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LC768500.1__BEH89755.1__X__00131

Bact-Vir

LC768500.1__BEH89755.1__X__00131

Identity

Accession:
LC768500 ↗
Kingdom:
phage

Quality

76.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 442-459_477-527
PDB
D2 high residues 755-850
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dnyA00 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.75 68.0 6.53e-01 97.9% 90.8%
6pxcA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.70 43.0 4.22e-01 100.0% 56.7%
2mizA00 2.60.40.2900 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 41.0 3.48e-01 100.0% 43.6%
4dloB01 4.10.1240.10 Few Secondary Structures › Irregular › Hormone receptor fold › GPCR, family 2, extracellular hormone receptor domain 0.56 31.0 3.63e-01 86.5% 78.8%
7chuA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.55 48.0 3.30e-01 100.0% 34.2%
1ujcA00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.50 44.0 3.81e-01 100.0% 68.6%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2581339 520.2.1.1 beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich 0.77 70.0 7.11e-01 97.9% 100.0%
185692 520.2.1.1 beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich 0.75 68.0 6.53e-01 97.9% 90.8%
3397074 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.64 40.0 3.57e-01 97.9% 44.4%
3774325 210.1.3.4 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 0.56 47.0 3.67e-01 92.7% 92.3%
3415678 708.1.1.4 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.56 33.0 3.94e-01 91.7% 85.3%
3627420 7525.1.1.1 a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_1 0.53 46.0 3.61e-01 100.0% 67.7%
3389940 708.1.1.4 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.52 33.0 3.48e-01 90.6% 68.9%
3980189 7525.1.1.1 a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_1 0.51 44.0 3.84e-01 100.0% 69.0%
5025081 232.1.1.2 a+b duplicates or obligate multimers › Pentein › Pentein › Pentein › ADI 0.50 45.0 2.98e-01 100.0% 72.7%
4977517 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.50 32.0 3.54e-01 93.8% 82.7%
5078695 7525.1.1.1 a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_1 0.50 44.0 3.84e-01 100.0% 68.8%
D3 medium residues 1-86
PDB
D4 medium residues 137-258
PDB
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3zppA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.88 82.0 5.42e-01 97.5% 35.6%
3gq8A01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.87 82.0 5.37e-01 100.0% 29.7%
2pygA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.87 80.0 5.46e-01 96.7% 38.5%
2uvfB02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.87 81.0 5.30e-01 98.4% 43.9%
1h80B00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.86 80.0 5.32e-01 98.4% 31.2%
7chuA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.84 79.0 5.48e-01 100.0% 38.6%
3jurA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.84 78.0 5.11e-01 98.4% 41.9%
3eqnA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.82 76.0 5.31e-01 99.2% 37.6%
1rmgA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.82 75.0 5.06e-01 98.4% 31.0%
2x3hA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.82 74.0 4.80e-01 100.0% 23.7%
2vbkA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.80 75.0 4.83e-01 100.0% 27.4%
4oj6C03 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.80 73.0 4.95e-01 96.7% 45.5%
3bh7B01 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.75 52.0 4.38e-01 97.5% 44.6%
1k8fA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.73 53.0 4.84e-01 98.4% 58.0%
1qjvA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.73 67.0 4.75e-01 98.4% 43.9%
3vmvA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.72 67.0 4.83e-01 100.0% 48.5%
1idjA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.68 63.0 4.45e-01 100.0% 59.9%
5jlvC00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.67 47.0 5.16e-01 91.0% 91.8%
2b0rB00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.66 48.0 4.44e-01 100.0% 58.9%
1hg8A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.66 59.0 4.27e-01 100.0% 52.7%
1bheA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.65 60.0 4.21e-01 100.0% 63.3%
8tmsA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.65 58.0 4.48e-01 100.0% 81.1%
1k4zA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.59 49.0 4.56e-01 100.0% 70.1%
1hf2A02 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.54 42.0 4.46e-01 93.4% 95.3%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3987209 207.2.1.21 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3,Beta_helix 0.87 82.0 5.34e-01 100.0% 32.4%
4355788 207.2.1.76 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Pect-lyase_RHGA_epim, Beta_helix 0.87 79.0 4.93e-01 95.9% 25.2%
5003179 207.2.1.121 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Disaggr_assoc 0.87 81.0 5.42e-01 98.4% 33.8%
