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LD_Run2_13_scaffold_0_prodigal-single.1__X__X__00045
Bact-VirLD_Run2_13_scaffold_0_prodigal-single.1__X__X__00045
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 58-209
Domain cluster:
rep: OQ508957.1__WGH49903.1__X__00187__D10-156
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26869.1 best | Phage_T4_gp2 | 43.8 | 2.30e-11 | 80.9% | 33.6% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p4tA00 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 30.0 | 4.66e-01 | 79.6% | 98.3% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 31.0 | 4.69e-01 | 82.9% | 100.0% |
| 4b6mB00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.69 | 36.0 | 4.99e-01 | 86.2% | 100.0% |
| 3a5zB01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 28.0 | 4.07e-01 | 88.2% | 98.4% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 28.0 | 3.90e-01 | 79.6% | 97.0% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 28.0 | 3.86e-01 | 78.3% | 94.4% |
| 1e0bA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 22.0 | 3.25e-01 | 72.4% | 90.2% |
| 4ft4B01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.52 | 38.0 | 3.84e-01 | 87.5% | 76.0% |
| 7cceA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.51 | 38.0 | 3.88e-01 | 100.0% | 77.5% |
| 3ptaA03 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.51 | 37.0 | 3.58e-01 | 100.0% | 66.3% |
| 1w4sA00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.51 | 37.0 | 3.78e-01 | 98.7% | 77.4% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3629536 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 35.0 | 4.45e-01 | 88.2% | 76.8% |
| 3507146 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.70 | 34.0 | 4.48e-01 | 87.5% | 82.4% |
| 4027502 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 29.0 | 4.47e-01 | 78.9% | 92.3% |
| 3907176 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.69 | 39.0 | 5.05e-01 | 81.6% | 94.4% |
| 3410370 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 31.0 | 4.47e-01 | 80.3% | 97.1% |
| 3923766 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 38.0 | 4.35e-01 | 80.9% | 80.9% |
| 4345080 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.62 | 29.0 | 4.10e-01 | 83.6% | 100.0% |
| 3707121 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 29.0 | 4.08e-01 | 77.6% | 94.7% |
| 5032255 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 28.0 | 3.98e-01 | 93.4% | 100.0% |
| 3471772 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.58 | 34.0 | 4.36e-01 | 84.2% | 98.9% |
| 3277727 | 4.8.1.43 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › RNHCP | 0.58 | 25.0 | 3.05e-01 | 75.7% | 60.0% |
| 3999482 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.57 | 37.0 | 4.31e-01 | 86.2% | 90.9% |
| 3798523 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.56 | 30.0 | 4.01e-01 | 77.6% | 98.8% |
| 4563194 | 274.1.1.40 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › 17kDa_Anti_2 | 0.56 | 26.0 | 3.30e-01 | 77.0% | 71.3% |
| 3931053 | 4.25.1.2 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD | 0.55 | 36.0 | 4.32e-01 | 82.9% | 100.0% |
| 3490245 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 31.0 | 3.84e-01 | 82.2% | 91.1% |
| 3510024 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.55 | 35.0 | 4.03e-01 | 84.9% | 88.2% |
| 3612182 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 32.0 | 4.10e-01 | 77.6% | 100.0% |
| 3621303 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 32.0 | 3.45e-01 | 86.2% | 69.2% |
| 3992087 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.52 | 39.0 | 3.77e-01 | 100.0% | 68.8% |
| 3670066 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.52 | 37.0 | 3.76e-01 | 100.0% | 72.9% |
| 3460287 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.52 | 38.0 | 3.78e-01 | 100.0% | 71.9% |
| 3575867 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.51 | 38.0 | 3.98e-01 | 100.0% | 84.1% |
| 3824811 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.51 | 38.0 | 3.83e-01 | 100.0% | 76.1% |
| 3390463 | 708.1.1.4 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH | 0.50 | 24.0 | 3.31e-01 | 98.7% | 98.5% |
| 4174957 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.50 | 38.0 | 3.52e-01 | 100.0% | 61.5% |
| 3683487 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.50 | 36.0 | 3.48e-01 | 100.0% | 64.6% |