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LEF-3

Euk-Vir

Mocis_latipes_granulovirus

LEF-3__YP_009249949__Mocis_latipes_granulovirus__2072024

Identity

Accession:
YP_009249949 ↗
Protein ID:
LEF-3
Kingdom:
euk

Quality

82.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-89
PDB
D2 high residues 98-243
PDB
Domain cluster: representative
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1gm5A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.84 54.0 6.41e-01 86.3% 93.1%
5gqoA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.80 48.0 5.80e-01 77.4% 89.7%
3f2bA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.80 52.0 6.28e-01 84.2% 100.0%
3kojB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.78 47.0 5.89e-01 75.3% 96.7%
4dkaC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.78 46.0 5.94e-01 74.7% 100.0%
1o7iB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.75 56.0 6.29e-01 97.9% 99.1%
4jbjA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 51.0 5.76e-01 93.2% 91.8%
2cqaA01 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.74 39.0 5.32e-01 79.5% 100.0%
2hqlA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 46.0 5.76e-01 75.3% 100.0%
2k50A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 51.0 5.93e-01 84.9% 98.1%
2cwaA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 50.0 5.73e-01 87.0% 93.6%
8aa9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.73 55.0 6.14e-01 91.1% 100.0%
4jbmB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 47.0 5.68e-01 90.4% 100.0%
3f1zI00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 52.0 5.76e-01 82.9% 93.1%
1fguB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 50.0 5.85e-01 83.6% 100.0%
2k5vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 45.0 5.37e-01 84.9% 95.9%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 26.0 3.85e-01 73.3% 77.8%
2iciA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 37.0 4.81e-01 75.3% 100.0%
2zxrA01 2.40.50.460 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 45.0 4.44e-01 84.9% 64.6%
4gnxC03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 53.0 4.95e-01 87.7% 92.3%
2z4hA02 2.40.50.540 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NlpE, C-terminal domain 0.62 37.0 4.57e-01 79.5% 98.8%
8c5yA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 51.0 4.82e-01 87.7% 95.9%
6tnyB02 2.40.50.430 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 41.0 4.64e-01 84.9% 90.2%
5l37C00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.58 34.0 4.30e-01 76.7% 97.7%
1r0mA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.58 40.0 4.27e-01 70.5% 87.7%
2rcfA00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.57 33.0 4.20e-01 75.3% 98.8%
2hv2A01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 29.0 3.47e-01 80.1% 76.8%
7pkwA01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 27.0 3.11e-01 80.1% 69.9%
4jg2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 41.0 3.78e-01 86.3% 87.0%
4ec6A00 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 31.0 3.57e-01 100.0% 83.5%
ECOD (84)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5041944 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.78 53.0 6.21e-01 89.0% 96.2%
4954092 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.78 54.0 6.33e-01 90.4% 99.0%
4646070 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.78 56.0 6.33e-01 91.8% 97.3%
5028149 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 58.0 6.48e-01 95.2% 98.3%
4272864 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.77 55.0 6.08e-01 86.3% 90.0%
5036294 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.77 52.0 6.15e-01 84.2% 100.0%
5050059 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 53.0 5.91e-01 84.2% 89.6%
5055028 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 53.0 6.03e-01 91.1% 93.6%
5036293 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 51.0 6.09e-01 89.7% 100.0%
4927936 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 44.0 5.73e-01 72.6% 100.0%
4934697 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 50.0 5.98e-01 82.9% 98.0%
5078763 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 47.0 5.36e-01 78.1% 82.7%
4975880 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 57.0 6.41e-01 93.2% 100.0%
5004107 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.75 55.0 6.27e-01 94.5% 100.0%
5030515 2.1.1.76 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.75 56.0 6.20e-01 92.5% 97.4%
5000190 2.1.1.111 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB 0.75 54.0 6.20e-01 95.2% 99.1%
5069581 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 51.0 5.82e-01 84.9% 91.8%
3603247 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.75 57.0 6.29e-01 93.2% 96.7%
5058918 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 55.0 6.12e-01 95.9% 96.5%
3603237 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 53.0 6.12e-01 89.0% 100.0%
5050058 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 57.0 5.31e-01 93.2% 65.7%
5035745 2.1.1.123 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB3 0.74 52.0 6.07e-01 89.0% 100.0%
4975882 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 53.0 6.08e-01 89.0% 98.2%
5064437 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 50.0 5.76e-01 85.6% 91.8%
4982872 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.74 54.0 6.15e-01 90.4% 100.0%
5032200 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.74 50.0 5.86e-01 84.2% 96.2%
4934695 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 51.0 5.71e-01 94.5% 89.6%
