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LEF-8

Euk-Vir

Plodia_interpunctella_granulovirus

LEF-8__YP_009330246__Plodia_interpunctella_granulovirus__262175

Identity

Accession:
YP_009330246 ↗
Protein ID:
LEF-8
Kingdom:
euk

Quality

72.7 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Plodia_interpunctella_granulovirus

TaxID: 262175

Cluster

View cluster (46 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 102-203
PDB
Domain cluster: rep: LEF-8__YP_009345850__Mythimna_unipuncta_granulovirus_B__2169746__D102-211
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04941.18 best LEF-8 160.5 8.30e-47 100.0% 13.7%
D2 high residues 353-505
PDB
Domain cluster: rep: Late_expression_facto_8__YP_009666455__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394__D385-515
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04941.18 best LEF-8 119.9 1.60e-34 94.1% 16.3%
D3 medium residues 1-101_222-276
PDB
Domain cluster: rep: lef-8__YP_009513164__Agrotis_segetum_granulovirus__10464__D3-99_217-314
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF04941.18 best LEF-8 121.9 4.00e-35 63.5% 14.1%
PF04941.18 LEF-8 37.5 1.30e-09 35.9% 7.4%
D4 medium residues 277-334
PDB
D5 medium residues 335-352_506-554
PDB
D6 medium residues 555-571_748-799
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2zihC00 1.10.3630.10 Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like 0.54 38.0 2.64e-01 76.8% 74.9%
5cm2Z00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 36.0 2.72e-01 72.5% 54.9%
4p1mB01 3.30.160.880 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Cell division protein ZapA protomer, N-terminal domain 0.52 25.0 3.01e-01 97.1% 68.9%
3p2mA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 34.0 2.40e-01 72.5% 75.4%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3722325 221.4.1.1 ↗ a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.59 42.0 3.19e-01 75.4% 49.1%
4033119 101.1.9.63 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › Bro-N 0.52 41.0 3.69e-01 88.4% 68.0%
4026339 5104.1.1.3 ↗ a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 0.50 42.0 3.37e-01 95.7% 79.7%
3575665 2004.1.1.17 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head 0.50 41.0 2.53e-01 97.1% 19.2%
D7 medium residues 572-590_716-747
PDB
D8 medium residues 591-607_681-715
PDB
Domain cluster: representative
CATH (94)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3klxB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.76 64.0 4.36e-01 94.2% 67.4%
4bfiB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.75 60.0 4.93e-01 86.5% 58.9%
1vs3A02 3.30.70.660 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain 0.74 56.0 4.06e-01 82.7% 60.4%
3rd6A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.74 64.0 4.62e-01 98.1% 85.4%
4pxeA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.74 60.0 4.56e-01 88.5% 70.9%
3otlA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.74 64.0 4.62e-01 100.0% 83.0%
7k0xA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.72 53.0 4.63e-01 78.8% 66.7%
3m86A00 2.60.40.2020 Mainly Beta › Sandwich › Immunoglobulin-like › 0.72 59.0 4.65e-01 92.3% 55.0%
3o3uN03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.72 59.0 4.64e-01 92.3% 60.4%
3eniC00 2.50.10.10 Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A 0.71 60.0 3.61e-01 96.2% 30.6%
3rt0C00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.70 61.0 4.28e-01 100.0% 72.1%
4bbyA05 3.30.300.330 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.70 57.0 4.56e-01 92.3% 64.8%
4hudA01 3.30.2000.40 Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser 0.70 60.0 4.02e-01 98.1% 40.0%
3gb0A02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 57.0 4.46e-01 90.4% 70.5%
6serA01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.70 57.0 3.73e-01 88.5% 58.8%
4pxdA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 57.0 4.35e-01 88.5% 71.3%
4ofyD02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.70 58.0 4.56e-01 92.3% 54.2%
3io1A02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 57.0 4.42e-01 92.3% 70.7%
2l25A00 3.30.2000.20 Alpha Beta › 2-Layer Sandwich › STM4215-like › 0.69 57.0 4.26e-01 96.2% 57.4%
1vr4E00 3.30.110.70 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B 0.69 54.0 4.50e-01 86.5% 84.9%
3o4oB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 56.0 4.47e-01 92.3% 61.5%
