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LD_Run2_13_scaffold_0_prodigal-single.1__X__X__00112

Bact-Vir

LD_Run2_13_scaffold_0_prodigal-single.1__X__X__00112

Identity

Kingdom:
phage

Quality

84.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 30-211
PDB
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ervA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.81 65.0 7.17e-01 95.1% 100.0%
1p4tA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.81 67.0 7.23e-01 100.0% 99.4%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.78 59.0 6.35e-01 98.9% 90.3%
1bxwA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.77 68.0 7.06e-01 98.4% 96.5%
2f1vA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.73 69.0 6.99e-01 100.0% 98.9%
1yliB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.68 29.0 3.23e-01 97.3% 48.0%
3dzmB00 2.40.160.70 Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. 0.68 65.0 6.23e-01 100.0% 99.5%
3jcuO01 2.40.160.30 Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor 0.65 57.0 5.81e-01 97.8% 94.9%
4fuvA00 2.40.160.170 Mainly Beta › Beta Barrel › Porin › 0.65 62.0 5.82e-01 100.0% 99.5%
2vdfA00 2.40.128.100 Mainly Beta › Beta Barrel › Lipocalin › OPCA outer membrane adhesin/invasin 0.62 58.0 5.39e-01 100.0% 99.6%
2qomB00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.58 53.0 4.59e-01 97.3% 95.5%
3qq2B00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.57 52.0 4.63e-01 97.8% 100.0%
3dwoX00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.56 52.0 3.90e-01 100.0% 75.7%
7btxA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.55 46.0 3.79e-01 90.7% 98.5%
1t16A00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.55 50.0 3.79e-01 99.5% 77.5%
4c4vB02 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.54 46.0 3.68e-01 91.8% 96.7%
1lshA01 2.30.230.10 Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A 0.54 46.0 4.07e-01 90.7% 87.8%
1tlyA00 2.40.230.20 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Nucleoside-specific channel-forming protein, Tsx-like 0.54 46.0 4.15e-01 91.2% 67.3%
4fqeA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.53 41.0 4.32e-01 95.6% 85.3%
4meeA00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.53 46.0 3.97e-01 97.3% 90.8%
6dnzA02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.53 37.0 3.77e-01 70.9% 100.0%
3ff0A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 36.0 4.02e-01 85.7% 90.1%
4c00A04 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.52 45.0 3.74e-01 92.9% 56.4%
2fwvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 45.0 4.49e-01 99.5% 88.9%
6wilA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.51 43.0 3.51e-01 90.1% 94.9%
1f49A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 36.0 3.06e-01 71.4% 96.9%
1nqfA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.51 41.0 3.14e-01 94.0% 36.4%
1fw3A00 2.40.230.10 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Phospholipase A1 0.50 45.0 4.02e-01 95.6% 96.4%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4928614 9.13.1.0 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like 0.88 54.0 6.46e-01 86.3% 87.5%
3385673 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.85 68.0 7.27e-01 97.8% 92.5%
4116729 5084.1.1.6 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OprF 0.84 70.0 7.27e-01 100.0% 91.8%
4099548 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.83 66.0 7.34e-01 97.3% 100.0%
4683047 5084.1.1.29 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PF27340 0.80 70.0 7.36e-01 100.0% 98.8%
4283551 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.80 78.0 7.35e-01 100.0% 91.0%
3964096 5084.1.1.4 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.80 67.0 6.84e-01 99.5% 88.6%
4130771 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.80 74.0 7.43e-01 99.5% 95.1%
3165475 5084.1.1.4 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.79 66.0 7.14e-01 96.7% 99.4%
4042627 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.77 69.0 7.19e-01 97.8% 99.4%
3975352 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.76 62.0 6.69e-01 100.0% 99.3%
4265077 5084.1.1.34 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › DUF2715 0.75 64.0 6.83e-01 97.3% 100.0%
4172098 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.74 70.0 6.75e-01 97.8% 99.5%
4581432 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.74 61.0 6.18e-01 84.6% 98.3%
4537321 5084.1.1.4 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.74 67.0 6.79e-01 100.0% 95.0%
