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LEF-8
Euk-VirMythimna_unipuncta_granulovirus_B
LEF-8__YP_009345850__Mythimna_unipuncta_granulovirus_B__2169746
Identity
- Accession:
- YP_009345850 ↗
- Protein ID:
- LEF-8
- Kingdom:
- euk
Quality
77.7
mean pLDDT
Taxonomy
TaxID: 2169746
Cluster
View cluster (46 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-101_227-317
Domain cluster:
rep: lef-8__YP_009513164__Agrotis_segetum_granulovirus__10464__D3-99_217-314
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04941.18 best | LEF-8 | 90.9 | 9.20e-26 | 50.5% | 13.4% |
| PF04941.18 | LEF-8 | 66.6 | 2.20e-18 | 47.9% | 12.3% |
D2
high
residues 593-704
Domain cluster:
rep: late_expression_factor-8__YP_025188__Neodiprion_sertifer_nucleopolyhedrovirus__111874__D585-690
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04941.18 best | LEF-8 | 90.4 | 1.30e-25 | 100.0% | 15.2% |
D3
medium
residues 102-211
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04941.18 best | LEF-8 | 169.2 | 1.90e-49 | 100.0% | 14.7% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p34A02 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.64 | 41.0 | 4.32e-01 | 95.5% | 73.2% |
| 4qxaB00 | 2.30.29.230 | Mainly Beta › Roll › PH-domain like › | 0.55 | 38.0 | 3.51e-01 | 70.9% | 98.6% |
| 1uypA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 45.0 | 3.38e-01 | 90.0% | 81.6% |
| 1mdaH00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 44.0 | 3.09e-01 | 87.3% | 50.8% |
| 1mg2A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 43.0 | 3.02e-01 | 87.3% | 49.5% |
| 3kyaA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 46.0 | 3.22e-01 | 98.2% | 92.1% |
| 5ji7A00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.52 | 37.0 | 3.00e-01 | 72.7% | 89.4% |
| 2z13A00 | 2.30.29.170 | Mainly Beta › Roll › PH-domain like › | 0.51 | 39.0 | 3.88e-01 | 82.7% | 86.3% |
| 2eo6A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.51 | 35.0 | 3.57e-01 | 71.8% | 94.4% |
| 2psbA00 | 3.50.90.10 | Alpha Beta › 3-Layer(bba) Sandwich › YerB-like fold › YerB-like | 0.50 | 41.0 | 3.08e-01 | 90.0% | 51.0% |
| 3loyA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 39.0 | 4.09e-01 | 94.5% | 92.1% |
| 2z4hA01 | 2.40.128.300 | Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain | 0.50 | 33.0 | 3.85e-01 | 89.1% | 94.9% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3619159 | 292.2.1.5 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Polo_box_3 | 0.63 | 37.0 | 4.02e-01 | 95.5% | 68.4% |
| 3592082 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 36.0 | 3.95e-01 | 90.0% | 71.1% |
| 3189020 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.59 | 44.0 | 2.78e-01 | 76.4% | 93.1% |
| 3168829 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.59 | 48.0 | 3.35e-01 | 86.4% | 63.4% |
| 3993048 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.59 | 41.0 | 4.11e-01 | 95.5% | 70.9% |
| 3632334 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.59 | 43.0 | 2.87e-01 | 76.4% | 85.5% |
| 3379082 | 2004.1.1.433 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 | 0.59 | 43.0 | 2.70e-01 | 76.4% | 96.9% |
| 1275015 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.58 | 40.0 | 4.14e-01 | 95.5% | 76.5% |
| 3924601 | 5.1.5.18 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Vps16_N | 0.57 | 45.0 | 3.28e-01 | 86.4% | 61.5% |
| 3383213 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.56 | 44.0 | 3.26e-01 | 85.5% | 65.2% |
| 4946568 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 41.0 | 2.54e-01 | 80.9% | 22.1% |
| 3999814 | 3131.1.1.1 ↗ | a+b two layers › FYR domain › FYR domain › FYR domain › FYRN,FYRC | 0.53 | 46.0 | 4.02e-01 | 98.2% | 82.9% |
| 3719107 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.52 | 38.0 | 2.44e-01 | 74.5% | 30.5% |
| 174442 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.52 | 46.0 | 3.20e-01 | 98.2% | 90.4% |
| 3577955 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.52 | 38.0 | 2.92e-01 | 78.2% | 61.8% |
| 3794863 | 10.1.1.8 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY | 0.52 | 38.0 | 3.10e-01 | 76.4% | 88.5% |
| 3259583 | 220.1.1.86 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N | 0.52 | 33.0 | 3.89e-01 | 76.4% | 90.0% |
| 3284774 | 321.1.1.11 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › DUF2126 | 0.51 | 37.0 | 2.59e-01 | 77.3% | 57.4% |
| 3094739 | 220.1.1.14 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom | 0.51 | 39.0 | 3.60e-01 | 80.9% | 72.1% |
| 4002532 | 5.1.2.30 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › RAB3GAP2_N | 0.50 | 44.0 | 3.97e-01 | 96.4% | 89.7% |
| 3226910 | 2484.1.1.200 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH | 0.50 | 37.0 | 2.94e-01 | 76.4% | 64.1% |
| 3057477 | 220.1.1.146 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_NDK7_N | 0.50 | 37.0 | 4.06e-01 | 85.5% | 95.6% |
| 3169357 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.50 | 33.0 | 3.34e-01 | 86.4% | 66.4% |
D4
medium
residues 366-501
Domain cluster:
rep: Late_expression_facto_8__YP_009666455__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394__D385-515
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04941.18 best | LEF-8 | 128.8 | 3.20e-37 | 100.0% | 18.6% |
D5
medium
residues 530-592_706-792
Domain cluster:
rep: KU935715.1__AND75470.1__ME3_309__00309__D264-326_420-534
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04941.18 best | LEF-8 | 68.3 | 6.60e-19 | 42.0% | 8.5% |
| PF04941.18 | LEF-8 | 40.5 | 1.60e-10 | 22.0% | 4.2% |
D6
medium
residues 793-857