2f7vA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 56.0 4.36e-01 88.5% 74.1%
1vm0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.69 58.0 4.76e-01 92.3% 66.7%
3bczA00 3.40.830.10 Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like 0.69 56.0 3.50e-01 92.3% 87.7%
4fomA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 56.0 4.55e-01 90.4% 59.6%
5a2fA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 57.0 4.42e-01 92.3% 58.9%
6i9gA01 3.30.2400.30 Alpha Beta › 2-Layer Sandwich › Major capsid protein gp5 fold › 0.69 56.0 4.00e-01 96.2% 69.8%
4bfeA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 55.0 4.80e-01 90.4% 60.5%
4acvA00 3.30.2000.30 Alpha Beta › 2-Layer Sandwich › STM4215-like › 0.68 58.0 4.47e-01 96.2% 59.7%
1tz0B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 51.0 4.19e-01 82.7% 66.0%
4i0kA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 56.0 4.58e-01 92.3% 62.1%
3p9vA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.67 56.0 4.08e-01 100.0% 76.6%
2bkyX00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.67 54.0 4.53e-01 88.5% 69.8%
2nrqA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.67 53.0 3.94e-01 88.5% 48.2%
1vq8R00 3.90.470.10 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 0.66 55.0 4.04e-01 96.2% 94.0%
1sqeA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 49.0 3.98e-01 80.8% 59.4%
4r6uA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 54.0 4.37e-01 92.3% 54.4%
1fp5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 51.0 4.14e-01 84.6% 60.0%
3u83A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 53.0 4.32e-01 90.4% 62.4%
6d6tA01 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.66 51.0 3.42e-01 86.5% 35.2%
4gafB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 56.0 4.43e-01 98.1% 58.2%
2j5aA00 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.66 55.0 4.36e-01 94.2% 69.8%
2x1wL02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 54.0 4.39e-01 96.2% 60.0%
4exkA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 52.0 4.22e-01 90.4% 83.7%
4za1C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 50.0 4.17e-01 84.6% 64.1%
2efjA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 50.0 3.29e-01 84.6% 87.4%
6wubf01 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.64 51.0 4.22e-01 88.5% 74.5%
4djbA00 3.30.70.2870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 0.64 52.0 3.99e-01 90.4% 60.2%
3bp6B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 51.0 4.26e-01 88.5% 58.0%
2rjzA02 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.63 54.0 4.46e-01 100.0% 97.0%
3e23A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 51.0 3.44e-01 90.4% 36.4%
1twfB07 2.40.50.150 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain 0.62 49.0 3.72e-01 86.5% 88.7%
6dw1A00 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.62 54.0 3.63e-01 100.0% 41.0%
2nyiA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 50.0 4.39e-01 100.0% 70.0%
2y3uA02 3.30.980.50 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › 0.62 52.0 4.14e-01 98.1% 93.8%
4of8A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 49.0 4.05e-01 92.3% 60.2%
2ichA01 2.40.370.10 Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain 0.61 40.0 2.77e-01 88.5% 19.0%
3sm3A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 50.0 3.35e-01 92.3% 45.8%
5u1xA02 2.60.490.10 Mainly Beta › Sandwich › atp-gated p2x4 ion channel fold › atp-gated p2x4 ion channel domain 0.61 43.0 2.79e-01 76.9% 76.0%
3uebF00 3.30.300.100 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like 0.61 45.0 3.79e-01 84.6% 73.0%
3wo4C03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 51.0 4.06e-01 96.2% 57.7%
2ek0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.61 47.0 3.96e-01 84.6% 72.2%
2gjvA00 3.30.2000.10 Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like 0.60 51.0 3.86e-01 98.1% 95.6%
6vh5C03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.60 48.0 4.09e-01 90.4% 66.3%
3n5fA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 46.0 3.72e-01 90.4% 71.9%
2p8jA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 47.0 3.19e-01 88.5% 43.2%
2yqzA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 45.0 3.22e-01 90.4% 32.6%
4f0qD01 2.30.280.20 Mainly Beta › Roll › PUA domain-like › 0.59 48.0 3.11e-01 92.3% 43.1%
3a27A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 46.0 3.07e-01 86.5% 28.8%
