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LC779549.1__BET03770.1__X__00039
Bact-VirLC779549.1__BET03770.1__X__00039
Identity
- Accession:
- LC779549 ↗
- Kingdom:
- phage
Quality
55.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autonotataviridae›
Cronosvirus›
Cronobacter_phage_GY3
TaxID: 3075035
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 77-165
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.61 | 49.0 | 4.32e-01 | 100.0% | 59.5% |
| 2do3A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 34.0 | 4.32e-01 | 70.8% | 100.0% |
| 2p1gA02 | 2.30.260.10 | Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain | 0.57 | 46.0 | 4.46e-01 | 88.8% | 81.0% |
| 7afrX02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.55 | 35.0 | 4.14e-01 | 78.7% | 96.7% |
| 2e70A00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 36.0 | 3.91e-01 | 71.9% | 83.1% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 36.0 | 3.99e-01 | 79.8% | 90.9% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 34.0 | 3.94e-01 | 78.7% | 89.2% |
| 7mhwA01 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 37.0 | 3.72e-01 | 73.0% | 94.4% |
| 2wdtC02 | 3.30.1490.420 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 | 0.52 | 41.0 | 4.00e-01 | 87.6% | 92.1% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.51 | 36.0 | 3.86e-01 | 75.3% | 90.7% |
| 2dk7A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.50 | 31.0 | 3.37e-01 | 75.3% | 75.3% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5013892 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 39.0 | 4.76e-01 | 77.5% | 100.0% |
| 5044373 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 40.0 | 4.59e-01 | 84.3% | 95.0% |
| 5023740 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 35.0 | 4.41e-01 | 79.8% | 100.0% |
| 5056706 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 35.0 | 4.38e-01 | 79.8% | 98.0% |
| 3290662 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.59 | 44.0 | 3.91e-01 | 89.9% | 53.8% |
| 3624687 | 64.1.1.9 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW_TCERG1 | 0.58 | 32.0 | 4.05e-01 | 73.0% | 96.0% |
| 3274582 | 4.1.1.365 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_KIN17_C | 0.56 | 34.0 | 4.14e-01 | 71.9% | 98.2% |
| 3358753 | 4.1.1.381 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5, KOW4_SPT5 | 0.56 | 35.0 | 2.82e-01 | 75.3% | 33.3% |
| 4478971 | 4.1.1.174 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF951 | 0.56 | 37.0 | 4.19e-01 | 84.3% | 93.8% |
| 3483289 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 38.0 | 4.36e-01 | 83.1% | 98.5% |
| 4011825 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.55 | 41.0 | 3.11e-01 | 79.8% | 71.1% |
| 3464671 | 4.1.1.136 ↗ | beta barrels › SH3 › SH3 › SH3 › NMD_SH3 | 0.55 | 39.0 | 4.34e-01 | 84.3% | 95.7% |
| 2028019 | 4.1.1.136 ↗ | beta barrels › SH3 › SH3 › SH3 › NMD_SH3 | 0.55 | 38.0 | 4.28e-01 | 84.3% | 98.5% |
| 3691730 | 6.1.1.37 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › DUF7908 | 0.54 | 41.0 | 3.69e-01 | 84.3% | 100.0% |
| 4505316 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 36.0 | 4.16e-01 | 83.1% | 100.0% |
| 3984091 | 3180.1.1.1 ↗ | a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › EspG | 0.54 | 35.0 | 3.39e-01 | 74.2% | 57.1% |
| 4201840 | 331.1.1.6 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 | 0.54 | 29.0 | 3.06e-01 | 88.8% | 56.2% |
| 3821398 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.54 | 38.0 | 2.72e-01 | 76.4% | 92.1% |
| 5032782 | 9.23.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 | 0.54 | 37.0 | 3.77e-01 | 73.0% | 94.4% |
| 3938259 | 3257.1.1.1 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N | 0.54 | 44.0 | 3.63e-01 | 91.0% | 93.9% |
| 3492757 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 37.0 | 4.11e-01 | 79.8% | 92.9% |
| 3890750 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 38.0 | 3.83e-01 | 75.3% | 86.7% |
| 3903484 | 220.1.1.64 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C1_MyoVII | 0.53 | 38.0 | 3.57e-01 | 76.4% | 70.0% |
| 3407060 | 3257.1.1.1 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N | 0.52 | 42.0 | 3.44e-01 | 87.6% | 99.4% |
| 5033737 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.52 | 45.0 | 3.55e-01 | 95.5% | 89.9% |
| 3235400 | 220.1.1.132 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C | 0.52 | 38.0 | 3.81e-01 | 76.4% | 85.4% |
| 3556708 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.52 | 30.0 | 3.26e-01 | 86.5% | 68.0% |
| 3899940 | 331.4.1.9 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C | 0.52 | 30.0 | 3.19e-01 | 86.5% | 63.7% |
| 3623430 | 3257.1.1.1 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N | 0.52 | 41.0 | 3.43e-01 | 87.6% | 98.1% |
| 3621133 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 39.0 | 2.72e-01 | 80.9% | 94.2% |
| 5083781 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.50 | 42.0 | 3.42e-01 | 92.1% | 88.2% |
| 3786743 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.50 | 36.0 | 2.63e-01 | 76.4% | 75.8% |
D2
medium
residues 1-73