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LC788707.1__BEU75981.1__AZ23E_0670__00066

Bact-Vir

LC788707.1__BEU75981.1__AZ23E_0670__00066

Identity

Accession:
LC788707 ↗
Kingdom:
phage

Quality

78.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Demerecviridae› Tequintavirus› Escherichia_coli_phage_AZ23

TaxID: 3092522

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-62
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dn0A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 48.0 4.55e-01 100.0% 61.8%
3tl4X02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.66 53.0 5.07e-01 100.0% 77.8%
4fqgB03 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.64 56.0 5.53e-01 100.0% 93.9%
3e3vA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 47.0 4.83e-01 96.7% 87.5%
4hteA03 1.10.167.30 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › 0.61 35.0 3.20e-01 98.4% 43.8%
2q0iA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.61 53.0 3.42e-01 100.0% 38.3%
1tt5B02 1.10.10.520 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 0.60 52.0 4.87e-01 100.0% 80.5%
1vw4801 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.58 46.0 4.39e-01 93.4% 76.7%
2qsbA00 1.20.1440.50 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like 0.57 41.0 3.71e-01 88.5% 55.3%
1h97A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.57 45.0 3.47e-01 88.5% 78.2%
3mvcB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.57 47.0 3.68e-01 100.0% 84.4%
1mhyG02 1.20.1280.30 Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2 0.56 42.0 4.00e-01 95.1% 67.1%
2hszA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.56 46.0 4.34e-01 100.0% 77.3%
1wvuB02 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.55 47.0 3.28e-01 95.1% 95.4%
4w4kA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.55 38.0 3.43e-01 72.1% 65.9%
1u84A00 1.10.340.20 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain 0.54 45.0 4.20e-01 100.0% 85.2%
1or4B00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.54 44.0 3.44e-01 100.0% 79.1%
3c4rA00 1.10.3600.10 Mainly Alpha › Orthogonal Bundle › uncharacterized protein encoded by cryptic prophage fold › Putative bacterial toxin ydaT 0.54 40.0 3.32e-01 85.2% 50.0%
1a41A02 1.20.120.380 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 0.54 44.0 4.00e-01 100.0% 79.8%
3s6jE02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.53 41.0 4.00e-01 100.0% 79.7%
4r8zA00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.52 42.0 3.03e-01 100.0% 82.1%
3vayA02 1.20.120.1600 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.51 43.0 3.92e-01 100.0% 88.5%
1dd9A03 1.20.50.20 Mainly Alpha › Up-down Bundle › Pheromone ER-1 › DnaG, RNA polymerase domain, helical bundle 0.50 36.0 3.71e-01 93.4% 86.4%
2wh5A00 1.20.80.10 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.50 36.0 3.27e-01 78.7% 81.1%
ECOD (28)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3915655 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.67 52.0 5.07e-01 100.0% 75.7%
3169408 101.1.17.2 ↗ alpha arrays › HTH › HTH › FF domain › FF 0.67 53.0 5.14e-01 100.0% 78.6%
3216384 197.1.1.0 ↗ alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like 0.66 58.0 4.61e-01 100.0% 53.6%
3627903 5.1.11.23 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_HPS5 0.65 39.0 2.28e-01 100.0% 7.6%
3935700 101.1.17.2 ↗ alpha arrays › HTH › HTH › FF domain › FF 0.64 51.0 5.08e-01 100.0% 84.6%
3723084 101.1.17.0 ↗ alpha arrays › HTH › HTH › FF domain 0.64 55.0 5.35e-01 100.0% 88.6%
3224656 101.1.1.102 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Lin-8 0.64 51.0 4.29e-01 100.0% 50.9%
3722031 3985.1.1.1 ↗ alpha bundles › CFEM domain (contains eight cysteines) › CFEM domain (contains eight cysteines) › CFEM domain (contains eight cysteines) › CFEM 0.63 53.0 5.02e-01 100.0% 92.0%
4626177 101.32.1.0 ↗ alpha arrays › HTH › bacterioferritin-associated ferredoxin › bacterioferritin-associated ferredoxin 0.62 54.0 4.98e-01 100.0% 77.5%
3448333 101.1.1.121 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.61 49.0 4.61e-01 100.0% 71.2%
3399185 101.1.17.2 ↗ alpha arrays › HTH › HTH › FF domain › FF 0.61 48.0 4.01e-01 100.0% 47.8%
3419597 101.1.1.121 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.60 49.0 3.99e-01 100.0% 46.4%
2488795 2005.1.1.7 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d 0.59 42.0 2.77e-01 75.4% 20.4%
3334694 101.1.1.121 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.59 48.0 4.37e-01 100.0% 67.1%
3426912 101.1.1.121 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.59 47.0 4.39e-01 100.0% 71.2%
3623190 174.1.1.31 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF7027 0.58 51.0 3.74e-01 98.4% 86.3%
3291596 150.5.1.52 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PE 0.57 39.0 3.31e-01 72.1% 53.0%
3880529 130.1.1.0 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif 0.57 49.0 4.82e-01 100.0% 95.4%
3442922 101.1.1.121 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.56 45.0 4.27e-01 100.0% 76.0%
3806393 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.56 43.0 4.33e-01 100.0% 87.7%
1293726 150.7.1.1 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PE › PE › PE 0.55 38.0 3.40e-01 72.1% 63.5%
3277932 150.5.1.52 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PE 0.54 38.0 3.37e-01 73.8% 83.3%
3609084 102.1.1.95 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DUF7578 0.54 43.0 3.46e-01 100.0% 40.7%
3568558 130.1.1.0 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif 0.53 45.0 4.56e-01 96.7% 100.0%
3999359 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.52 39.0 3.14e-01 80.3% 44.0%
3230678 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.52 43.0 3.29e-01 100.0% 84.2%
4939406 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 43.0 3.17e-01 100.0% 34.3%
4956455 4163.1.2.0 ↗ alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like 0.51 34.0 2.95e-01 100.0% 43.0%