4cyuA00 3.30.70.560 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK 0.59 50.0 3.66e-01 100.0% 39.6%
3onrJ00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.59 49.0 4.60e-01 100.0% 92.6%
2vxaA00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.59 48.0 4.52e-01 98.1% 100.0%
3d2uA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 50.0 4.18e-01 98.1% 65.2%
3pfoA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 44.0 3.50e-01 90.4% 71.1%
4e98C00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 44.0 3.55e-01 84.6% 95.2%
3fz2A00 3.30.70.1700 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U 0.57 46.0 3.56e-01 94.2% 60.9%
3lvtA03 2.60.40.2210 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 46.0 3.53e-01 94.2% 59.7%
2wyhA05 2.60.40.2210 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 46.0 3.49e-01 96.2% 63.4%
2y8yA02 3.30.70.1210 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 0.56 45.0 3.59e-01 92.3% 71.3%
4ushA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 44.0 3.54e-01 86.5% 52.4%
1txkB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 42.0 3.41e-01 88.5% 54.8%
4v19W00 3.90.470.10 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 0.55 46.0 3.36e-01 100.0% 66.9%
3ix9A00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.54 45.0 3.22e-01 96.2% 99.4%
2cc6A00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.54 46.0 4.35e-01 100.0% 98.4%
3fvcA03 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.54 40.0 3.27e-01 84.6% 97.3%
2w2sA00 3.10.460.20 Alpha Beta › Roll › VSV matrix protein › Rhabdovirus matrix protein M2 0.54 41.0 3.08e-01 90.4% 69.9%
5axgA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 39.0 2.98e-01 76.9% 42.1%
2ogkD00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.54 43.0 3.20e-01 90.4% 45.8%
2g16B00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.54 44.0 3.19e-01 96.2% 62.6%
2ptfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 44.0 3.34e-01 100.0% 91.2%
3ahpA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 43.0 3.49e-01 94.2% 99.1%
3ai4A00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.52 42.0 2.79e-01 96.2% 39.8%
3uc2A00 2.60.40.3340 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4426 0.52 36.0 2.85e-01 75.0% 43.5%
5ejlA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.52 41.0 3.19e-01 90.4% 56.5%
ECOD (91)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3617304 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.85 69.0 5.35e-01 88.5% 56.4%
3776086 306.10.1.5 ↗ a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 › PF31088 0.80 70.0 5.15e-01 96.2% 93.1%
5013821 872.1.1.0 ↗ a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like 0.78 66.0 5.00e-01 94.2% 55.8%
3842648 11.1.1.586 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CATSPERE_Ig-like 0.77 65.0 4.76e-01 92.3% 77.0%
4085092 304.12.1.2 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C 0.77 66.0 5.37e-01 94.2% 66.0%
4946915 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.77 64.0 5.00e-01 90.4% 51.4%
3807917 331.3.1.3 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.77 64.0 4.11e-01 94.2% 56.7%
3418881 304.8.1.66 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF7049 0.76 66.0 5.14e-01 96.2% 64.5%
3972051 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.75 67.0 4.98e-01 100.0% 49.2%
3696144 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.75 64.0 3.45e-01 94.2% 16.9%
3408311 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.75 59.0 4.73e-01 86.5% 55.0%
3270041 872.3.1.7 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_4 0.74 65.0 5.18e-01 100.0% 77.1%
3611742 304.42.1.1 ↗ a+b two layers › Alpha-beta plaits › Molybdenum cofactor biosynthesis protein C, MoaC › Molybdenum cofactor biosynthesis protein C, MoaC › MoaC 0.74 64.0 4.56e-01 98.1% 60.8%
3492449 256.1.1.9 ↗ a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › YbjQ_3 0.74 59.0 5.25e-01 88.5% 86.7%
4927440 304.133.1.1 ↗ a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL 0.73 63.0 5.13e-01 98.1% 83.0%
4941817 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.73 62.0 4.87e-01 96.2% 66.1%
3336175 331.3.1.11 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.73 62.0 4.19e-01 96.2% 64.2%
4376910 305.1.1.0 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase 0.72 56.0 4.55e-01 82.7% 67.4%
3881301 11.1.1.363 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 0.72 56.0 4.67e-01 84.6% 60.0%
