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LEF-3
Euk-VirUrbanus_proteus_nucleopolyhedrovirus
LEF-3__YP_009250035__Urbanus_proteus_nucleopolyhedrovirus__1675866
Identity
- Accession:
- YP_009250035 ↗
- Protein ID:
- LEF-3
- Kingdom:
- euk
Quality
81.0
mean pLDDT
Taxonomy
TaxID: 1675866
Cluster
View cluster (42 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-109
Domain cluster:
rep: IMGVR_UViG_3300029825_000003-3300029825-Ga0134835_10002589__D37-104
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05847.19 best | Baculo_LEF-3 | 83.7 | 2.20e-23 | 70.8% | 20.5% |
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gm5A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.83 | 60.0 | 5.85e-01 | 74.0% | 79.4% |
| 6rupA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.81 | 60.0 | 5.72e-01 | 77.1% | 97.3% |
| 3k7uC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.81 | 58.0 | 5.82e-01 | 75.0% | 95.9% |
| 1fguB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.80 | 58.0 | 5.65e-01 | 75.0% | 91.4% |
| 1u5kA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.79 | 57.0 | 6.16e-01 | 75.0% | 91.5% |
| 4gs3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.78 | 57.0 | 5.88e-01 | 75.0% | 96.7% |
| 4owwB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.78 | 56.0 | 5.39e-01 | 74.0% | 76.6% |
| 4dkaC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.78 | 55.0 | 5.85e-01 | 72.9% | 98.8% |
| 3k8aB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.77 | 58.0 | 5.72e-01 | 79.2% | 96.1% |
| 3fhwA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.77 | 54.0 | 5.39e-01 | 72.9% | 92.9% |
| 5gqoA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.76 | 54.0 | 5.45e-01 | 74.0% | 86.6% |
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.76 | 56.0 | 5.33e-01 | 77.1% | 90.1% |
| 1z9fA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.76 | 56.0 | 5.84e-01 | 78.1% | 97.8% |
| 3kf8A00 | 2.40.50.1040 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.75 | 55.0 | 4.24e-01 | 76.0% | 66.2% |
| 1bvsA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.75 | 49.0 | 5.84e-01 | 70.8% | 98.5% |
| 3k59A01 | 2.40.50.590 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › DNA polymerase B, N domain, beta-barrel | 0.75 | 53.0 | 5.61e-01 | 72.9% | 90.6% |
| 1o7iB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.75 | 53.0 | 5.03e-01 | 74.0% | 73.7% |
| 3u4zA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 53.0 | 5.09e-01 | 74.0% | 74.3% |
| 4jbmB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 52.0 | 5.22e-01 | 71.9% | 83.3% |
| 2k75A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 53.0 | 5.17e-01 | 74.0% | 77.7% |
| 3amuA02 | 2.40.50.1010 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.74 | 56.0 | 4.91e-01 | 79.2% | 66.9% |
| 2c9oB02 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.73 | 46.0 | 4.37e-01 | 71.9% | 54.9% |
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.73 | 46.0 | 5.43e-01 | 74.0% | 92.5% |
| 4l5tB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 51.0 | 5.29e-01 | 74.0% | 84.6% |
| 3a5zD02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 46.0 | 5.45e-01 | 72.9% | 98.4% |
| 2cqaA01 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.72 | 50.0 | 5.56e-01 | 71.9% | 95.9% |
| 4da2A01 | 2.40.50.580 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.69 | 48.0 | 5.27e-01 | 82.3% | 88.6% |
| 1xjvA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 49.0 | 4.30e-01 | 74.0% | 61.3% |
| 4jbjA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 54.0 | 5.20e-01 | 84.4% | 80.9% |
| 1b44D00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.68 | 54.0 | 5.28e-01 | 86.5% | 93.4% |
| 3hkzG00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 47.0 | 4.51e-01 | 71.9% | 97.3% |
| 1pxfA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 49.0 | 4.67e-01 | 75.0% | 82.0% |
