LEF-2

Euk-Vir

Operophtera_brumata_nucleopolyhedrovirus

LEF-2__YP_009552671__Operophtera_brumata_nucleopolyhedrovirus__1046267

Identity

76.7 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Operophtera_brumata_nucleopolyhedrovirus

TaxID: 1046267

View cluster (32 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-66

PDB

Domain cluster: rep: lef2__YP_009666652__Oxyplax_ochracea_nucleopolyhedrovirus__2083176__D13-67

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03041.21 best	Baculo_LEF-2	48.4	1.30e-12	79.6%	27.0%

D2 high residues 88-194

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03041.21 best	Baculo_LEF-2	109.6	1.90e-31	84.1%	56.6%

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3frrA00	1.20.1260.60	Mainly Alpha › Up-down Bundle › Ferritin › Vacuolar protein sorting-associated protein Ist1	0.62	49.0	4.11e-01	86.0%	74.7%
2es9A00	1.20.1290.30	Mainly Alpha › Up-down Bundle › AhpD-like ›	0.57	42.0	4.36e-01	93.5%	84.0%
3o4zA02	1.25.40.720	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tel2 C-terminal domain	0.57	39.0	3.22e-01	70.1%	58.8%
3o60A00	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.52	44.0	3.74e-01	92.5%	79.1%
3dr5A00	3.40.50.150	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39	0.52	43.0	3.48e-01	91.6%	90.3%
2fd5A02	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.52	43.0	4.01e-01	90.7%	78.0%
3nbxX03	1.20.58.1510	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.50	35.0	3.64e-01	72.9%	87.1%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5039859	6035.1.1.0 ↗	alpha bundles › Primase helical domain › Primase helical domain › Primase helical domain	0.67	52.0	5.58e-01	88.8%	98.9%
3824846	604.17.1.0 ↗	alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like	0.65	42.0	5.03e-01	72.0%	100.0%
3705222	109.4.1.17 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cullin	0.58	40.0	4.22e-01	85.0%	81.1%
4959934	616.1.1.0 ↗	alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain	0.55	35.0	4.04e-01	73.8%	92.0%
4995205	632.11.1.0 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like	0.54	30.0	3.49e-01	80.4%	77.3%