3767485 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.72 60.0 4.43e-01 90.4% 43.8%
3202466 304.133.1.0 ↗ a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein 0.72 62.0 5.29e-01 96.2% 100.0%
3667432 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.72 58.0 4.79e-01 90.4% 64.2%
5044620 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.72 58.0 3.84e-01 90.4% 75.8%
3335123 331.3.1.3 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.71 57.0 3.69e-01 92.3% 54.9%
3875230 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.71 58.0 4.25e-01 92.3% 46.2%
5010581 310.3.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.71 55.0 4.25e-01 84.6% 53.0%
3750685 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 59.0 4.41e-01 92.3% 46.4%
3278895 304.8.1.98 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GDH_ACT3 0.70 57.0 4.03e-01 90.4% 37.5%
3241973 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 57.0 4.67e-01 92.3% 55.0%
3723425 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.70 59.0 3.61e-01 94.2% 52.6%
4257110 256.1.1.11 ↗ a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › DUF2536 0.70 56.0 5.36e-01 88.5% 100.0%
3275694 872.3.1.6 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_3 0.70 57.0 4.64e-01 92.3% 78.0%
3973731 304.8.1.98 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GDH_ACT3 0.70 57.0 4.16e-01 92.3% 40.7%
3863526 11.1.1.108 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.70 56.0 4.38e-01 90.4% 56.5%
3603456 304.8.1.82 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF27325 0.69 58.0 4.90e-01 96.2% 71.1%
5028535 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 56.0 4.28e-01 92.3% 50.4%
3938171 11.1.1.3 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.69 57.0 4.55e-01 92.3% 56.2%
None — 0.69 56.0 4.18e-01 90.4% 44.4%
4054495 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.69 58.0 4.74e-01 96.2% 56.0%
3407001 11.1.1.108 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.69 57.0 4.50e-01 96.2% 53.9%
4245606 304.8.1.98 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GDH_ACT3 0.68 56.0 4.05e-01 92.3% 39.4%
1758364 11.1.1.108 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.68 56.0 4.45e-01 92.3% 61.1%
4927424 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 56.0 4.21e-01 92.3% 53.3%
4603167 872.3.1.1 ↗ a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_1 0.68 56.0 4.47e-01 92.3% 87.6%
4127809 328.1.1.1 ↗ a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba 0.68 55.0 4.59e-01 88.5% 67.4%
3917076 11.1.1.909 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Gpi16 0.68 54.0 3.58e-01 90.4% 40.2%
4973765 3156.1.1.32 ↗ beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Inhibitor_I42 0.68 55.0 4.50e-01 92.3% 59.0%
3914568 11.1.1.108 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.67 54.0 4.30e-01 88.5% 55.2%
4559464 11.1.1.1323 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set, C2-set_3 0.67 55.0 3.54e-01 90.4% 24.2%
2731314 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.67 49.0 4.12e-01 78.8% 60.7%
3942216 11.1.5.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PF27328 0.67 56.0 4.04e-01 98.1% 67.9%
4973645 11.1.1.130 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Inhibitor_I42 0.66 57.0 4.83e-01 100.0% 71.1%
3878477 11.1.1.108 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.66 55.0 4.22e-01 94.2% 46.7%
3759752 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.66 55.0 4.44e-01 96.2% 58.1%
3798241 11.12.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like 0.66 50.0 3.29e-01 80.8% 40.5%
4988254 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.65 51.0 3.61e-01 90.4% 56.1%
3227536 11.12.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.65 50.0 3.25e-01 80.8% 40.9%
3972055 11.1.1.410 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › BatD 0.65 57.0 4.39e-01 100.0% 53.3%
5032446 328.1.1.0 ↗ a+b two layers › IF3-like › AlbA-like › AlbA-like 0.65 51.0 4.09e-01 84.6% 57.0%
3862727 11.1.1.3 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.65 53.0 4.28e-01 92.3% 79.0%
3921175 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 53.0 4.28e-01 90.4% 60.0%
3783225 2003.1.5.73 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.65 53.0 3.49e-01 90.4% 28.4%
5068348 11.12.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like 0.65 54.0 3.82e-01 94.2% 42.4%
