | 45.0 | 4.26e-01 | 90.5% | 93.9% |
| 4hz9B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 45.0 | 4.04e-01 | 94.0% | 78.9% |
| 4js8A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 37.0 | 3.71e-01 | 73.8% | 85.4% |
| 6nu7A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 43.0 | 2.98e-01 | 94.0% | 78.9% |
| 1d8hA00 | 3.20.100.10 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like | 0.52 | 44.0 | 3.13e-01 | 96.4% | 74.0% |
| 2gfgA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.50 | 41.0 | 3.14e-01 | 88.1% | 69.6% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1853949 | 243.1.1.35 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › ORF_12_N | 0.81 | 53.0 | 4.84e-01 | 88.1% | 52.8% |
| 5053933 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.76 | 49.0 | 5.50e-01 | 76.2% | 84.6% |
| 3001014 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.71 | 54.0 | 4.38e-01 | 81.0% | 84.9% |
| 3785709 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.71 | 51.0 | 3.29e-01 | 76.2% | 39.5% |
| 3700623 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.71 | 65.0 | 4.95e-01 | 100.0% | 77.8% |
| 3431417 | 9.2.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF2921_N | 0.70 | 62.0 | 5.28e-01 | 100.0% | 87.9% |
| 5010092 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.70 | 55.0 | 4.91e-01 | 83.3% | 96.5% |
| 3658748 | 4099.1.1.14 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Knl1_RWD_C | 0.69 | 53.0 | 4.97e-01 | 79.8% | 76.0% |
| 5079413 | 5.1.3.272 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SBBP | 0.69 | 50.0 | 3.45e-01 | 75.0% | 31.3% |
| 865437 | 241.1.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C | 0.69 | 51.0 | 4.15e-01 | 77.4% | 62.3% |
| 3916012 | 192.29.1.276 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › FmiP_Thoc5 | 0.69 | 51.0 | 3.94e-01 | 78.6% | 68.1% |
| 3217673 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.68 | 47.0 | 4.33e-01 | 79.8% | 56.2% |
| 4114029 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.67 | 51.0 | 3.48e-01 | 81.0% | 43.6% |
| 3217505 | 9.1.1.55 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7045 | 0.65 | 58.0 | 5.24e-01 | 100.0% | 89.6% |
| 1140712 | 331.9.1.2 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C | 0.65 | 50.0 | 4.26e-01 | 81.0% | 87.7% |
| 3206580 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.64 | 48.0 | 3.99e-01 | 79.8% | 88.7% |
| 3742163 | 109.4.1.1794 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd | 0.64 | 47.0 | 3.04e-01 | 76.2% | 56.4% |
| 3478405 | 3338.2.1.0 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB | 0.64 | 53.0 | 4.64e-01 | 92.9% | 84.6% |
| 3784764 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.64 | 46.0 | 3.02e-01 | 76.2% | 44.3% |
| 5009577 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.63 | 53.0 | 4.71e-01 | 95.2% | 89.6% |
| 3947246 | 331.3.1.19 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VanA_C | 0.62 | 54.0 | 4.08e-01 | 95.2% | 70.0% |
| 3957605 | 243.1.1.35 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › ORF_12_N | 0.62 | 51.0 | 4.93e-01 | 89.3% | 78.9% |
| 3931011 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.62 | 54.0 | 4.75e-01 | 100.0% | 84.6% |
| 3793643 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.62 | 46.0 | 2.86e-01 | 78.6% | 24.4% |
| 1828798 | 9.1.1.5 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Triabin | 0.60 | 52.0 | 4.35e-01 | 100.0% | 61.5% |
| 362621 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.60 | 50.0 | 4.44e-01 | 90.5% | 80.8% |
| 3286756 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.60 | 49.0 | 4.46e-01 | 90.5% | 85.1% |
| 3716632 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.59 | 52.0 | 4.33e-01 | 96.4% | 77.9% |
| 3929507 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.59 | 46.0 | 4.45e-01 | 83.3% | 96.8% |
| 2126755 | 9.28.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Barrel domain in extracellular arabinanase › Barrel domain in extracellular arabinanase › GH43_C | 0.58 | 50.0 | 4.61e-01 | 100.0% | 75.9% |
| 1949063 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.58 | 48.0 | 4.53e-01 | 90.5% | 83.2% |
| 4160858 | 241.1.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C | 0.58 | 43.0 | 3.57e-01 | 79.8% | 75.2% |
| 3375268 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.57 | 48.0 | 3.59e-01 | 92.9% | 92.7% |
| 3214007 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.57 | 45.0 | 4.04e-01 | 89.3% | 68.8% |
| 3237828 | 331.9.1.9 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF26171 | 0.53 | 45.0 | 4.12e-01 | 95.2% | 70.0% |
| 3506274 | 331.2.1.7 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM1_C_vert_fung | 0.53 | 45.0 | 3.97e-01 | 95.2% | 92.8% |