3839919 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.74 70.0 6.55e-01 100.0% 99.5%
4616211 5084.1.1.5 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpW 0.74 69.0 6.92e-01 97.8% 99.5%
141724 5084.1.1.5 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpW 0.74 69.0 6.55e-01 98.4% 95.7%
3838321 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.73 68.0 6.37e-01 96.7% 95.4%
3164124 5084.1.1.4 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.73 48.0 5.83e-01 81.9% 100.0%
4417262 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.73 64.0 6.67e-01 97.8% 99.4%
4279299 5084.1.1.2 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpA_membrane 0.72 68.0 6.86e-01 97.8% 98.3%
3838496 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.72 67.0 6.20e-01 97.8% 99.6%
3975660 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.71 66.0 6.24e-01 96.7% 99.5%
3839675 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.71 66.0 6.75e-01 100.0% 99.4%
4197411 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.71 68.0 6.58e-01 100.0% 98.5%
3388060 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.71 66.0 6.57e-01 97.3% 99.5%
3838035 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.71 67.0 6.48e-01 99.5% 95.5%
3970312 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.71 66.0 6.73e-01 100.0% 99.4%
4421608 5084.1.1.35 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Surface_Ag_2 0.71 66.0 5.97e-01 97.3% 100.0%
3839690 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.71 67.0 6.55e-01 99.5% 100.0%
3977398 5084.1.1.16 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Ail_Lom 0.69 58.0 6.19e-01 96.7% 99.4%
200662 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.69 66.0 6.30e-01 100.0% 99.5%
3839432 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.69 66.0 6.22e-01 100.0% 87.6%
3839251 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.68 64.0 6.41e-01 98.9% 97.3%
1065880 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.65 62.0 5.82e-01 100.0% 99.5%
169832 5084.1.1.2 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpA_membrane 0.62 58.0 5.55e-01 100.0% 86.5%
3193339 9.13.1.4 beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3237 0.62 47.0 5.01e-01 89.0% 89.0%
4353229 5084.5.4.0 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein 0.59 54.0 4.63e-01 100.0% 96.9%
4009884 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.57 52.0 4.35e-01 97.8% 87.5%
3978611 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.57 52.0 4.34e-01 100.0% 86.8%
4038477 5084.3.1.3 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › PF29188 0.57 52.0 4.27e-01 97.3% 85.4%
3966027 5084.5.4.1 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › Toluene_X 0.57 52.0 3.91e-01 99.5% 75.4%
4150627 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.57 52.0 4.32e-01 97.8% 89.9%
4010697 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.56 50.0 4.06e-01 95.1% 90.1%
3974124 5084.1.1.11 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg 0.56 50.0 4.37e-01 98.4% 91.4%
3594654 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.55 50.0 3.93e-01 97.3% 61.6%
3973062 5084.5.4.0 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein 0.54 49.0 3.82e-01 100.0% 78.2%
3838722 5084.3.1.3 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › PF29188 0.53 47.0 4.00e-01 97.8% 86.3%
4501883 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.53 47.0 3.67e-01 93.4% 53.6%
3387368 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.53 48.0 4.26e-01 97.8% 95.8%
3971211 5084.5.1.6 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprB 0.53 46.0 3.52e-01 91.8% 50.9%
4622073 5084.5.4.5 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.53 49.0 3.96e-01 98.4% 80.0%
3164364 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.53 48.0 4.14e-01 100.0% 85.5%
3500359 9.1.1.45 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › FBO_C 0.52 45.0 4.71e-01 96.7% 100.0%
3969607 5084.1.1.11 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg 0.51 44.0 3.81e-01 97.3% 96.5%
3515197 4051.1.1.2 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.51 37.0 3.88e-01 94.5% 80.6%
4200093 5084.5.1.9 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_O_P 0.51 46.0 3.58e-01 96.2% 92.7%
3165307 5084.5.4.1 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › Toluene_X 0.51 46.0 3.51e-01 98.9% 95.9%
3968806 5084.5.1.68 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF27733 0.50 45.0 4.37e-01 97.3% 94.2%
D2 high residues 280-376