3581195 11.12.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.65 50.0 3.36e-01 82.7% 53.3%
3863596 11.1.1.3 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.64 55.0 4.02e-01 96.2% 46.4%
3896288 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.64 53.0 4.41e-01 98.1% 54.0%
1725 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.64 54.0 4.32e-01 98.1% 59.8%
3174334 2003.1.5.73 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.64 49.0 3.22e-01 86.5% 24.3%
3992067 11.12.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.63 49.0 3.37e-01 80.8% 42.2%
3623538 873.1.1.5 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB 0.63 53.0 3.64e-01 94.2% 37.2%
2388936 11.12.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD,Neur_chan_memb 0.63 48.0 3.05e-01 80.8% 32.3%
5083279 11.31.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Beta-galactosidase LacA beta-sandwich domain › Beta-galactosidase LacA beta-sandwich domain 0.62 46.0 4.13e-01 80.8% 58.6%
143936 2003.1.5.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.62 49.0 3.24e-01 86.5% 45.2%
3735094 328.1.1.0 ↗ a+b two layers › IF3-like › AlbA-like › AlbA-like 0.62 51.0 3.41e-01 92.3% 34.1%
4940026 4081.1.1.17 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › DUF7345 0.61 51.0 3.55e-01 94.2% 58.9%
3481119 11.12.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like 0.61 47.0 3.06e-01 80.8% 40.0%
5027270 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.61 47.0 3.38e-01 90.4% 61.1%
3279365 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.60 47.0 3.16e-01 86.5% 84.7%
3473096 11.12.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.60 49.0 3.32e-01 96.2% 35.5%
3221989 11.12.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.60 50.0 3.31e-01 90.4% 41.0%
3596001 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 46.0 3.61e-01 88.5% 51.7%
5024124 304.15.1.0 ↗ a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain 0.59 52.0 4.49e-01 98.1% 73.8%
1312442 12.1.1.43 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_38 0.58 47.0 3.73e-01 94.2% 66.4%
3711517 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 46.0 3.60e-01 92.3% 65.0%
4118093 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.57 47.0 3.48e-01 100.0% 87.7%
4538883 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 45.0 3.79e-01 92.3% 62.1%
3776151 11.1.5.94 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Gpi16 0.56 44.0 3.32e-01 100.0% 36.4%
4663897 12.1.1.43 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_38 0.55 44.0 3.48e-01 92.3% 70.0%
3906365 11.12.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.55 42.0 2.93e-01 92.3% 35.5%
4881129 11.12.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.53 40.0 3.08e-01 90.4% 50.7%
3489671 309.1.1.0 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase 0.51 39.0 2.76e-01 92.3% 35.8%
D9 medium residues 608-680
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04941.18 best LEF-8 91.0 9.00e-26 98.6% 9.2%
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4fpwB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.73 56.0 4.35e-01 83.6% 70.8%
5t8uB01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.69 55.0 3.80e-01 87.7% 49.2%
3l1aA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.68 55.0 3.86e-01 86.3% 50.9%
1wqwA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.66 53.0 3.92e-01 86.3% 60.4%
6iomB01 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.66 36.0 3.60e-01 86.3% 49.4%
4eaeA00 2.60.40.4170 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 51.0 3.85e-01 84.9% 74.5%
2k5gA01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.66 50.0 3.71e-01 80.8% 70.6%
4frwA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 50.0 4.61e-01 82.2% 64.6%
3wirA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.65 58.0 3.99e-01 100.0% 69.8%
1dr9A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 50.0 4.66e-01 86.3% 72.6%
3rrkA03 3.30.70.2750 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 44.0 4.46e-01 71.2% 73.0%
2p0lA00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.65 57.0 3.92e-01 100.0% 68.4%
1r62A00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.64 56.0 4.63e-01 100.0% 61.0%
3oq3B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 53.0 4.75e-01 91.8% 72.8%
1vqzA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.64 51.0 3.57e-01 87.7% 52.5%
