LEF-1

Euk-Vir

Operophtera_brumata_nucleopolyhedrovirus

LEF-1__YP_009552675__Operophtera_brumata_nucleopolyhedrovirus__1046267

Identity

90.2 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Operophtera_brumata_nucleopolyhedrovirus

TaxID: 1046267

View cluster (46 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 79-105_127-201

PDB

Domain cluster: representative

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4fqgB03	1.10.10.440	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain	0.59	38.0	4.46e-01	99.0%	100.0%
3tqsA02	1.10.8.100	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › rRNA adenine dimethylase, C-terminal domain	0.57	30.0	3.66e-01	93.1%	80.0%
4j8sA00	1.25.40.840	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › CCR4-NOT transcription complex subunit 1 TTP binding domain	0.57	41.0	3.47e-01	76.5%	73.9%
1z19A01	1.10.150.130	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain	0.54	37.0	3.78e-01	100.0%	71.0%
4xaiB02	1.10.565.10	Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor	0.52	45.0	3.71e-01	98.0%	99.0%
4m0mA03	1.20.1270.430	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.52	31.0	3.38e-01	89.2%	74.7%
3deeA01	1.10.150.690	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063	0.51	31.0	3.31e-01	87.3%	68.6%
3if8B02	1.20.58.730	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.50	29.0	3.02e-01	83.3%	57.0%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3969002	5050.1.1.9 ↗	alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1	0.52	42.0	3.49e-01	89.2%	89.5%
3611276	4953.1.1.0 ↗	beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like	0.52	37.0	3.77e-01	100.0%	76.0%
4986198	101.1.10.0 ↗	alpha arrays › HTH › HTH › Cyclin-like	0.52	31.0	3.26e-01	87.3%	65.6%
3611586	102.1.1.0 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like	0.51	43.0	4.28e-01	92.2%	89.5%
3600865	5086.1.1.0 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins	0.50	35.0	2.98e-01	90.2%	42.9%

D2 medium residues 1-78_106-126_202-223

PDB

Domain cluster: rep: IMGVR_UViG_3300025073_001004-3300025073-Ga0208245_100042257__D1-82_170-181