4424225 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.86 80.0 5.26e-01 98.4% 30.0%
4855553 207.2.1.94 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Pect-lyase_RHGA_epim 0.86 80.0 5.67e-01 98.4% 43.4%
397790 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.86 80.0 5.25e-01 98.4% 30.0%
3326988 207.2.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28,Pectate_lyase_3 0.86 80.0 5.26e-01 98.4% 35.1%
4446517 207.2.1.21 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3,Beta_helix 0.85 79.0 5.40e-01 98.4% 37.9%
4961398 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.85 80.0 5.07e-01 99.2% 34.4%
3195366 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.83 78.0 5.33e-01 100.0% 35.6%
4989937 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.83 62.0 5.04e-01 97.5% 44.8%
2491350 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.83 78.0 5.43e-01 100.0% 40.0%
3674708 207.2.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28,Pectate_lyase_3 0.83 77.0 5.27e-01 99.2% 37.9%
2701717 207.2.1.20 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 0.82 77.0 5.22e-01 99.2% 31.0%
3307012 207.2.2.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › beta-helix domain of fiber adhesin › Glyco_hydro_28 0.82 77.0 6.89e-01 98.4% 88.7%
4522677 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.82 76.0 5.04e-01 98.4% 30.7%
4079489 207.2.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28,Pectate_lyase_3 0.82 76.0 5.04e-01 98.4% 30.7%
4980606 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.80 65.0 5.77e-01 95.9% 61.2%
3385173 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.79 74.0 5.21e-01 99.2% 45.7%
5043031 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.76 68.0 5.04e-01 95.1% 54.5%
5034971 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.75 68.0 5.37e-01 97.5% 50.9%
4969187 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.74 65.0 5.21e-01 100.0% 49.6%
4202478 207.2.1.3 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 0.73 68.0 4.91e-01 99.2% 50.2%
3428231 207.2.1.4 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectinesterase 0.73 68.0 4.80e-01 100.0% 42.6%
3335697 207.2.1.3 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 0.73 67.0 4.82e-01 98.4% 48.1%
3680585 207.2.1.3 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 0.72 67.0 5.24e-01 98.4% 64.7%
5050079 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.71 61.0 4.82e-01 100.0% 47.2%
4970371 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.70 64.0 4.76e-01 100.0% 60.7%
2547953 207.2.1.33 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pel9A-like_beta_helix 0.69 63.0 4.69e-01 100.0% 62.4%
3251722 207.2.1.62 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › G8+CEMIP_beta-hel 0.68 62.0 3.90e-01 100.0% 27.8%
3455716 207.2.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28,Pectate_lyase_3 0.68 63.0 4.44e-01 100.0% 57.1%
3324632 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.67 58.0 4.64e-01 97.5% 48.3%
5062821 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.67 60.0 4.02e-01 98.4% 26.6%
1758793 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.66 61.0 4.85e-01 100.0% 52.1%
5022137 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.64 58.0 4.45e-01 100.0% 59.3%
3273919 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.62 57.0 4.22e-01 100.0% 51.7%
3941286 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.61 56.0 4.43e-01 100.0% 63.3%
4481179 207.1.1.58 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRRCT,LRR_8 0.57 50.0 3.49e-01 99.2% 40.2%
4863578 207.1.1.185 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_6 0.56 49.0 4.37e-01 100.0% 68.8%
4643528 208.2.1.11 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › Ice_nucleation 0.52 42.0 4.42e-01 100.0% 96.4%
D5 medium residues 259-353
PDB
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4nk6A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.90 69.0 4.30e-01 100.0% 17.7%
3vsvA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.83 68.0 4.17e-01 100.0% 16.1%
2x3hA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.79 72.0 4.38e-01 100.0% 18.3%
1vblA00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.78 73.0 4.65e-01 100.0% 28.4%
2vjiA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.77 72.0 4.55e-01 100.0% 25.2%
7chuA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.76 71.0 4.64e-01 100.0% 27.2%
7b7aA01 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.72 67.0 4.37e-01 100.0% 26.6%
2uvfB02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.71 67.0 4.17e-01 100.0% 26.4%
1k4zA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.69 46.0 3.93e-01 100.0% 41.4%
3eqnA02 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.69 63.0 4.18e-01 100.0% 32.9%