6efyA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 50.0 4.60e-01 87.7% 72.4%
4fppA02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.63 55.0 4.47e-01 97.3% 66.4%
6ue9L02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 51.0 4.45e-01 94.5% 67.2%
2ivfC00 2.60.40.1190 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 53.0 3.75e-01 91.8% 55.6%
2e5aA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.62 50.0 3.58e-01 90.4% 55.1%
4q9bA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 48.0 4.42e-01 86.3% 71.3%
1g0dA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 49.0 4.09e-01 89.0% 99.3%
2mklC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 50.0 4.49e-01 90.4% 70.5%
1i82A00 2.60.40.1190 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 52.0 3.84e-01 93.2% 54.5%
2p4bB02 3.30.200.100 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain 0.61 47.0 4.28e-01 94.5% 61.2%
4bxiA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.60 52.0 4.19e-01 100.0% 58.9%
1xdxA01 3.30.1140.40 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Tctex-1 0.58 45.0 4.14e-01 86.3% 78.0%
8ediA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 45.0 4.11e-01 86.3% 98.1%
2ednA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 44.0 3.82e-01 84.9% 63.6%
4iofB01 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.57 43.0 3.39e-01 83.6% 46.7%
4brcA02 3.30.420.150 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 0.57 38.0 2.77e-01 86.3% 22.4%
5akpA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.56 42.0 3.46e-01 79.5% 77.5%
6ef7A00 2.60.40.4140 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 44.0 3.84e-01 91.8% 62.9%
1vs3A02 3.30.70.660 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain 0.56 42.0 3.45e-01 83.6% 62.5%
1xauA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 43.0 3.92e-01 87.7% 74.0%
6on6A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 44.0 3.97e-01 90.4% 75.0%
3go9A02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.55 42.0 3.08e-01 83.6% 40.1%
5t89X01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 40.0 3.92e-01 83.6% 69.9%
3hr6A02 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 44.0 3.54e-01 91.8% 51.0%
3kd4A03 2.60.120.1130 Mainly Beta › Sandwich › Jelly Rolls › 0.54 43.0 3.61e-01 91.8% 65.7%
6u6pA01 3.30.1070.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle; Chain A › Cell division topological specificity factor MinE 0.54 39.0 3.83e-01 76.7% 100.0%
3frnA01 3.10.129.70 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › 0.54 40.0 3.29e-01 80.8% 77.7%
4q7aC02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 41.0 3.63e-01 83.6% 65.7%
2dpnA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 40.0 2.85e-01 82.2% 52.0%
7t4dA01 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.54 41.0 2.87e-01 89.0% 67.9%
3o6qA02 3.30.70.2720 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 41.0 3.60e-01 86.3% 73.7%
1hn0A04 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.52 39.0 3.40e-01 83.6% 63.1%
3anzC00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.52 42.0 2.92e-01 95.9% 57.5%
5xoyB02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 40.0 3.55e-01 84.9% 65.4%
3cddA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.51 43.0 3.26e-01 94.5% 45.1%
2itmB02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.50 38.0 2.77e-01 84.9% 39.3%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4215475 109.2.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.71 64.0 3.64e-01 100.0% 31.5%
3581781 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.68 57.0 5.25e-01 93.2% 76.8%
3412686 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.68 54.0 4.25e-01 86.3% 48.7%
3527204 11.1.1.1070 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF27822 0.67 56.0 4.13e-01 90.4% 37.8%
3404910 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.67 56.0 4.64e-01 90.4% 57.6%
3846973 11.1.1.3 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.67 53.0 4.79e-01 86.3% 75.0%
3528892 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.67 56.0 3.84e-01 91.8% 56.8%
3543172 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 55.0 4.40e-01 90.4% 48.3%
3873815 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 55.0 4.47e-01 90.4% 51.9%
3272801 331.3.1.3 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.66 50.0 3.16e-01 80.8% 30.9%
3542668 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.66 52.0 4.68e-01 84.9% 74.0%