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00691.26 best OmpA 73.2 2.70e-20 95.9% 90.8%
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5m38C00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.92 88.0 8.24e-01 100.0% 93.0%
3cypB00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.92 88.0 7.81e-01 100.0% 80.6%
5wtpA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.92 87.0 7.91e-01 100.0% 82.3%
2lbtA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.91 87.0 7.67e-01 100.0% 77.9%
3wpwA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.88 84.0 7.07e-01 100.0% 73.8%
4rhaA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.88 83.0 7.40e-01 100.0% 87.8%
3oonA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.88 79.0 7.49e-01 100.0% 81.4%
1r1mA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.88 82.0 7.16e-01 100.0% 90.0%
2aizP01 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.86 80.0 7.67e-01 100.0% 94.5%
3khnB00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.86 80.0 6.70e-01 100.0% 70.7%
4b62A00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.85 79.0 6.82e-01 100.0% 76.2%
2zovA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.81 77.0 6.25e-01 100.0% 62.0%
6aeoB01 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.81 75.0 6.64e-01 100.0% 81.5%
3tr9B00 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.74 51.0 3.67e-01 71.1% 27.0%
6omzA00 3.20.20.20 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like 0.72 50.0 3.52e-01 71.1% 27.0%
5a0tB01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.69 45.0 3.13e-01 79.4% 21.8%
3hutA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.69 39.0 3.36e-01 80.4% 35.3%
3hgmA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.68 59.0 5.08e-01 93.8% 84.4%
5hy0A01 3.30.1330.170 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Cyanuric acid hydrolase/Barbiturase, RU A 0.67 56.0 5.42e-01 100.0% 82.4%
5l16A01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.64 52.0 4.90e-01 100.0% 70.7%
2cycA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.64 57.0 4.35e-01 99.0% 65.0%
4fb5A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.64 54.0 4.05e-01 92.8% 55.8%
1ofuA02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.63 50.0 5.17e-01 100.0% 90.3%
4ei7B01 3.30.1330.190 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › 0.63 55.0 4.86e-01 100.0% 70.1%
2iu4A02 3.30.1180.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › Dihydroxyacetone kinase; domain 2 0.61 54.0 4.69e-01 100.0% 81.5%
3uuwB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.60 50.0 4.08e-01 91.8% 57.6%
3euwA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.60 50.0 3.92e-01 92.8% 56.8%
3kizA01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.59 51.0 4.63e-01 100.0% 76.6%
1p9lA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.59 51.0 4.99e-01 99.0% 86.0%
2gviA02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.59 41.0 4.19e-01 93.8% 73.2%
1vk3A03 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.59 49.0 4.33e-01 100.0% 61.9%
2bx2L02 3.40.1260.20 Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › Ribonuclease E, catalytic domain 0.58 42.0 4.07e-01 99.0% 68.2%
2ywmA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.57 48.0 4.54e-01 91.8% 100.0%
1yawB01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.56 45.0 4.13e-01 100.0% 64.9%
1a8lA02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.56 48.0 4.66e-01 91.8% 100.0%
2rb9A01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.56 45.0 4.06e-01 100.0% 61.8%
1t8hA00 3.60.140.10 Alpha Beta › 4-Layer Sandwich › CNF1/YfiH-like putative cysteine hydrolases › CNF1/YfiH-like putative cysteine hydrolases 0.55 50.0 3.63e-01 100.0% 46.0%
1r26A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 32.0 3.08e-01 100.0% 46.9%
1z6nA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 46.0 3.89e-01 94.8% 79.5%
4f9zA02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 37.0 3.48e-01 71.1% 57.8%
2hlsA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 47.0 4.39e-01 96.9% 95.0%
5ykwA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 31.0 3.08e-01 100.0% 50.0%
5u4qB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 47.0 3.39e-01 100.0% 44.1%
4nwyA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 36.0 3.28e-01 70.1% 51.6%
3q6oA02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 32.0 3.20e-01 71.1% 55.3%
1gh2A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 31.0 3.07e-01 100.0% 50.5%