| 6p1hB02 | 2.40.50.430 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.68 | 51.0 | 4.51e-01 | 79.2% | 80.4% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.63 | 33.0 | 3.95e-01 | 71.9% | 78.0% |
| 3u1wA02 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 36.0 | 4.23e-01 | 90.6% | 81.8% |
| 3nppA00 | 2.40.50.480 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 | 0.59 | 41.0 | 4.33e-01 | 76.0% | 80.5% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 35.0 | 3.81e-01 | 89.6% | 72.8% |
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 35.0 | 3.99e-01 | 89.6% | 81.7% |
| 3lxuX02 | 2.20.25.690 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.56 | 34.0 | 3.83e-01 | 89.6% | 80.6% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.55 | 35.0 | 3.89e-01 | 94.8% | 82.7% |
| 3p26B02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 38.0 | 3.78e-01 | 72.9% | 99.0% |
| 2lqkA00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.53 | 35.0 | 3.94e-01 | 100.0% | 91.4% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 32.0 | 3.86e-01 | 88.5% | 93.7% |
| 1vw3C01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 38.0 | 3.42e-01 | 75.0% | 74.0% |
| 7emfR01 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.51 | 42.0 | 3.51e-01 | 92.7% | 71.4% |
ECOD (93)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4446654 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.86 | 58.0 | 6.68e-01 | 74.0% | 94.3% |
| 5035327 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.84 | 58.0 | 6.19e-01 | 70.8% | 90.6% |
| 4937075 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.83 | 57.0 | 5.58e-01 | 74.0% | 64.8% |
| 386 | 2.1.1.79 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecG_wedge | 0.83 | 60.0 | 5.83e-01 | 74.0% | 78.6% |
| 3588305 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.83 | 58.0 | 6.02e-01 | 71.9% | 84.3% |
| 3838288 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.82 | 59.0 | 5.54e-01 | 75.0% | 70.4% |
| 3287532 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.81 | 58.0 | 5.77e-01 | 74.0% | 84.0% |
| 5059673 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.81 | 58.0 | 5.78e-01 | 74.0% | 81.0% |
| 5022599 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.81 | 58.0 | 5.65e-01 | 74.0% | 80.0% |
| 5005288 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.81 | 60.0 | 5.03e-01 | 77.1% | 83.9% |
| 4087511 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.81 | 58.0 | 5.52e-01 | 74.0% | 73.6% |
| 3612689 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.80 | 57.0 | 5.48e-01 | 74.0% | 100.0% |
| 4449302 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.80 | 57.0 | 5.56e-01 | 74.0% | 76.2% |
| 4052975 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.80 | 58.0 | 5.52e-01 | 75.0% | 73.6% |
| 426155 | 2.24.1.1 ↗ | beta barrels › OB-fold › probable receptor YhhM › probable receptor YhhM › DUF2500 | 0.80 | 55.0 | 6.33e-01 | 71.9% | 95.8% |
| 3228963 | 2.1.1.311 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF31223 | 0.79 | 57.0 | 5.63e-01 | 74.0% | 80.0% |
| 4960870 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.79 | 56.0 | 5.87e-01 | 74.0% | 88.8% |
| 5068809 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.79 | 58.0 | 4.31e-01 | 76.0% | 44.9% |
| 3963927 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.79 | 56.0 | 5.39e-01 | 74.0% | 75.5% |
| 5012544 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.79 | 56.0 | 5.46e-01 | 74.0% | 81.9% |
| 3907752 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.78 | 58.0 | 5.64e-01 | 77.1% | 85.7% |
| 4995606 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.78 | 56.0 | 5.79e-01 | 74.0% | 86.7% |
| 4937702 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.78 | 59.0 | 5.21e-01 | 79.2% | 81.5% |
| 4968172 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.78 | 58.0 | 4.32e-01 | 77.1% | 45.0% |
