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LEF-4
Euk-VirHomarus_gammarus_nudivirus
LEF-4__YP_010087721__Homarus_gammarus_nudivirus__2509616
Identity
- Accession:
- YP_010087721 ↗
- Protein ID:
- LEF-4
- Kingdom:
- euk
Quality
81.9
mean pLDDT
Taxonomy
TaxID: 2509616
Cluster
View cluster (54 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-176
Domain cluster:
rep: LEF-4__YP_009051929__Penaeus_monodon_nudivirus__1529056__D14-178
D2
high
residues 185-354
Domain cluster:
rep: orf43_gene_product__YP_004956791__Helicoverpa_zea_nudivirus_2__1128424__D636-777
D3
high
residues 356-448
Domain cluster:
rep: ACH96172.1_lef-4-like_protein__YP_009345982__Kallithea_virus__1654582__D403-472
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ckmA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.85 | 69.0 | 7.30e-01 | 83.9% | 98.8% |
| 3s24A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.84 | 68.0 | 6.77e-01 | 83.9% | 100.0% |
| 4pz7A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.81 | 70.0 | 6.01e-01 | 90.3% | 83.9% |
| 1p16B02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.77 | 67.0 | 5.90e-01 | 93.5% | 88.7% |
| 5h80B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.57 | 42.0 | 3.18e-01 | 80.6% | 93.2% |
| 3fdjA03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.54 | 43.0 | 3.87e-01 | 83.9% | 98.4% |
| 3jr7A03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.53 | 38.0 | 3.52e-01 | 75.3% | 99.2% |
| 3a58A01 | 2.30.29.90 | Mainly Beta › Roll › PH-domain like › | 0.53 | 43.0 | 3.49e-01 | 88.2% | 66.7% |
| 2a9sB00 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.50 | 34.0 | 2.95e-01 | 71.0% | 82.4% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4527009 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.84 | 57.0 | 6.87e-01 | 77.4% | 100.0% |
| 3688782 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.81 | 70.0 | 4.48e-01 | 91.4% | 32.7% |
| 3376913 | 2.1.1.28 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C | 0.80 | 69.0 | 6.47e-01 | 90.3% | 87.3% |
| None | — | 0.80 | 69.0 | 4.50e-01 | 91.4% | 40.8% | |
| 3471026 | 2.1.1.28 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C | 0.79 | 65.0 | 6.07e-01 | 87.1% | 85.1% |
| 3197689 | 2.1.1.28 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C | 0.79 | 67.0 | 5.55e-01 | 90.3% | 80.6% |
| 3784943 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.77 | 68.0 | 4.40e-01 | 93.5% | 34.3% |
| 4016604 | 2.1.1.43 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_3 | 0.57 | 44.0 | 4.28e-01 | 83.9% | 96.2% |
| 3739365 | 2.1.1.43 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_3 | 0.52 | 44.0 | 4.28e-01 | 94.6% | 94.2% |