2ep5A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 45.0 3.76e-01 97.9% 56.5%
2yutA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 44.0 3.52e-01 93.8% 50.2%
6i1cA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 31.0 3.03e-01 100.0% 50.9%
2ywmA02 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 45.0 4.35e-01 92.8% 89.9%
1zynA00 3.40.30.80 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.52 42.0 3.38e-01 89.7% 81.1%
3q6oA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 32.0 3.00e-01 100.0% 46.9%
3ewlB00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 40.0 3.64e-01 100.0% 61.3%
7clgA01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.51 40.0 3.25e-01 96.9% 43.2%
1hyuA04 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 43.0 4.40e-01 93.8% 100.0%
1thxA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 31.0 3.03e-01 100.0% 52.8%
ECOD (85)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3386470 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.97 94.0 8.60e-01 100.0% 85.8%
4273645 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.96 93.0 7.99e-01 100.0% 73.9%
4885799 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.95 92.0 8.30e-01 100.0% 87.8%
4167111 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.94 91.0 8.34e-01 100.0% 93.3%
3385657 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.94 90.0 8.16e-01 100.0% 83.9%
3973393 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.93 89.0 7.47e-01 100.0% 70.0%
3981506 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.92 88.0 7.23e-01 100.0% 66.3%
2773879 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.92 88.0 7.39e-01 100.0% 86.0%
4527021 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.92 88.0 8.24e-01 100.0% 84.3%
3962237 301.3.1.0 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like 0.92 88.0 8.19e-01 100.0% 88.7%
None 0.92 87.0 7.91e-01 100.0% 82.3%
344882 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.91 87.0 7.74e-01 99.0% 82.8%
3948407 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.91 87.0 7.85e-01 100.0% 85.6%
4482275 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.91 87.0 7.32e-01 100.0% 74.7%
3967490 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.91 87.0 8.13e-01 100.0% 89.6%
1347936 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.91 86.0 7.84e-01 100.0% 82.3%
None 0.91 87.0 7.29e-01 100.0% 70.7%
3967481 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.91 86.0 7.28e-01 100.0% 70.0%
3964336 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.91 86.0 7.26e-01 100.0% 70.7%
3976972 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.90 85.0 7.21e-01 100.0% 73.2%
3386253 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.90 85.0 7.26e-01 100.0% 69.7%
4182188 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.90 85.0 7.00e-01 100.0% 70.6%
3971865 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.89 84.0 6.94e-01 100.0% 68.1%
216283 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.89 84.0 6.55e-01 100.0% 59.3%
4676587 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.89 84.0 7.63e-01 100.0% 86.2%
4214736 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.89 84.0 7.00e-01 100.0% 71.0%
4008652 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.89 84.0 6.70e-01 100.0% 62.9%
1348659 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.88 84.0 7.07e-01 100.0% 73.8%
140769 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.88 79.0 7.49e-01 100.0% 81.4%
1347560 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.88 83.0 7.07e-01 100.0% 80.1%
3973054 301.3.1.0 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like 0.88 83.0 6.63e-01 100.0% 63.4%
999250 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.87 82.0 6.54e-01 100.0% 62.9%
3968879 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.87 82.0 6.84e-01 100.0% 69.0%
1824325 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.87 82.0 7.10e-01 100.0% 76.3%
4007736 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.86 80.0 7.09e-01 100.0% 79.3%
3387029 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.86 80.0 6.80e-01 100.0% 78.0%
2798263 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.84 78.0 6.69e-01 100.0% 71.1%
2798318 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.84 78.0 6.63e-01 100.0% 70.2%
3967361 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.83 78.0 7.22e-01 100.0% 85.7%
4346934 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.83 77.0 7.25e-01 100.0% 87.0%