3025552 11.1.1.96 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.66 54.0 4.78e-01 91.8% 69.4%
3938814 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.66 55.0 4.82e-01 91.8% 67.3%
3514307 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.66 53.0 4.23e-01 87.7% 51.0%
3238456 11.1.1.3 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.65 54.0 4.73e-01 89.0% 67.6%
3572244 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.64 53.0 4.77e-01 90.4% 75.0%
3905967 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.64 53.0 4.80e-01 90.4% 72.0%
3792375 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.64 53.0 4.61e-01 91.8% 65.2%
3394336 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.64 53.0 4.33e-01 93.2% 57.9%
3895930 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 50.0 4.62e-01 86.3% 70.5%
3763879 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.64 51.0 4.66e-01 89.0% 74.0%
5014200 4081.1.1.0 ↗ beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.63 50.0 3.77e-01 84.9% 45.9%
4945188 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 53.0 4.59e-01 93.2% 65.2%
3913201 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.63 51.0 4.58e-01 87.7% 70.0%
3478728 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 54.0 4.62e-01 94.5% 69.6%
3575560 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.62 53.0 4.57e-01 94.5% 63.5%
3626360 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.62 50.0 4.39e-01 87.7% 62.7%
4270552 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.62 51.0 4.55e-01 89.0% 69.0%
3923723 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.61 50.0 4.45e-01 89.0% 64.8%
5066413 304.126.1.0 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.61 42.0 4.12e-01 71.2% 65.0%
3478309 11.1.1.3 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.60 46.0 4.09e-01 82.2% 69.5%
3842648 11.1.1.586 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CATSPERE_Ig-like 0.60 51.0 4.17e-01 93.2% 57.8%
3889151 11.1.1.587 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › VEGFR1-3_N_Ig-like 0.60 50.0 4.24e-01 91.8% 57.5%
3334395 12.1.1.5 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-amyl_C2 0.60 38.0 4.37e-01 91.8% 90.6%
3936485 11.1.1.97 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.59 47.0 4.31e-01 89.0% 72.0%
3786241 864.1.1.2 ↗ a+b two layers › DLC › DLC › DLC › Tctex-1 0.59 44.0 4.02e-01 82.2% 72.8%
3607101 309.1.1.0 ↗ a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase 0.59 45.0 3.31e-01 86.3% 43.0%
973647 11.13.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Leukocidin-like › Leukocidin-like › Leukocidin 0.59 47.0 3.36e-01 90.4% 83.3%
3508836 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 46.0 3.89e-01 86.3% 69.6%
3993345 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.58 47.0 4.27e-01 89.0% 71.0%
4048714 812.1.1.1 ↗ a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE 0.58 43.0 4.15e-01 80.8% 94.1%
4966310 223.8.1.0 ↗ a+b three layers › Profilin-like › LapD periplasmic domain › LapD periplasmic domain 0.57 41.0 3.74e-01 74.0% 69.1%
3245484 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 47.0 3.97e-01 97.3% 71.1%
1505699 812.1.1.1 ↗ a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE 0.56 42.0 3.98e-01 80.8% 96.6%
4328537 812.1.1.1 ↗ a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE 0.55 42.0 4.01e-01 82.2% 94.1%
3779151 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.55 40.0 3.59e-01 82.2% 72.2%
1436 11.1.1.16 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_N 0.54 46.0 3.86e-01 98.6% 100.0%
3517977 864.1.1.2 ↗ a+b two layers › DLC › DLC › DLC › Tctex-1 0.54 41.0 4.08e-01 86.3% 97.5%
4940958 223.8.1.0 ↗ a+b three layers › Profilin-like › LapD periplasmic domain › LapD periplasmic domain 0.53 40.0 3.70e-01 82.2% 72.6%
4182228 812.1.1.1 ↗ a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE 0.52 39.0 3.79e-01 83.6% 97.6%
3597065 859.1.1.0 ↗ a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 0.52 41.0 3.14e-01 86.3% 62.4%
4859810 3517.1.1.1 ↗ a+b complex topology › Polymerase acidic protein › Polymerase acidic protein › Polymerase acidic protein › Flu_PA 0.51 38.0 2.62e-01 82.2% 21.7%
4000270 382.1.1.6 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › QVR 0.50 37.0 3.42e-01 82.2% 78.0%
3869391 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 40.0 3.68e-01 89.0% 69.0%