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LC776701.1__BEQ12906.1__Ep4_047__00047
Bact-VirLC776701.1__BEQ12906.1__Ep4_047__00047
Identity
- Accession:
- LC776701 ↗
- Kingdom:
- phage
Quality
81.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autoscriptoviridae›
Actinidiaevirus›
Pseudomonas_phage_Ep4
TaxID: 3057492
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 12-93
Domain cluster:
rep: MT783706.1__QNO11468.1__Aristophanes_00044__00044__D9-99
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11123.15 best | DNA_Packaging_2 | 66.9 | 1.90e-18 | 100.0% | 90.0% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3wozB00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.63 | 49.0 | 3.63e-01 | 86.6% | 83.4% |
| 1ak2A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 44.0 | 3.17e-01 | 74.4% | 48.2% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4605138 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.69 | 52.0 | 4.65e-01 | 80.5% | 69.6% |
| 4396754 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.68 | 48.0 | 4.34e-01 | 74.4% | 67.0% |
| 4343661 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.68 | 51.0 | 4.59e-01 | 80.5% | 70.2% |
| 4075001 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.64 | 46.0 | 4.17e-01 | 75.6% | 67.3% |
| 4066056 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.63 | 46.0 | 4.18e-01 | 79.3% | 70.4% |
| 3443425 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.58 | 41.0 | 3.20e-01 | 73.2% | 81.6% |
| 4124492 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.58 | 44.0 | 3.97e-01 | 82.9% | 73.9% |
| 4137277 | 4336.1.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › Com_YlbF | 0.57 | 43.0 | 3.93e-01 | 82.9% | 73.0% |
| 3942444 | 5058.1.1.4 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › COX4_pro | 0.54 | 40.0 | 3.96e-01 | 80.5% | 100.0% |