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LC788707.1__BEU75916.1__AZ23E_0020__00001

Bact-Vir

LC788707.1__BEU75916.1__AZ23E_0020__00001

Identity

Accession:
LC788707 ↗
Kingdom:
phage

Quality

93.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Demerecviridae› Tequintavirus› Escherichia_coli_phage_AZ23

TaxID: 3092522

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-87
PDB
Domain cluster: rep: HM208537.1__ADO67758.1__HK639_75__00075__D5-84
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1l3iA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 42.0 3.34e-01 86.0% 31.9%
6ruiC01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.61 52.0 4.32e-01 98.8% 77.6%
1v8cA02 3.30.1370.80 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain 0.61 50.0 5.21e-01 98.8% 96.2%
1yb2A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 43.0 3.19e-01 89.5% 28.7%
3pfeA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 53.0 4.54e-01 100.0% 92.3%
2yxdA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 43.0 3.44e-01 87.2% 86.6%
6tmfM00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.54 49.0 4.64e-01 100.0% 91.2%
3gb0A02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 50.0 4.54e-01 100.0% 89.3%
5mmjj00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.54 49.0 4.66e-01 100.0% 93.9%
2ii3A01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.54 48.0 3.57e-01 100.0% 87.1%
4hvzA02 3.30.70.2970 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function (DUF541), domain 2 0.53 48.0 4.37e-01 100.0% 87.5%
3ttyA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 30.0 3.46e-01 86.0% 77.4%
2xzmJ00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.52 46.0 4.34e-01 100.0% 89.5%
7r5mA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.52 45.0 3.39e-01 100.0% 87.4%
5aj3F00 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.51 45.0 4.04e-01 100.0% 69.1%
1dzlA00 2.60.175.20 Mainly Beta › Sandwich › Polyomavirus Vp1; Chain A › Major capsid L1 (late) superfamily, Papillomavirus 0.51 43.0 2.81e-01 98.8% 89.9%
2rb7A02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 46.0 4.26e-01 100.0% 92.5%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
6344 331.6.1.1 ↗ a+b two layers › TBP-like › MoaD-related protein, C-terminal domain › MoaD-related protein, C-terminal domain › DUF1952 0.61 48.0 5.01e-01 100.0% 97.4%
3244545 304.109.1.1 ↗ a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 0.58 45.0 3.75e-01 90.7% 47.4%
5024288 305.1.1.2 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 0.57 45.0 4.25e-01 95.3% 70.5%
3953553 304.133.1.1 ↗ a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL 0.55 51.0 4.73e-01 100.0% 94.3%
4027660 304.44.1.0 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 0.54 49.0 4.64e-01 100.0% 95.2%
4584621 304.44.1.1 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 0.54 49.0 4.68e-01 100.0% 93.0%
4322566 304.44.1.1 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 0.54 49.0 4.77e-01 100.0% 96.8%
2705771 3382.1.1.1 ↗ alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt 0.54 42.0 3.02e-01 86.0% 69.8%
5041672 304.44.1.1 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 0.54 48.0 4.58e-01 100.0% 89.3%
5057906 304.44.1.1 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 0.53 48.0 4.54e-01 100.0% 92.4%
3673973 304.12.1.1 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.53 48.0 4.37e-01 100.0% 80.0%
3667518 328.1.1.1 ↗ a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba 0.53 38.0 3.64e-01 88.4% 62.9%
3024932 304.44.1.1 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 0.53 47.0 4.42e-01 100.0% 85.0%
4234820 304.109.1.1 ↗ a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 0.52 39.0 3.77e-01 98.8% 70.0%
1577174 304.25.1.1 ↗ a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer 0.52 46.0 3.69e-01 100.0% 92.1%
4026188 323.1.1.1 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › 2-oxoacid_dh 0.52 45.0 3.31e-01 100.0% 81.5%
5052711 304.55.2.0 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like 0.52 45.0 3.89e-01 100.0% 81.4%
5050142 304.25.1.0 ↗ a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain 0.52 45.0 3.91e-01 100.0% 93.6%
4992378 304.133.1.1 ↗ a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL 0.52 44.0 4.02e-01 97.7% 78.3%
3909924 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.51 39.0 3.44e-01 83.7% 82.2%
2755624 304.44.1.1 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 0.51 45.0 3.73e-01 100.0% 60.6%