←Back to structures
LEF-3
Euk-VirMamestra_configurata_nucleopolyhedrovirus_A
LEF-3__NP_613196__Mamestra_configurata_nucleopolyhedrovirus_A__207830
Identity
- Accession:
- NP_613196 ↗
- Protein ID:
- LEF-3
- Kingdom:
- euk
Quality
81.2
mean pLDDT
Taxonomy
Naldaviricetes›
Lefavirales›
Baculoviridae›
Alphabaculovirus›
Mamestra_configurata_nucleopolyhedrovirus_A
TaxID: 207830
Cluster
View cluster (42 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 63-131
Domain cluster:
rep: IMGVR_UViG_3300029825_000003-3300029825-Ga0134835_10002589__D37-104
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05847.19 best | Baculo_LEF-3 | 77.3 | 2.00e-21 | 97.1% | 20.5% |
CATH (69)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gm5A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.84 | 77.0 | 6.66e-01 | 100.0% | 78.4% |
| 1fguB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.82 | 75.0 | 6.43e-01 | 100.0% | 89.5% |
| 3k7uC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.82 | 74.0 | 6.57e-01 | 100.0% | 92.9% |
| 1ixrA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.79 | 68.0 | 7.08e-01 | 95.7% | 100.0% |
| 1z9fA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.79 | 72.0 | 6.56e-01 | 100.0% | 92.1% |
| 4bwgD00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.79 | 68.0 | 6.03e-01 | 94.2% | 89.7% |
| 4owwB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.79 | 72.0 | 6.14e-01 | 100.0% | 74.8% |
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.79 | 62.0 | 6.34e-01 | 87.0% | 86.6% |
| 4dkaC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.78 | 72.0 | 6.65e-01 | 100.0% | 98.8% |
| 5gqoA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.78 | 70.0 | 6.22e-01 | 100.0% | 84.5% |
| 4jbmB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.76 | 68.0 | 6.06e-01 | 98.6% | 82.3% |
| 3k59A01 | 2.40.50.590 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › DNA polymerase B, N domain, beta-barrel | 0.75 | 69.0 | 6.37e-01 | 100.0% | 90.6% |
| 1bvsA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.75 | 64.0 | 6.56e-01 | 97.1% | 98.5% |
| 7k98B01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 64.0 | 5.43e-01 | 95.7% | 81.6% |
| 1o7iB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 65.0 | 5.57e-01 | 100.0% | 71.9% |
| 2k75A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 66.0 | 5.75e-01 | 100.0% | 89.3% |
| 4l5tB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 66.0 | 5.98e-01 | 100.0% | 82.4% |
| 3u1wA02 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.72 | 45.0 | 4.61e-01 | 88.4% | 65.2% |
| 4da2A01 | 2.40.50.580 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.71 | 61.0 | 5.84e-01 | 100.0% | 82.3% |
| 2ok7A01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.71 | 55.0 | 4.70e-01 | 84.1% | 98.2% |
| 1gd7A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 62.0 | 5.37e-01 | 100.0% | 84.4% |
| 2crvA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.69 | 50.0 | 4.57e-01 | 76.8% | 97.8% |
| 4egvA02 | 2.40.50.840 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.69 | 60.0 | 5.90e-01 | 98.6% | 94.7% |
| 2gaiA03 | 2.70.20.10 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 | 0.68 | 50.0 | 4.20e-01 | 79.7% | 84.6% |
| 6gmhH01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 58.0 | 4.62e-01 | 97.1% | 99.3% |
| 3j7yD01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 51.0 | 4.38e-01 | 79.7% | 53.8% |
| 2i5hA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 57.0 | 5.68e-01 | 94.2% | 88.9% |
| 2czoA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.67 | 51.0 | 4.26e-01 | 85.5% | 94.6% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 43.0 | 4.30e-01 | 87.0% | 64.8% |
| 4oxwA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.65 | 49.0 | 4.27e-01 | 81.2% | 100.0% |
| 2bs6A01 | 2.40.128.190 | Mainly Beta › Beta Barrel › Lipocalin › | 0.64 | 39.0 | 3.70e-01 | 87.0% | 50.0% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 42.0 | 4.00e-01 | 87.0% | 58.0% |
| 1r0mA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.63 | 49.0 | 3.99e-01 | 84.1% | 82.3% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.63 | 41.0 | 4.35e-01 | 98.6% | 78.0% |
| 1o5yA00 | 3.10.690.10 | Alpha Beta › Roll › Bifunctional nuclease domain › Bifunctional nuclease domain | 0.62 | 52.0 | 4.22e-01 | 97.1% | 79.0% |
| 2lqkA00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.62 | 42.0 | 4.21e-01 | 98.6% | 70.0% |
