←Back to structures
LD_Run2_13_scaffold_0_prodigal-single.1__X__X__00007
Bact-VirLD_Run2_13_scaffold_0_prodigal-single.1__X__X__00007
Identity
- Kingdom:
- phage
Quality
51.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 168-277
Domain cluster:
rep: pig_ID_3640_F65_scaffold_23_curated_prodigal-single.1__X__X__00162__D37-134
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2el8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.65 | 41.0 | 4.46e-01 | 82.7% | 75.8% |
| 2kouA00 | 3.30.160.380 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Dicer dimerisation domain | 0.60 | 43.0 | 4.52e-01 | 98.2% | 81.4% |
| 5c0pA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 53.0 | 3.96e-01 | 100.0% | 94.0% |
| 6nu7A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 49.0 | 3.50e-01 | 92.7% | 64.6% |
| 4h63Q04 | 3.90.1150.120 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.57 | 44.0 | 4.40e-01 | 95.5% | 77.6% |
| 6c1zA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 37.0 | 3.45e-01 | 73.6% | 55.1% |
| 4qunA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.54 | 49.0 | 3.61e-01 | 98.2% | 77.0% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 36.0 | 3.34e-01 | 77.3% | 54.0% |
| 3hdjA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.53 | 47.0 | 4.35e-01 | 100.0% | 89.3% |
| 1e5tA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.51 | 45.0 | 3.19e-01 | 100.0% | 95.8% |
| 1l3aA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.51 | 40.0 | 3.48e-01 | 83.6% | 74.7% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3737401 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.65 | 49.0 | 5.42e-01 | 83.6% | 97.8% |
| 4955671 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.64 | 44.0 | 5.04e-01 | 74.5% | 97.5% |
| 5079230 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.63 | 49.0 | 5.08e-01 | 92.7% | 88.6% |
| 3484248 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.62 | 44.0 | 4.35e-01 | 75.5% | 92.5% |
| 3275248 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.61 | 48.0 | 4.66e-01 | 96.4% | 75.8% |
| 3791220 | 4210.1.1.1 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › WGR | 0.61 | 45.0 | 4.35e-01 | 77.3% | 90.3% |
| 3272624 | 4210.1.1.1 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › WGR | 0.61 | 45.0 | 4.31e-01 | 78.2% | 92.3% |
| 3676182 | 5.1.2.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_32N | 0.60 | 51.0 | 3.56e-01 | 93.6% | 65.2% |
| 3412971 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.59 | 48.0 | 4.85e-01 | 91.8% | 86.4% |
| 3849839 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.59 | 44.0 | 4.58e-01 | 77.3% | 88.0% |
| 4028916 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.59 | 41.0 | 4.14e-01 | 71.8% | 93.6% |
| 3266323 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.59 | 47.0 | 4.57e-01 | 84.5% | 100.0% |
| 1147819 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.58 | 44.0 | 4.66e-01 | 90.0% | 89.9% |
| 3706858 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.57 | 48.0 | 4.57e-01 | 93.6% | 90.4% |
| 3569064 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.56 | 41.0 | 2.67e-01 | 77.3% | 34.9% |
| 3177251 | 216.1.1.41 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › PF29959 | 0.56 | 46.0 | 4.20e-01 | 94.5% | 65.8% |
| 3467074 | 247.1.1.27 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › DUF4336 | 0.53 | 43.0 | 3.16e-01 | 89.1% | 90.8% |
| 3395788 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 37.0 | 3.65e-01 | 70.9% | 79.7% |
| 3939966 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.53 | 36.0 | 3.66e-01 | 70.9% | 83.6% |
| 4221174 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.52 | 36.0 | 3.78e-01 | 70.0% | 98.9% |
| 3599391 | 868.1.1.2 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase | 0.52 | 45.0 | 3.69e-01 | 99.1% | 98.2% |
| 1710650 | 3692.1.1.0 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain | 0.51 | 38.0 | 3.97e-01 | 85.5% | 85.3% |
| 3421020 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 42.0 | 3.41e-01 | 92.7% | 63.6% |
D2
medium
residues 3-109