| 3838219 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.78 | 56.0 | 5.90e-01 | 74.0% | 92.9% |
| 5078973 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.78 | 55.0 | 5.93e-01 | 72.9% | 98.8% |
| 3702518 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.78 | 55.0 | 5.24e-01 | 72.9% | 100.0% |
| 5055355 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 55.0 | 5.69e-01 | 72.9% | 95.6% |
| 5033499 | 2.1.1.111 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB | 0.77 | 55.0 | 5.36e-01 | 74.0% | 77.1% |
| 5030516 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.77 | 55.0 | 5.35e-01 | 74.0% | 83.8% |
| 3705431 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 55.0 | 5.14e-01 | 74.0% | 97.4% |
| 4298544 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 55.0 | 5.03e-01 | 75.0% | 65.6% |
| 4145173 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.77 | 55.0 | 5.34e-01 | 74.0% | 77.1% |
| 4936449 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 54.0 | 6.24e-01 | 72.9% | 100.0% |
| 4395096 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.76 | 52.0 | 5.68e-01 | 74.0% | 83.7% |
| 5001820 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 54.0 | 5.39e-01 | 74.0% | 81.0% |
| 3276150 | 2.1.1.52 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Stn1 | 0.76 | 56.0 | 4.80e-01 | 77.1% | 78.7% |
| 1890287 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.76 | 54.0 | 5.45e-01 | 74.0% | 86.6% |
| 5019817 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 54.0 | 5.18e-01 | 74.0% | 74.5% |
| 4930785 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 53.0 | 5.11e-01 | 74.0% | 73.6% |
| 3216323 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.75 | 53.0 | 5.60e-01 | 72.9% | 89.4% |
| 3497958 | 2.1.1.69 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI2 | 0.75 | 55.0 | 4.61e-01 | 76.0% | 71.6% |
| 4995707 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 53.0 | 5.30e-01 | 74.0% | 84.0% |
| 3511262 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 53.0 | 5.60e-01 | 72.9% | 98.8% |
| 5028150 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.74 | 53.0 | 4.91e-01 | 74.0% | 80.8% |
| 5001821 | 2.1.1.111 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB | 0.74 | 53.0 | 5.15e-01 | 74.0% | 79.0% |
| 4951315 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.74 | 53.0 | 5.07e-01 | 74.0% | 82.7% |
| 3956619 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.74 | 53.0 | 5.35e-01 | 74.0% | 81.1% |
| 5042629 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.74 | 52.0 | 5.17e-01 | 72.9% | 85.0% |
| 3303657 | 2.1.1.284 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB3, CDC24_OB1 | 0.74 | 54.0 | 4.17e-01 | 76.0% | 57.1% |
| 5078989 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.74 | 56.0 | 4.99e-01 | 80.2% | 87.4% |
| 5040544 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 56.0 | 5.32e-01 | 79.2% | 88.2% |
| 5064367 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 52.0 | 5.41e-01 | 74.0% | 83.3% |
| 5069582 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 52.0 | 5.30e-01 | 74.0% | 87.4% |
| 4927437 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 50.0 | 5.73e-01 | 70.8% | 100.0% |
| 5078764 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 52.0 | 4.81e-01 | 74.0% | 82.5% |
| 3505867 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.73 | 50.0 | 5.62e-01 | 72.9% | 90.7% |
| 3278700 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 58.0 | 4.79e-01 | 84.4% | 54.4% |
| 3589788 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 57.0 | 5.64e-01 | 83.3% | 91.0% |
| 4271190 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.72 | 51.0 | 4.48e-01 | 74.0% | 54.3% |
| 4093810 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.71 | 51.0 | 4.87e-01 | 74.0% | 64.5% |
| 4209313 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.71 | 51.0 | 5.13e-01 | 74.0% | 76.8% |