| 1xteA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.62 | 48.0 | 4.04e-01 | 84.1% | 88.8% |
| 3p0cA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.62 | 49.0 | 4.23e-01 | 88.4% | 95.5% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.61 | 43.0 | 4.22e-01 | 100.0% | 69.3% |
| 2hzgB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.61 | 46.0 | 3.68e-01 | 82.6% | 76.2% |
| 2lnjA00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.60 | 44.0 | 3.30e-01 | 78.3% | 90.0% |
| 3iq2A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.60 | 45.0 | 3.84e-01 | 84.1% | 93.5% |
| 2i4kA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.59 | 45.0 | 3.75e-01 | 85.5% | 99.2% |
| 2bz0A00 | 3.40.50.10990 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTP cyclohydrolase II | 0.58 | 49.0 | 3.68e-01 | 94.2% | 79.8% |
| 3lxuX02 | 2.20.25.690 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.57 | 40.0 | 4.02e-01 | 87.0% | 70.8% |
| 4hasA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 44.0 | 3.88e-01 | 84.1% | 99.0% |
| 2pmaA01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.57 | 50.0 | 4.20e-01 | 100.0% | 78.5% |
| 1whqA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 40.0 | 3.98e-01 | 76.8% | 85.9% |
| 7xr9E01 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.55 | 37.0 | 2.74e-01 | 71.0% | 95.4% |
| 1lf7A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 42.0 | 3.26e-01 | 84.1% | 80.5% |
| 3nvnA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 45.0 | 2.83e-01 | 91.3% | 26.4% |
| 5fgoA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 36.0 | 3.79e-01 | 89.9% | 75.8% |
| 2l2nA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 38.0 | 3.80e-01 | 73.9% | 81.7% |
| 2n3gA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 39.0 | 3.88e-01 | 76.8% | 86.1% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.54 | 38.0 | 3.06e-01 | 76.8% | 84.1% |
| 1wquA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 44.0 | 3.75e-01 | 91.3% | 60.5% |
| 2dmyA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 41.0 | 3.69e-01 | 84.1% | 74.2% |
| 3d4eA01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.53 | 43.0 | 4.09e-01 | 89.9% | 79.8% |
| 4h7wA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.53 | 40.0 | 3.08e-01 | 87.0% | 60.4% |
| 2ra6C00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 46.0 | 3.64e-01 | 97.1% | 58.0% |
| 1omoA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.52 | 41.0 | 3.32e-01 | 89.9% | 87.2% |
| 1epaA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 44.0 | 3.42e-01 | 97.1% | 76.2% |
| 1pbyA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.52 | 43.0 | 3.79e-01 | 95.7% | 78.3% |
| 3oe3C00 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.52 | 42.0 | 3.90e-01 | 89.9% | 76.1% |
| 2lexA00 | 2.20.25.80 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain | 0.52 | 35.0 | 3.61e-01 | 88.4% | 77.8% |
| 1qw2A00 | 3.30.1980.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical protein Ta1206 fold › Hypothetical protein YunC | 0.51 | 39.0 | 3.41e-01 | 81.2% | 54.9% |
| 7pkwA01 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 38.0 | 3.39e-01 | 88.4% | 55.3% |
| 3hi2B00 | 3.30.2310.40 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › | 0.51 | 38.0 | 3.43e-01 | 92.8% | 57.7% |
| 2kieA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.50 | 41.0 | 3.45e-01 | 92.8% | 58.1% |
ECOD (89)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4446654 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.87 | 77.0 | 7.67e-01 | 100.0% | 92.9% |
| 5035327 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.84 | 76.0 | 7.02e-01 | 97.1% | 90.6% |
| 5005288 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.83 | 76.0 | 5.77e-01 | 100.0% | 56.8% |
| 4932452 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.83 | 73.0 | 6.50e-01 | 95.7% | 93.7% |
| 4390251 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.82 | 67.0 | 7.17e-01 | 95.7% | 100.0% |
| 4052975 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.82 | 74.0 | 6.30e-01 | 100.0% | 71.8% |
| 4602887 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.81 | 74.0 | 7.23e-01 | 100.0% | 97.3% |
| 5012082 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.81 | 72.0 | 6.45e-01 | 97.1% | 92.6% |
| 3588305 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.81 | 74.0 | 6.77e-01 | 100.0% | 84.3% |
| 4322651 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.81 | 70.0 | 7.27e-01 | 98.6% | 98.5% |