5066015 2.1.1.111 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB 0.74 51.0 5.89e-01 89.0% 98.1%
5030516 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.74 51.0 5.95e-01 89.0% 99.0%
4985272 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.74 51.0 5.93e-01 85.6% 99.0%
5054824 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.73 52.0 5.81e-01 90.4% 92.2%
5047682 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.73 56.0 6.15e-01 95.2% 97.5%
5035149 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 45.0 5.54e-01 76.7% 95.8%
5076489 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.73 54.0 6.01e-01 85.6% 96.5%
4974918 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.73 51.0 5.88e-01 93.2% 100.0%
3705431 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 54.0 6.06e-01 77.4% 100.0%
5062351 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 54.0 6.05e-01 90.4% 99.1%
4220176 2.1.1.289 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon, Rep-A_N 0.72 55.0 4.47e-01 93.2% 43.8%
5035148 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.72 52.0 5.12e-01 89.0% 69.7%
4940587 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.72 53.0 5.94e-01 94.5% 100.0%
4974920 2.1.1.76 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.72 49.0 5.74e-01 84.2% 100.0%
4015435 2.1.1.44 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 0.71 43.0 5.23e-01 85.6% 92.6%
3583095 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 47.0 5.66e-01 77.4% 99.0%
3733907 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.71 55.0 5.75e-01 91.8% 88.1%
4014974 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 55.0 4.38e-01 97.3% 42.1%
3263784 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 56.0 5.14e-01 83.6% 88.6%
4127161 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 47.0 5.57e-01 77.4% 100.0%
4036512 2.1.1.42 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.69 57.0 5.28e-01 87.7% 92.8%
3619317 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.69 60.0 6.02e-01 91.8% 98.6%
4599318 2.1.1.299 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S12 0.68 38.0 4.96e-01 80.8% 98.8%
4988038 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 53.0 5.76e-01 84.2% 98.3%
4932742 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 51.0 5.60e-01 85.6% 94.2%
3699533 2.1.1.42 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.67 55.0 4.87e-01 85.6% 80.5%
3585962 2.1.1.42 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.67 56.0 5.42e-01 87.7% 93.8%
3174302 2.1.1.42 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.67 55.0 5.29e-01 86.3% 87.9%
3603992 330.10.1.1 a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain › YcaO 0.67 30.0 3.68e-01 70.5% 64.2%
3514126 2.1.1.42 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.66 55.0 5.59e-01 87.0% 93.6%
3418440 2.1.1.42 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.66 54.0 5.31e-01 87.0% 95.0%
3762912 2.1.1.256 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF31101 0.66 58.0 5.38e-01 94.5% 77.8%
4216224 2.1.1.42 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.66 54.0 5.26e-01 87.0% 85.0%
3786788 2.1.1.42 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.65 54.0 4.86e-01 87.0% 91.3%
3741431 2.1.1.42 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.65 54.0 5.35e-01 87.0% 90.0%
3807630 2.1.1.42 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.65 54.0 5.01e-01 87.7% 94.4%
3407895 2.1.1.42 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.65 53.0 5.48e-01 87.7% 94.3%
4978950 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.65 53.0 5.38e-01 89.0% 86.2%
4937519 2.1.1.135 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 0.65 41.0 4.45e-01 71.2% 75.8%
3643750 2.1.1.42 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.65 53.0 4.88e-01 87.7% 90.5%
4021623 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 53.0 5.37e-01 87.0% 91.0%
3202215 2.1.1.42 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.65 53.0 4.90e-01 87.0% 90.3%
5022601 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 52.0 5.45e-01 87.7% 93.3%
3931699 2.1.1.42 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.64 53.0 5.34e-01 88.4% 90.7%
3500832 2.1.1.68 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI1_C 0.64 52.0 5.49e-01 84.9% 96.9%
3888827 2.1.1.256 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF31101 0.64 58.0 5.43e-01 97.9% 86.1%
4029921 2.1.1.42 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.63 52.0 5.08e-01 87.7% 94.4%
4029567 2.1.1.42 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.63 50.0 4.65e-01 84.9% 91.4%
5076490 2.1.1.42 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C 0.62 52.0 5.02e-01 87.7% 95.6%
5058144 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 50.0 5.12e-01 84.2% 99.3%
3598330 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 48.0 4.73e-01 82.2% 91.9%
3642408 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.62 54.0 5.46e-01 100.0% 94.5%
159268 2.1.1.6 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.60 52.0 4.64e-01 93.2% 92.7%
3593482 2.1.1.135 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 0.60 40.0 4.70e-01 74.7% 100.0%
3210094 2.1.1.289 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon, Rep-A_N 0.59 55.0 4.37e-01 100.0% 90.5%
3435849 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.59 32.0 3.94e-01 97.3% 85.2%
4131098 218.1.1.0 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.51 34.0 4.03e-01 83.6% 99.0%
D3 high residues 245-350
PDB