2b0rB00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.69 46.0 3.93e-01 100.0% 41.8%
1k8fA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.69 46.0 3.90e-01 100.0% 41.4%
3riqA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.66 59.0 3.65e-01 100.0% 17.2%
4i84A00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.61 55.0 3.89e-01 100.0% 36.8%
3i2tA01 3.80.20.20 Alpha Beta › Alpha-Beta Horseshoe › 24 nucleotide stem-loop, u2 snrnp hairpin iv. U2 a'; Chain A › Receptor L-domain 0.58 52.0 4.22e-01 100.0% 63.9%
1igrA01 3.80.20.20 Alpha Beta › Alpha-Beta Horseshoe › 24 nucleotide stem-loop, u2 snrnp hairpin iv. U2 a'; Chain A › Receptor L-domain 0.57 50.0 4.07e-01 100.0% 59.8%
5jlvC00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.53 46.0 4.63e-01 100.0% 93.8%
1pyoC00 3.40.50.1460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 41.0 3.47e-01 85.3% 77.0%
3petA00 2.160.20.120 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.52 46.0 3.52e-01 97.9% 68.8%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5067457 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.91 73.0 4.58e-01 100.0% 18.8%
5034576 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.91 66.0 4.67e-01 100.0% 28.4%
5034451 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.90 67.0 4.71e-01 100.0% 28.1%
4981813 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.90 67.0 4.58e-01 100.0% 25.2%
5034986 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.89 66.0 4.96e-01 100.0% 35.6%
5080460 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.89 67.0 3.95e-01 100.0% 12.1%
5019579 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.88 66.0 3.85e-01 100.0% 11.3%
3429156 207.2.1.3 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 0.85 65.0 4.34e-01 100.0% 22.7%
5058714 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.81 67.0 4.43e-01 100.0% 23.7%
1725727 207.2.1.27 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Phage_spike_2 0.77 72.0 4.41e-01 100.0% 21.0%
5068819 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.76 56.0 3.85e-01 100.0% 23.1%
3274687 207.2.1.73 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › PF29740 0.76 59.0 4.52e-01 100.0% 38.0%
None 0.74 68.0 4.49e-01 100.0% 27.5%
4972655 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.74 70.0 4.44e-01 100.0% 23.5%
3194802 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.72 68.0 4.33e-01 100.0% 23.7%
5060098 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.71 68.0 4.61e-01 100.0% 40.7%
4952564 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.71 67.0 4.42e-01 100.0% 30.7%
3261233 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.70 64.0 3.98e-01 100.0% 21.7%
4025775 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.68 41.0 3.92e-01 100.0% 49.6%
3446054 207.1.1.47 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRR_6 0.66 49.0 3.96e-01 100.0% 41.1%
3335252 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.66 60.0 4.70e-01 100.0% 49.2%
3454345 207.1.1.95 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 0.64 49.0 4.62e-01 100.0% 66.7%
3273051 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.60 54.0 3.90e-01 100.0% 35.9%
3607554 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.59 52.0 3.45e-01 100.0% 24.1%
5039321 207.8.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.58 52.0 3.38e-01 100.0% 35.2%
3708794 207.4.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C 0.58 48.0 3.94e-01 100.0% 49.7%
4634184 207.8.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.58 52.0 3.68e-01 100.0% 34.6%
5058805 207.8.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.58 51.0 3.33e-01 100.0% 22.7%
3979669 207.8.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD,SufBD_N 0.58 51.0 3.29e-01 100.0% 21.7%
4028692 207.8.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.57 50.0 3.29e-01 100.0% 22.2%
3711105 208.7.1.6 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Grass antifreeze protein › Grass antifreeze protein › Nucleoporin_FG 0.57 35.0 3.03e-01 95.8% 39.3%
4963653 207.8.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.57 50.0 3.27e-01 100.0% 33.3%
3414694 207.6.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C 0.57 50.0 2.96e-01 100.0% 13.4%
4196233 207.8.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD,SufBD_N 0.56 50.0 3.26e-01 100.0% 27.2%
3620857 207.1.1.141 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_5, LRR_8 0.56 52.0 3.67e-01 100.0% 35.6%
3201342 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.56 50.0 4.42e-01 100.0% 75.0%
4976134 207.8.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.56 49.0 3.46e-01 100.0% 30.2%
4029692 207.8.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.56 48.0 3.36e-01 100.0% 28.4%
3206069 208.1.1.0 beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes 0.54 49.0 4.52e-01 100.0% 88.3%