| 3838219 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.80 | 74.0 | 6.85e-01 | 100.0% | 90.6% |
| 5059673 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.80 | 73.0 | 6.39e-01 | 100.0% | 80.0% |
| 5043498 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.80 | 70.0 | 4.28e-01 | 95.7% | 37.2% |
| 5069581 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.80 | 71.0 | 6.09e-01 | 100.0% | 80.0% |
| 4976869 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.80 | 73.0 | 6.07e-01 | 100.0% | 88.7% |
| 3228963 | 2.1.1.311 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF31223 | 0.79 | 72.0 | 6.34e-01 | 100.0% | 78.0% |
| 426155 | 2.24.1.1 ↗ | beta barrels › OB-fold › probable receptor YhhM › probable receptor YhhM › DUF2500 | 0.79 | 71.0 | 7.10e-01 | 100.0% | 95.8% |
| 4469294 | 2.3.1.0 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like | 0.79 | 72.0 | 5.93e-01 | 100.0% | 70.8% |
| 3963927 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.79 | 72.0 | 6.09e-01 | 100.0% | 74.5% |
| 4506647 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.79 | 68.0 | 7.01e-01 | 97.1% | 98.5% |
| 4942684 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.79 | 71.0 | 5.26e-01 | 100.0% | 97.6% |
| 5055355 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.79 | 72.0 | 6.53e-01 | 100.0% | 95.6% |
| 4995606 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.78 | 71.0 | 6.47e-01 | 100.0% | 85.6% |
| 5040544 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.78 | 71.0 | 6.01e-01 | 100.0% | 84.5% |
| 4534526 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.78 | 67.0 | 6.93e-01 | 98.6% | 98.5% |
| 4144799 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.77 | 69.0 | 6.88e-01 | 97.1% | 100.0% |
| 3788812 | 304.114.1.6 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain › DNA_pol_B_exo1 | 0.77 | 68.0 | 4.64e-01 | 98.6% | 72.9% |
| 4995707 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 70.0 | 6.14e-01 | 100.0% | 82.0% |
| 3888828 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 71.0 | 5.31e-01 | 100.0% | 73.6% |
| 3276150 | 2.1.1.52 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Stn1 | 0.77 | 69.0 | 5.34e-01 | 100.0% | 76.0% |
| 4436860 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 66.0 | 6.80e-01 | 98.6% | 98.5% |
| 5036293 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 70.0 | 6.13e-01 | 100.0% | 83.0% |
| 4504110 | 2484.1.1.197 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1, DNA_pol_B_exo2 | 0.77 | 69.0 | 4.20e-01 | 100.0% | 38.8% |
| 5015768 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 69.0 | 6.05e-01 | 98.6% | 81.0% |
| 3705431 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 70.0 | 5.81e-01 | 100.0% | 96.5% |
| 5037301 | 2.1.1.111 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB | 0.76 | 69.0 | 6.23e-01 | 100.0% | 88.3% |
| 5001820 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 69.0 | 6.04e-01 | 100.0% | 80.0% |
| 4951315 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.76 | 68.0 | 5.83e-01 | 100.0% | 80.9% |
| 3623452 | 2.3.1.0 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like | 0.76 | 68.0 | 5.12e-01 | 100.0% | 60.4% |
| 4959991 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 67.0 | 6.75e-01 | 98.6% | 100.0% |
| 4145173 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.76 | 68.0 | 5.90e-01 | 100.0% | 76.2% |
| 5045871 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.75 | 65.0 | 6.51e-01 | 95.7% | 98.6% |
| 5001821 | 2.1.1.111 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB | 0.75 | 67.0 | 5.84e-01 | 100.0% | 78.1% |
| 3511262 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 68.0 | 6.37e-01 | 100.0% | 98.8% |
| 4943166 | 2.1.1.44 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 | 0.75 | 67.0 | 6.40e-01 | 98.6% | 100.0% |
| 5064367 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 67.0 | 6.16e-01 | 100.0% | 81.1% |
| 5069582 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.74 | 65.0 | 5.91e-01 | 100.0% | 86.3% |
| 4030120 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.74 | 51.0 | 3.04e-01 | 72.5% | 12.0% |
| 4095892 | 2.4.1.3 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK | 0.74 | 58.0 | 4.54e-01 | 84.1% | 80.7% |
| 4233469 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.73 | 66.0 | 5.43e-01 | 100.0% | 56.0% |
| 4927437 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 64.0 | 6.39e-01 | 97.1% | 98.6% |