| 4033491 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 56.0 | 5.48e-01 | 83.3% | 86.7% |
| 4179160 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.71 | 51.0 | 4.56e-01 | 74.0% | 54.6% |
| 4943166 | 2.1.1.44 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 | 0.71 | 50.0 | 5.39e-01 | 72.9% | 100.0% |
| 4963620 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.71 | 51.0 | 5.37e-01 | 75.0% | 94.1% |
| 5015768 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 55.0 | 5.48e-01 | 82.3% | 100.0% |
| 4036761 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.70 | 51.0 | 4.58e-01 | 76.0% | 72.6% |
| 4114579 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.70 | 49.0 | 5.24e-01 | 72.9% | 82.4% |
| 4886517 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.70 | 50.0 | 4.55e-01 | 74.0% | 57.6% |
| 3888828 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 57.0 | 4.78e-01 | 87.5% | 98.7% |
| 4469294 | 2.3.1.0 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like | 0.69 | 60.0 | 5.55e-01 | 92.7% | 83.3% |
| 3239340 | 2.1.1.126 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF272 | 0.69 | 50.0 | 5.36e-01 | 75.0% | 93.8% |
| 3164941 | 129.1.1.99 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › DUF4131 | 0.69 | 50.0 | 4.92e-01 | 74.0% | 93.0% |
| 4233469 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.68 | 52.0 | 4.72e-01 | 79.2% | 72.0% |
| 4936924 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.67 | 52.0 | 5.03e-01 | 80.2% | 81.9% |
| 4202594 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 51.0 | 3.47e-01 | 79.2% | 28.7% |
| 4156478 | 2.1.1.24 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE | 0.66 | 49.0 | 4.64e-01 | 78.1% | 75.7% |
| 2168051 | 2.1.1.32 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TIP49 | 0.66 | 46.0 | 4.94e-01 | 72.9% | 86.7% |
| 4985735 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.66 | 46.0 | 4.68e-01 | 72.9% | 84.2% |
| 3738365 | 2.1.1.128 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Arb1 | 0.66 | 56.0 | 5.06e-01 | 93.8% | 94.6% |
| 3797107 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 49.0 | 5.02e-01 | 81.2% | 89.5% |
| 3279407 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 49.0 | 4.72e-01 | 81.2% | 81.8% |
| 4458313 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.63 | 55.0 | 5.32e-01 | 94.8% | 99.0% |
| 4938033 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.61 | 38.0 | 3.63e-01 | 79.2% | 55.0% |
| 5062762 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.60 | 43.0 | 4.15e-01 | 75.0% | 78.2% |
| 3479868 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 39.0 | 4.10e-01 | 71.9% | 72.2% |
| 4682409 | 2007.1.12.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase | 0.59 | 42.0 | 2.98e-01 | 76.0% | 25.0% |
| 5078557 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 51.0 | 4.55e-01 | 94.8% | 89.6% |
| 3716770 | 2.1.1.135 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 | 0.56 | 45.0 | 4.39e-01 | 86.5% | 82.9% |
| 5056966 | 264.2.1.1 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac | 0.53 | 39.0 | 3.62e-01 | 77.1% | 82.5% |
| 4372267 | 868.1.1.2 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase | 0.52 | 46.0 | 3.30e-01 | 100.0% | 57.9% |
| 4063720 | 868.1.1.2 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA_triPase | 0.50 | 44.0 | 3.31e-01 | 100.0% | 59.2% |
D2
high
residues 122-257
Domain cluster:
rep: LEF-3__YP_009249949__Mocis_latipes_granulovirus__2072024__D98-243
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05847.19 best | Baculo_LEF-3 | 121.4 | 7.20e-35 | 100.0% | 40.5% |
D3
high
residues 263-377
Domain cluster:
rep: lef-3__YP_009186752__Sucra_jujuba_nucleopolyhedrovirus__1563660__D307-415
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05847.19 best | Baculo_LEF-3 | 83.7 | 2.10e-23 | 100.0% | 33.1% |