3726637 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.52 46.0 3.09e-01 96.8% 26.3%
2777343 2003.1.2.30 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_3 0.50 32.0 3.18e-01 97.9% 59.8%
D6 medium residues 354-440
PDB
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4mxnB00 2.160.20.10 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like 0.83 64.0 4.56e-01 100.0% 31.0%
1k4zA00 2.160.20.70 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.72 49.0 3.99e-01 97.7% 38.9%
2j8iA01 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.63 43.0 4.16e-01 98.9% 60.8%
2xt2B00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.63 46.0 3.57e-01 97.7% 34.5%
5jlvC00 2.160.20.80 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA 0.56 47.0 4.55e-01 100.0% 82.5%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5045582 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.91 69.0 4.28e-01 100.0% 16.6%
4981825 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.90 70.0 4.77e-01 100.0% 26.4%
3873508 207.2.1.70 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Beta_helix 0.90 68.0 4.06e-01 100.0% 13.6%
4940415 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.89 67.0 4.46e-01 100.0% 23.1%
4944636 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.88 69.0 4.56e-01 100.0% 22.9%
4944828 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.88 67.0 4.62e-01 97.7% 26.5%
5060991 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.88 66.0 4.25e-01 100.0% 19.4%
4945679 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.87 69.0 4.69e-01 100.0% 26.7%
5035926 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.86 66.0 4.12e-01 100.0% 16.9%
3668060 207.2.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 0.84 67.0 4.65e-01 100.0% 28.8%
4202478 207.2.1.3 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 0.79 66.0 4.37e-01 100.0% 24.4%
3291881 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.78 63.0 4.23e-01 98.9% 24.7%
5039544 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.73 68.0 4.85e-01 100.0% 42.6%
5022134 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.73 67.0 4.41e-01 97.7% 30.3%
5050408 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.72 68.0 4.21e-01 100.0% 22.1%
None 0.72 66.0 4.36e-01 100.0% 29.3%
None 0.72 66.0 4.22e-01 100.0% 25.1%
3374610 207.2.1.3 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 0.72 66.0 4.78e-01 100.0% 42.5%
3539089 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.71 67.0 4.67e-01 100.0% 37.2%
5048503 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.71 68.0 3.95e-01 100.0% 15.1%
4003464 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.71 66.0 4.27e-01 100.0% 31.1%
4944812 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.70 66.0 4.81e-01 100.0% 42.9%
5032703 207.14.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin 0.69 43.0 3.91e-01 98.9% 47.0%
3575994 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.69 48.0 5.11e-01 98.9% 84.0%
5041137 207.14.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A 0.68 43.0 4.70e-01 98.9% 78.6%
3437206 207.2.2.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › beta-helix domain of fiber adhesin › Glyco_hydro_28 0.68 60.0 5.76e-01 96.6% 91.9%
4308074 207.9.1.6 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide, Pentapeptide_4 0.67 46.0 3.52e-01 98.9% 30.2%
3278252 207.9.1.6 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide, Pentapeptide_4 0.67 47.0 3.54e-01 100.0% 30.7%
3482918 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.67 60.0 3.90e-01 100.0% 26.8%
5033358 207.2.1.13 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD 0.67 63.0 4.17e-01 100.0% 30.7%
4970433 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.67 62.0 4.16e-01 100.0% 29.7%
3923083 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.66 61.0 4.44e-01 100.0% 41.4%
3263729 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.65 59.0 3.97e-01 100.0% 40.6%
3254555 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.65 60.0 4.13e-01 100.0% 33.8%
3592449 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.64 59.0 3.97e-01 100.0% 30.5%
3708824 207.2.1.22 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix 0.64 58.0 3.95e-01 100.0% 30.4%
3264625 207.2.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like 0.63 39.0 3.04e-01 93.1% 27.9%
4969960 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.62 45.0 4.45e-01 100.0% 71.6%
3883354 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.61 41.0 3.63e-01 100.0% 46.5%
4937812 207.8.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD 0.54 48.0 3.21e-01 100.0% 32.7%
3621708 207.9.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats 0.52 47.0 3.69e-01 100.0% 55.1%
D7 medium residues 551-750
PDB