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LD_Run2_08_scaffold_35_prodigal-single.1__X__X__00162
Bact-VirLD_Run2_08_scaffold_35_prodigal-single.1__X__X__00162
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-147
Domain cluster:
rep: IMGVR_UViG_7000000171_000112-7000000171-SRS052697_LANL_scaffold_75554__gene_171382__D9-163
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3wwxA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 42.0 | 3.20e-01 | 80.6% | 69.4% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4943784 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 58.0 | 6.25e-01 | 75.7% | 100.0% |
| 3964088 | 101.1.2.269 ↗ | alpha arrays › HTH › HTH › winged helix domain › SocA_Panacea | 0.79 | 74.0 | 6.78e-01 | 98.6% | 89.4% |
| 4940657 | 101.1.2.269 ↗ | alpha arrays › HTH › HTH › winged helix domain › SocA_Panacea | 0.79 | 75.0 | 7.15e-01 | 100.0% | 92.7% |
| 5025462 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.77 | 61.0 | 6.35e-01 | 83.3% | 97.8% |
| 4996617 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 61.0 | 6.41e-01 | 94.4% | 99.2% |
| 5005264 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 62.0 | 5.88e-01 | 100.0% | 99.4% |
| 3187484 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 39.0 | 3.34e-01 | 99.3% | 44.0% |
| 3229725 | 4019.1.1.1 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.53 | 41.0 | 3.19e-01 | 81.2% | 63.9% |