| 1140900 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.73 | 45.0 | 4.86e-01 | 88.4% | 72.9% |
| 5068131 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.73 | 64.0 | 5.78e-01 | 100.0% | 87.4% |
| 4209313 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.72 | 65.0 | 5.84e-01 | 100.0% | 74.7% |
| 4271190 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.72 | 65.0 | 5.13e-01 | 100.0% | 53.6% |
| 4062751 | 2.1.1.13 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a | 0.72 | 57.0 | 6.09e-01 | 95.7% | 98.3% |
| 4202594 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.72 | 65.0 | 4.15e-01 | 100.0% | 22.5% |
| 3797107 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 65.0 | 5.84e-01 | 100.0% | 82.1% |
| 4210460 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.72 | 53.0 | 4.38e-01 | 78.3% | 86.7% |
| 3505867 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.71 | 64.0 | 6.28e-01 | 100.0% | 90.7% |
| 5083382 | 2.1.1.13 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a | 0.71 | 57.0 | 5.99e-01 | 97.1% | 100.0% |
| 4114579 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.71 | 64.0 | 5.93e-01 | 98.6% | 81.2% |
| 4886517 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.71 | 64.0 | 5.24e-01 | 100.0% | 56.0% |
| 5023732 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 61.0 | 5.74e-01 | 95.7% | 83.5% |
| 5056966 | 264.2.1.1 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac | 0.70 | 52.0 | 4.30e-01 | 78.3% | 85.0% |
| 3279407 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 61.0 | 5.24e-01 | 100.0% | 78.2% |
| 3960657 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 58.0 | 5.72e-01 | 95.7% | 93.3% |
| 5039400 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.69 | 50.0 | 3.23e-01 | 89.9% | 17.7% |
| 4985735 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.68 | 59.0 | 5.39e-01 | 100.0% | 83.2% |
| 4243492 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.67 | 43.0 | 4.62e-01 | 87.0% | 75.0% |
| 4051081 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.67 | 45.0 | 4.80e-01 | 98.6% | 81.7% |
| 3213991 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 55.0 | 5.57e-01 | 97.1% | 92.9% |
| 3590914 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.67 | 50.0 | 4.28e-01 | 79.7% | 90.0% |
| 3947044 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 55.0 | 5.38e-01 | 97.1% | 89.3% |
| 3215090 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 51.0 | 5.28e-01 | 94.2% | 93.8% |
| 5071787 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.64 | 58.0 | 4.66e-01 | 100.0% | 92.3% |
| 3716770 | 2.1.1.135 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 | 0.63 | 55.0 | 4.78e-01 | 97.1% | 72.4% |
| 3893735 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.62 | 50.0 | 4.25e-01 | 89.9% | 89.6% |
| 3934936 | 2.1.1.27 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNA_pol_Rpb8 | 0.61 | 52.0 | 4.20e-01 | 100.0% | 98.6% |
| 1112010 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.61 | 43.0 | 4.22e-01 | 100.0% | 69.3% |
| 3560835 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.61 | 54.0 | 3.46e-01 | 100.0% | 84.4% |
| 4486857 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.61 | 48.0 | 3.93e-01 | 88.4% | 85.2% |
| 3479868 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 51.0 | 4.71e-01 | 100.0% | 72.2% |
| 3783181 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.59 | 46.0 | 4.04e-01 | 87.0% | 95.5% |
| 4027440 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.58 | 46.0 | 4.01e-01 | 88.4% | 93.6% |
| 3164017 | 9.11.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like | 0.53 | 44.0 | 4.09e-01 | 92.8% | 77.8% |
| 3920675 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.53 | 35.0 | 3.41e-01 | 89.9% | 62.7% |
| 3482073 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.51 | 34.0 | 3.57e-01 | 89.9% | 78.3% |
| 3286982 | 330.6.1.0 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain | 0.50 | 41.0 | 3.65e-01 | 92.8% | 95.2% |
D2
high
residues 147-274
Domain cluster:
rep: LEF-3__YP_009249949__Mocis_latipes_granulovirus__2072024__D98-243
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05847.19 best | Baculo_LEF-3 | 171.9 | 3.20e-50 | 100.0% | 39.3% |
D3
high
residues 280-384
Domain cluster:
rep: lef-3__YP_009186752__Sucra_jujuba_nucleopolyhedrovirus__1563660__D307-415
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05847.19 best | Baculo_LEF-3 | 84.1 | 1.60e-23 | 99.1% | 33.1% |