2499495 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.81 75.0 6.14e-01 100.0% 66.7%
4886896 301.3.1.1 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like › OmpA 0.79 65.0 6.08e-01 87.6% 73.1%
3979733 301.3.1.0 a+b three layers › Bacillus chorismate mutase-like › OmpA-like › OmpA-like 0.79 66.0 6.50e-01 100.0% 83.8%
3706512 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.64 52.0 4.34e-01 100.0% 51.2%
4947974 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.63 49.0 4.41e-01 100.0% 58.6%
4982903 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.63 49.0 4.29e-01 100.0% 54.7%
3290445 298.1.1.9 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › DapB_C 0.63 53.0 4.99e-01 90.7% 83.5%
3489448 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.63 47.0 4.91e-01 97.9% 90.6%
3598818 301.2.1.0 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like 0.62 51.0 4.28e-01 100.0% 50.9%
4977866 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.62 48.0 4.23e-01 100.0% 54.7%
4945622 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.62 48.0 4.16e-01 100.0% 52.9%
4489492 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.62 52.0 3.98e-01 93.8% 50.2%
3286308 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.61 51.0 4.04e-01 93.8% 57.2%
5001175 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.61 47.0 4.21e-01 100.0% 56.6%
4981015 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.60 50.0 4.12e-01 100.0% 48.6%
3603558 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.59 49.0 4.27e-01 100.0% 58.1%
5066231 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.59 47.0 4.25e-01 100.0% 62.1%
3872766 298.1.1.12 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Biliv-reduc_cat 0.58 48.0 4.49e-01 91.8% 83.2%
5025733 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.58 43.0 4.47e-01 93.8% 89.4%
3283334 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.58 48.0 4.08e-01 92.8% 70.6%
4948829 304.111.1.4 a+b two layers › Alpha-beta plaits › PurM C-terminal domain-like › PurM C-terminal domain-like › AIRS 0.57 46.0 3.37e-01 100.0% 30.7%
4540637 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.57 47.0 4.19e-01 100.0% 63.6%
4274861 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.57 46.0 4.06e-01 100.0% 58.7%
4991549 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.57 46.0 4.04e-01 100.0% 57.4%
4979713 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.56 44.0 3.98e-01 100.0% 58.6%
3510059 7528.1.1.1 a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_I 0.56 41.0 4.34e-01 93.8% 88.2%
4998883 301.2.1.5 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS_C 0.56 44.0 3.18e-01 100.0% 27.0%
4971749 2485.1.1.46 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_9 0.56 48.0 4.24e-01 94.8% 76.6%
3539623 3008.1.1.0 a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.56 45.0 4.55e-01 94.8% 89.5%
196945 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.56 45.0 4.09e-01 100.0% 62.7%
5065735 2485.1.1.46 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_9 0.55 48.0 4.20e-01 94.8% 78.3%
5001599 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.55 45.0 3.25e-01 100.0% 28.7%
4172022 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.55 45.0 4.12e-01 100.0% 68.5%
4534141 301.2.1.1 a+b three layers › Bacillus chorismate mutase-like › PurM N-terminal domain-like › PurM N-terminal domain-like › AIRS 0.55 45.0 4.09e-01 100.0% 65.0%
3339440 3008.1.1.0 a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.53 44.0 4.30e-01 91.8% 89.5%
3601582 7585.1.1.0 a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins 0.53 45.0 3.53e-01 94.8% 95.3%
5070011 2485.1.1.38 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_3 0.53 45.0 4.37e-01 92.8% 89.1%
4946644 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.52 44.0 4.35e-01 90.7% 96.2%
5078438 2485.1.1.38 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_3 0.52 43.0 4.22e-01 90.7% 98.1%
1196558 2485.1.1.38 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_3 0.52 45.0 4.32e-01 92.8% 89.9%
5022702 3008.1.1.0 a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.52 44.0 4.46e-01 96.9% 96.9%
3743644 7585.1.1.1 a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Sec1 0.51 45.0 3.54e-01 99.0% 82.9%
3641308 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.51 31.0 2.98e-01 100.0% 48.3%
5054800 2485.1.1.38 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_3 0.51 43.0 4.34e-01 92.8% 97.0%
4987551 2485.1.1.38 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_3 0.51 43.0 4.30e-01 92.8% 97.0%