LEF-4

Euk-Vir

Drosophila_innubila_nudivirus

LEF-4__YP_009553082__Drosophila_innubila_nudivirus__2057187

Identity

73.2 mean pLDDT

Naldaviricetes› Lefavirales› Nudiviridae› Alphanudivirus› Drosophila_innubila_nudivirus

TaxID: 2057187

View cluster (54 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 67-211

PDB

Domain cluster: rep: LEF-4__YP_009051929__Penaeus_monodon_nudivirus__1529056__D14-178

D2 high residues 268-377

PDB

Domain cluster: rep: orf43_gene_product__YP_004956791__Helicoverpa_zea_nudivirus_2__1128424__D636-777

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4g1iA03	3.30.70.1770	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.54	34.0	4.05e-01	98.2%	98.6%
3m9qA01	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.53	27.0	3.27e-01	78.2%	73.6%
2ayaA00	3.30.300.150	Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › DNA polymerase III, tau subunit, domain V	0.53	36.0	3.49e-01	94.5%	60.2%
6x6aA01	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.50	40.0	3.08e-01	88.2%	78.6%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3481511	304.9.1.0 ↗	a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD	0.57	35.0	4.03e-01	85.5%	88.0%
3704633	247.1.1.1 ↗	a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B	0.50	44.0	3.47e-01	98.2%	79.6%
4016963	286.1.1.2 ↗	a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF	0.50	42.0	3.54e-01	92.7%	72.1%

D3 high residues 384-453

PDB

Domain cluster: rep: ACH96172.1_lef-4-like_protein__YP_009345982__Kallithea_virus__1654582__D403-472