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LD_Run2_08_scaffold_35_prodigal-single.1__X__X__00216
Bact-VirLD_Run2_08_scaffold_35_prodigal-single.1__X__X__00216
Identity
- Kingdom:
- phage
Quality
68.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 7-85
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tafB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.65 | 47.0 | 4.94e-01 | 94.9% | 85.7% |
| 1y4oA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.59 | 33.0 | 3.03e-01 | 83.5% | 38.5% |
| 4gzcA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 32.0 | 2.71e-01 | 84.8% | 31.8% |
| 3psfA02 | 1.10.10.650 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RuvA domain 2-like | 0.57 | 47.0 | 3.93e-01 | 93.7% | 91.0% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3748755 | 5054.1.1.63 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, YVC1_C | 0.67 | 49.0 | 3.16e-01 | 75.9% | 37.7% |
| 4944343 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.66 | 37.0 | 3.46e-01 | 81.0% | 45.7% |
| 3622749 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.63 | 46.0 | 3.09e-01 | 77.2% | 42.3% |
| 4002901 | 223.2.1.12 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int | 0.63 | 33.0 | 2.75e-01 | 100.0% | 27.9% |
| 5073565 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 32.0 | 3.09e-01 | 84.8% | 42.2% |
| 5028212 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.61 | 42.0 | 3.40e-01 | 88.6% | 37.8% |
| 5028765 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.61 | 42.0 | 3.36e-01 | 89.9% | 37.3% |
| 1141882 | 4099.1.1.3 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spc24 | 0.61 | 36.0 | 3.68e-01 | 81.0% | 61.8% |
| 4928263 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 35.0 | 3.12e-01 | 84.8% | 40.9% |
| 3194649 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.58 | 51.0 | 3.08e-01 | 100.0% | 24.1% |
| 3203216 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.58 | 38.0 | 3.10e-01 | 74.7% | 38.1% |
| 3503335 | 604.1.1.124 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_6 | 0.57 | 46.0 | 4.08e-01 | 91.1% | 60.0% |
| 4258578 | 604.14.1.1 ↗ | alpha bundles › Spectrin repeat-like › PPK N-terminal domain-like › PPK N-terminal domain-like › PP_kinase_N | 0.55 | 40.0 | 3.63e-01 | 83.5% | 57.1% |
| 3269320 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.55 | 48.0 | 4.06e-01 | 100.0% | 91.9% |
| 4992192 | 192.20.1.0 ↗ | alpha bundles › Long alpha-hairpin › helical hairpin domain in transcriptional anti-activator ExsD › helical hairpin domain in transcriptional anti-activator ExsD | 0.53 | 45.0 | 4.28e-01 | 96.2% | 77.9% |
| 3607162 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 39.0 | 3.15e-01 | 82.3% | 88.9% |